Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe19g00148 | ATGCCGGAATTCGACGGCGGCGACCCTTCACCGGAGGGGATTCTGTTCGGAAAATATGAACTCGGGAAGCTTTTAGGCCGTGGAGCCTTCGCGAAGGTCTACCATGGCAGAAACGTTCATACAGGAAAAAGCGTTGCGATTAAAGCTGTTAACAAACTCAAGGTCTTAAATGGCGGTTTCACGGCGCACGTTAAGAGAGAAATTGATATCATGCGCCGCCTCCGCCATCCCAACGTCGTTCGTCTTTTCGAAGTTCTTGCAACGAAGACGAAGATTTATTTCGTAATGGAATTCGCCAAAGGCGGAGAGCTTTTCACGAAGGTTTCCAAAGGACGATTCAGTGAGAATCTCAGCCGTCGATATTTTCAGCAATTGATTACCGCCGTTGGATACTGTCATTCCAGAGGAATTTTTCATCGCGATTTGAAACCGGAAAATCTCCTTCTCGATGAAAATTTCGATCTCAGAGTTTCGGATTTCGGACTCGGTGCTTTAACGGATCAGATTCGACCCGACGGATTGCTTCATACACTCTGTGGAACTCCGGCGTACGTCGCGCCGGAGATTCTCGCGAAGAAAGGCTACGACGGCGCGAAGATCGACGTCTGGTCTTGCGGTATAATCCTCTATGTTCTTACTGCCGGATTTCTTCCGTTTAATGATTCCAATTTAATGGCGATGTATCGGAAGATTTACAGAGGCGATTTCCGGTGTCCGAAATGGACGTCGCCAGATCTCCGGCGGTTTTTATCGCGGCTTTTGGATACGAATCCGGAGACGAGGATCACCGTCGATGAGATTCATCAAGATCCGTGGTTCAGAAAGGGATTTCAAGAGGAGAAGATTCAATTCGAGGATTATTCGGTTTCAGAGCTTTACGGCGATATGAACAATGCGAAATGTTTGAATGCTTTTGATTTAATTTCGTTCTCTCTTTGCTTCGATTCAACTGGATTGATCAACGAGACGGAATTTTCGTCCGATGTTGAGAGGTTTCTCTCCGCCGAATCGCCGGAGAAGATCATAATGACGGTGGAGGAGGTTTCGAAGTCGGAAAATGCGGCGGTGGAGAAGAACGGTTGGGGAGCTAGAGTGGAAGGGCACGACGGCGGATTCGTCGCCGTTATAGAGATTTTCCGGCTGACGGAGGAATTAGTGGTGGTTGAGATCAAAAACAGAGTGAGGGAAATCGATCAAATTTGGAAAGAAAAATTAAGACCTCAACTCGATTGTTTGATCTACCAGTCGGAATAA | 1254 | 47.21 | MPEFDGGDPSPEGILFGKYELGKLLGRGAFAKVYHGRNVHTGKSVAIKAVNKLKVLNGGFTAHVKREIDIMRRLRHPNVVRLFEVLATKTKIYFVMEFAKGGELFTKVSKGRFSENLSRRYFQQLITAVGYCHSRGIFHRDLKPENLLLDENFDLRVSDFGLGALTDQIRPDGLLHTLCGTPAYVAPEILAKKGYDGAKIDVWSCGIILYVLTAGFLPFNDSNLMAMYRKIYRGDFRCPKWTSPDLRRFLSRLLDTNPETRITVDEIHQDPWFRKGFQEEKIQFEDYSVSELYGDMNNAKCLNAFDLISFSLCFDSTGLINETEFSSDVERFLSAESPEKIIMTVEEVSKSENAAVEKNGWGARVEGHDGGFVAVIEIFRLTEELVVVEIKNRVREIDQIWKEKLRPQLDCLIYQSE | 417 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 1180440 | 1181693 | - | Cp4.1LG19g01440.1 | Cpe19g00148 | 485556 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe19g00148 | 417 | ProSitePatterns | Protein kinases ATP-binding region signature. | 25 | 48 | IPR017441 | GO:0005524 | |
Cpe19g00148 | 417 | CDD | CIPK_C | 303 | 410 | - | - | |
Cpe19g00148 | 417 | PANTHER | CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 | 13 | 415 | - | - | |
Cpe19g00148 | 417 | Gene3D | Phosphorylase Kinase; domain 1 | 12 | 98 | - | - | |
Cpe19g00148 | 417 | Pfam | Protein kinase domain | 19 | 273 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe19g00148 | 417 | SMART | serkin_6 | 19 | 273 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe19g00148 | 417 | PANTHER | - | 13 | 415 | - | - | |
Cpe19g00148 | 417 | SUPERFAMILY | Protein kinase-like (PK-like) | 15 | 284 | IPR011009 | - | |
Cpe19g00148 | 417 | Pfam | NAF domain | 300 | 358 | IPR004041 | GO:0007165 | |
Cpe19g00148 | 417 | Gene3D | Kinase associated domain 1, KA1 | 298 | 415 | - | - | |
Cpe19g00148 | 417 | ProSiteProfiles | Protein kinase domain profile. | 19 | 273 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe19g00148 | 417 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 137 | 149 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe19g00148 | 417 | Gene3D | Transferase(Phosphotransferase) domain 1 | 99 | 279 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe10g00995 | Cpe19g00148 | CCT | |
Cpe10g00995 | Cpe19g00148 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe05g00998 | Cpe-Chr5:6530352 | Cpe19g00148 | Cpe-Chr19:1180440 | 0 | dispersed | |
Cpe16g00684 | Cpe-Chr16:7092122 | Cpe19g00148 | Cpe-Chr19:1180440 | 0 | dispersed | |
Cpe19g00148 | Cpe-Chr19:1180440 | Cpe19g01074 | Cpe-Chr19:7327724 | 1.10E-163 | dispersed | |
Cpe10g00995 | Cpe-Chr10:5660936 | Cpe19g00148 | Cpe-Chr19:1180440 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63018 | PF00069 | Pkinase | 8.50E-71 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe19g00148 | - | K12761 | csv:101208826 | 725.317 |