Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe19g00086 | ATGGGAGACAACAATAACACCAACAGAGGCCTTGTTTCGGCCAACGCCGCCGCTAATTCCAACCGGAACAACAACGGCAGCCACCACAAGAAGCCGGAGTGGCTGCAGCAGTACGATCTAATTGGGAAGATCGGAGAGGGTACCTATGGCCTTGTGTTCCTTGCTAAAATCAAACCCCCTTCGCCCAGTCGCGGTAAGTCCATTGCCATCAAGAAGTTCAAGCAATCCAAGGACGGTGATGGCGTCTCCCCAACTGCCATCCGCGAAATTATGTTACTGCGGGAAATAACACACGAGAATGTCGTCAAGCTTGTAAATGTTCATATCAATCATACAGATATGTCGCTGTATCTAGCTTTCGATTATGCTGAACATGACCTTTATGAAATCATTAGACATCATCGGGACAAGGCTAACCATCCCCTTAATCAGTACACCGTTAAATCTTTGCTTTGGCAACTTCTCAATGGATTGAACTATCTCCACAGTAATTGGATCATTCATCGTGATTTAAAGCCATCGAATATTTTGGTAATGGGTGAAGGAGAAGAACAAGGATTGGTTAAAATAGCTGATTTTGGACTTGCAAGAATATACCAAGCTCCCTTGAAGCCATTATCTGAAAATGGAGTTGTCGTCACCATTTGGTATCGTGCACCTGAACTTCTCCTTGGAGCAAAACACTATACTAGTGCTGTTGATATGTGGGCTGTTGGATGTATTTTTGCTGAGCTCTTGACACTGAAGCCATTGTTTCAAGGGCAAGAAGTCAAAGGGAATCCAAATCCTTTCCAGCTTGATCAACTCGACAAGATATTTAAGGTTTTAGGCCATCCCACGGTAGAGAAGTGGCCAACACTTGCTAATCTTCCACATTGGCAACAAGATTTACAGCATATACAGGGACATAAATATGACACTGCTGGATTGTTTAATGTTGTGCACCTTTCTCCAAAAAGTCCTGCGTATGATCTTCTATCCAAAATGCTTGAGTATGATCCTCGAAAGCGTATAACAGCAGCCCAAGCTCTTGAGCATGAGTATTTTCGATTAGAACCACTGCCAGGATACAATGCTCTAGTACCAATTCAACCTGGAGAGAAGGTCATTAATTATCCAACTCGCCCTGTGGACACAACCACGGATTTTGAGGGAACAACTAGCCTTCAGCCCCCACAAACGGCGTCTGGAAATGCTGTAAACATGCAAGGTGCTCATGCTGTGGCAGGCAGATCTGTCCCTCGGCCGATGATAGGAGTTGGCATGCCAAGGATGCCGCCTCAGGGCATGGGTCCTTATAACCTTGCATCTCAGGCTGGGATGGGCATGAATCCTGGTGGCATCCCTATGCAGCGTGGTGTTTCTGCTCAAGCTCATCAGCAACAACAGGTTGTTAAGGAGAAAAGATCCAGGAATGGGAATGCCAGGCTATCCTCCACAGCAGAAACAACAAAGACGCTACTGAGTGGTATCAGGAAGATCAGAAATTACTTGTACGCTTCGTCAAAATTTGTCCACGCCATCTTACAAAGCCAAGTATCGATTGATGTTAATACATCTCTCAACTTGCTTGCCTGCTCGGTTGCTGCACAGATCAAATGGGAGAAGGCAAGAATTGCTCCCGGGCATCAGTTTTCTTGA | 1641 | 45.52 | MGDNNNTNRGLVSANAAANSNRNNNGSHHKKPEWLQQYDLIGKIGEGTYGLVFLAKIKPPSPSRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHTDMSLYLAFDYAEHDLYEIIRHHRDKANHPLNQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEQGLVKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGQEVKGNPNPFQLDQLDKIFKVLGHPTVEKWPTLANLPHWQQDLQHIQGHKYDTAGLFNVVHLSPKSPAYDLLSKMLEYDPRKRITAAQALEHEYFRLEPLPGYNALVPIQPGEKVINYPTRPVDTTTDFEGTTSLQPPQTASGNAVNMQGAHAVAGRSVPRPMIGVGMPRMPPQGMGPYNLASQAGMGMNPGGIPMQRGVSAQAHQQQQVVKEKRSRNGNARLSSTAETTKTLLSGIRKIRNYLYASSKFVHAILQSQVSIDVNTSLNLLACSVAAQIKWEKARIAPGHQFS | 546 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 665359 | 675610 | - | Cp4.1LG19g00860.1 | Cpe19g00086 | 485494 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe19g00086 | 546 | SUPERFAMILY | Protein kinase-like (PK-like) | 33 | 350 | IPR011009 | - | |
Cpe19g00086 | 546 | SMART | serkin_6 | 38 | 349 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe19g00086 | 546 | Gene3D | Phosphorylase Kinase; domain 1 | 17 | 120 | - | - | |
Cpe19g00086 | 546 | ProSiteProfiles | Protein kinase domain profile. | 38 | 349 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe19g00086 | 546 | Gene3D | Transferase(Phosphotransferase) domain 1 | 121 | 360 | - | - | |
Cpe19g00086 | 546 | Pfam | Protein kinase domain | 38 | 349 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe19g00086 | 546 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 166 | 178 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe19g00086 | 546 | ProSitePatterns | Protein kinases ATP-binding region signature. | 44 | 72 | IPR017441 | GO:0005524 | |
Cpe19g00086 | 546 | CDD | STKc_CDK8_like | 37 | 349 | - | - | |
Cpe19g00086 | 546 | PANTHER | CELL DIVISION PROTEIN KINASE | 26 | 469 | - | - | |
Cpe19g00086 | 546 | PANTHER | CYCLIN-DEPENDENT KINASE E-1 | 26 | 469 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe19g00086 | Cpe-Chr19:665359 | Cpe01g01276 | Cpe-Chr1:7675157 | 1.07E-75 | dispersed | |
Cpe19g00086 | Cpe-Chr19:665359 | Cpe11g00061 | Cpe-Chr11:324146 | 3.34E-81 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63015 | PF00069 | Pkinase | 3.40E-68 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe19g00086 | K02208 | - | csv:101203984 | 846.654 |