Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00135 ATGGGAGCCTGCTGCACAAAAGATTCAATCAATGGAGGAGGAGGAGGAGAGTACATGACCCATGATAAGGATGAGAGGGATTCCAACCGGGGAGATGATGGAGCAGAGATTCGTCGTGGCGACGACGGAGCCATCGTTCGACTCCATGGATCCTCTGCGTTCATATCAATGTATACTCAACGAGGAAGAAAAGGAATCAATCAAGATGCAATGACGGTTTGGGAGGATTTCTCAGGGGAGAAAGGTTTGGTGTTTTCTGGAGTTTTTGATGGCCATGGTCCGTTTGGTCATAGGGTTGCTCGCCATGCACGAGACATGCTGCCCTCCAAGCTCTCCAAGGCTATCAAAAAGCAGCAGCAGCCATCACATCTCCAAAATGGGGTTTCTAAAGCTTCTGTTCAACCAAACAACAAGGAAGGAAATCAACGAAATCCATTGGTTTCAAGATGGGAAGCTGCTTTTGAAGAAGCTTATACGGATTTTGATCGAGACCTCGGCTTTGATTCATCTATTGATTGTTTCTGCAGTGGAACAACAGCCATGTCCATTATCAAACAGGGAGAGCATTTGGTGGTTGCAAATGTGGGTGACTCCCGGGCGGTTCTATGCACCAGAGGAGACAACCATCAACATATTCCGATCCAATTAACAGCTGACCAGAAACCAAATGTTCCAAGCGAAGCAGAAAGAATAAAGAAATGCCAGGGGAGAATCACAACAGATAAAGAAGAACCAGATATTTTCAGAGTATGGGTACCAGATGCAGATTATCCTGGCCTCGCCATGTCAAGATCCTTTGGAGATTTTTGCCTCAAGGATTACGGCCTCATCCCAACCCCTGAAGTCGCCTACAGAAAACTCACAAGAAAAGACGAGTTCATCGTTCTAGCAACAGATGGAATCTGGGATGTACTGACGAACAAGCAAGTAATCAACATAGTTGCTTCAGCAAAGAACCGATCCATGGCGGCGAAATTAGTAGTGAAACTAGCAGCACGAGAATGGAAACGCAAATTTATAGGGTTGACGATCGACGACTGTACAGTGATTTGCTTGTTCTTCAAGAATCCACCATTGCTGAGCAAATCAATGACGAACGTAGGGCGGCGGAGCATGAGAAGCCATCCGGAACTGGCATTTTCAAGAAGCTGTAGATCCATGGGGATCGACAGAAAAATAGGAGAAGAAGAAGGTGAATCAGTGAATAGAGAATCAAAGGAAGATCGGAAGGGTGTAAAAGTATTAAACAGAGTGAATTCAATGATGGGGATTTCACGAACCACTAGGAGTTTGAGCCACAATCAGAAAGCGCCCAAGTTTTTCTATGAAATTGAAGCTCGCGAAAGCGGCACTGCAATGGCGAAGGGCAAGAAGAAGAAGAACTAA 1386 45.53 MGACCTKDSINGGGGGEYMTHDKDERDSNRGDDGAEIRRGDDGAIVRLHGSSAFISMYTQRGRKGINQDAMTVWEDFSGEKGLVFSGVFDGHGPFGHRVARHARDMLPSKLSKAIKKQQQPSHLQNGVSKASVQPNNKEGNQRNPLVSRWEAAFEEAYTDFDRDLGFDSSIDCFCSGTTAMSIIKQGEHLVVANVGDSRAVLCTRGDNHQHIPIQLTADQKPNVPSEAERIKKCQGRITTDKEEPDIFRVWVPDADYPGLAMSRSFGDFCLKDYGLIPTPEVAYRKLTRKDEFIVLATDGIWDVLTNKQVINIVASAKNRSMAAKLVVKLAAREWKRKFIGLTIDDCTVICLFFKNPPLLSKSMTNVGRRSMRSHPELAFSRSCRSMGIDRKIGEEEGESVNRESKEDRKGVKVLNRVNSMMGISRTTRSLSHNQKAPKFFYEIEARESGTAMAKGKKKKN 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1057562 1063966 - Cp4.1LG19g01340.1 Cpe19g00135 485543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00135 461 MobiDBLite consensus disorder prediction 116 143 - -
Cpe19g00135 461 CDD PP2Cc 54 354 IPR001932 -
Cpe19g00135 461 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 399 - -
Cpe19g00135 461 PANTHER ALPHABET, ISOFORM E-RELATED 1 399 - -
Cpe19g00135 461 ProSiteProfiles PPM-type phosphatase domain profile. 54 354 IPR001932 -
Cpe19g00135 461 MobiDBLite consensus disorder prediction 1 38 - -
Cpe19g00135 461 Gene3D - 46 356 IPR036457 -
Cpe19g00135 461 SUPERFAMILY PP2C-like 51 357 IPR036457 -
Cpe19g00135 461 Pfam Protein phosphatase 2C 78 331 IPR001932 -
Cpe19g00135 461 SMART PP2C_4 38 352 IPR001932 -
Cpe19g00135 461 MobiDBLite consensus disorder prediction 18 38 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00979 Cpe19g00135 CCT
Cpe10g00979 Cpe19g00135 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe17g00991 Cpe-Chr17:7521732 Cpe19g00135 Cpe-Chr19:1057562 3.47E-103 dispersed
Cpe19g00135 Cpe-Chr19:1057562 Cpe04g00768 Cpe-Chr4:7384328 3.60E-106 dispersed
Cpe10g00979 Cpe-Chr10:5533633 Cpe19g00135 Cpe-Chr19:1057562 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00135 - - cpep:111780962 937.176