Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00155 ATGAGTGCTGGTCAGCCCCTGTTGGCTTCATCAGAATCTGCATCAGTTATTGAACACCGATCCCCATCTCCAAATTTTGGTTCTGCTGGTTCTCTATGTCGCAGTGCTTCCTTCACCTCTTCCACTCACGAGGATGCTCAGAGTGACGTCGTGGATGTGAAGGAAAACTGCGCCGCCTCTTTCGGAGATAAAGATTGGAGCGTTGAGGATTCCCTCAGACGTTCCACTTCTCTTTCTAGGAGGAGGCAGTATCATACTATTGGCTCTCTGTTTCCTAACCGGTCACCTTTTGGCGACCCCACGCAGGATAGAAGACGCCTGGTCTCGTGGGGTGCAATGGAGCTACATAGTATCAACGATAACCCTCCGAGCTTTGAACTCTCTAGAGTCCAGGAGAAATTGCATAAGGCACAAAGAAGTCATCATAAGAGTATGCAGTTCGAAGATAATTTACAGCATGACGATAATCCAAGGTTGATATACATCAATGATCCTAGGAGAACTAATGACAAGTATGAGTTCACAGGAAATGAGATAACAACTAGCAAGTACACATTGATTACCTTCTTGCCAAAGAATCTCTTCATTCAGTTCCACCGGGTTGCCTATCTTTATTTTCTTGCTATTGCAGCTCTCAACCAGCTTCCACCTTTGGCGGTCTTTGGGAGAACGGTATCTCTTTTTCCACTCCTGTTTGTGCTCTGTGTTACAGCTATTAAAGATGGCTATGAGGATTGGCGAAGACACCGATCGGATCGCAATGAGAATAATAAACAGGCTCTAGTGCTTCAATTGGATGAATTCCGATTGAAAGTGTGGAAAAAAATACGAGCGGGTGAAGTTGTAAAGATTTGTGCAGATGAGGTTATTCCTTGTGACATGGTTTTATTGGGGACAAGTGATCCTAGTGGCCTTGCTTACATCCAAACAATGAATTTGGATGGTGAGTCAAACTTGAAGACAAGGTATGCTAGGCAGGAAACTGCATCAGCAGTAGCTGAGGGATGCTCGTATTCAGGTCTTATTAGATGTGAACAACCTAATAGGAACATTTATGAGTTCACTGCCAATATGGAGTTCAACGGCCATAAATTTCCCCTCAGCCAGTCGAACATAGTCTTGCGTGGTTGTCAGCTGAAGAACACGGAATGGATTATTGGGGTGGTCGTCTATGCTGGACAAGAGACAAAAGCCATGTTAAACAGTGCCGTGTCTCCTGCCAAGCGAAGTAAACTGGAGGGTTACATGAACAGGGAAACGTTGTGGTTGTCAATCTTCCTCTTTATCATGTGTCTAGTTGTGGCCCTTGGAATGGGCTCATGGCTTGTTCGTCACAAGGAACAGCTTGATACCTTGCCATATTACAGGAAAACGTATTTCACAACTGGGGCAGAAAATGGCAAGAGGTACAGGTTTTATGGAATACCTATGGAAACCTTTTTCTCCTTTCTAAGTTCGATTATAGTTTTTCAGATCATGATACCGATATCCCTTTATATTACAATGGAGATGGTGAGACTGGGCCAGTCATATTTCATGATTGAAGATAAGCACATGTACTGTAGAATCTCTCGCTCAAGGTTTCAGTGCAGATCATTAAACATCAATGAAGATCTTGGTCAAGTTCGCTACATATTTTCCGATAAAACAGGAACCCTTACTGAAAATAAAATGGAATTCAAAAGAGCAAGTGTATATGGGAGGAATTATGGGAACAACTTGTCTGAGGAATATCCATCAATGTTGTATTCCGTTTCAGAAACTTTAGGGAGGAGGAAGTGGAAACTTAAATCTGACGTTGCTGTTGATACCGATCTTGTCAAATTATTGCACGAGGACCCAAACGGAGATGAAAAGATTGCTGCACATGATTTTTTTCTTACCTTGGCTGCATGCAATACTGTAATTCCTATTCTCATGGATGACGAATCTAGTTATGCGAATGGTGAATTGCACGAGGATTTTGAAACTATTGGTTATCAGGGGGAATCCCCTGATGAGCAAGCTCTAGTTGCTGCAGCCTCTGCTTATGGATATACCCTTTTCGAGCGCACATCCGGGCATATTGTTATCGATGTCAAGGGTGAGAACTTAAGGTTAGAAGTTCTGGGTTTACATGAGTTCGATAGCGTACGCAAAAGAATGTCTGTTGTCATCAAATTCCCCGATAACACTATAAAGGTGCTGGTAAAAGGCGCTGATACTTCAATGTTGAGTATTTTAGGCATCGACTCTGATAGGGAAGAGTTTATCAAGGATACTACTCAGAACCATTTGTGTGATTATTCAATGGAAGGGTTGCGAACACTTGTAGTTGCTGCTAAAGATCTGACAGATTCCGAATTTGAGCTGTGGCAGAGCAGATATGAGGATGCTAGTACTTCACTGACTGAACGAGTAGTAAAACTACGTCAGACAGCAGCCCTTATAGAATGTGACCTAAAGCTTTTGGGTGCAACTGCTATCGAGGACAAGCTTCAAGATGGTGTACCTGAAGCCATTGAATCGCTTCGGCAGGCGGGAATAAAGGTTTGGATTCTGACTGGAGATAAGCAGGAGACGGCCATATCAATCGGTCTCTCCTGCAAACTGCTTACTCCAGACATGCAGTCAATTATTATCAATGGAAATTCCGAGAACGATTGCAGGCAACTTTTAGGTGACGCCATAGCAAAATTTGGTATTAAATCAGGGCAGGGCGGAAGTCCTAGACAGAAGCTGAACAATTGTGAGAATGACTGTAACGGTACACTGAAGACGTCTAGTATGCCAGATTTTAATGAAGTGAAAGAAGAAGAAGAAGAAGTGACTGATAAACCACTAGCTCTAATAATAGATGGAAACAGTTTGGTCTACATTTTGGAGAAGGAATTGGAGTCAGAGGCAAGCATCTTGTTGTTACCTTCGAGAATCCTTTTTGACCTTGCAACTTCGTGCAATGTCGTGCTTTGCTGTCGTGTTGCACCCCTGCAGAAAGCTGGAATTGTCGATTTGATCAAGAGGGCAAATGACGTCTCAATGATTCAGATGGCCGATGTAGGCGTTGGTATATGCGGACAGGAAGGGCGTCAGGCGGTAATGGCATCTGATTTTGCCATGGGACAATTTCGCTTTTTAAAACGATTACTTCTAGTGCATGGACATTGGAACTATCAACGCGTAGGCTACATGGTTCTTTACAACTTTTACCGCAATGCTGTTTTCGTCCTGATGCTCTTCTGGTACATTCTATGCACAGCATTCTCAACGACTTCAGCTTTGACTGATTGGAGTAGCGTGTTTTACTCTGTTATTTATACGTCGATCCCGACTATTTTTGTTGGTATTCTGGACAAAGACTTGAGTGACAAAACTCTACTGCAATATCCTAAGCTCTATGGTGCTGGCCATAGACAGGAGGCATACAATTTGCGTCTCTTTTGGTTCACAATGATCGATACCCTGTGGCAGAGTCTCGTACTCTTCTACGTGCCGTTATACATCTACAGGGAGAGTTCCATTGATATATGGAGCTTGGGAAGTCTGTGGACCATAGCAGTTGTTATACTCGTGAATGTACACTTGGCGATGGATGTTCAACGTTGGGTGTATATTACACATGCTGCAGTTTGGGGATCCATAGTCATAACATATGCCTGCATGGTCGTGTTGGATTCGATACCTGTTTTCCCTAATTACTGGACGATTTTTCAACTGGCCAAGTCCCCGACATATTGGTTGACTATATTGCTCATAATAGTTGTAGGATTGCTTCCGCGTTATCTTTTTAAAGTCGTAAACCAAAGATTTTGGCCCTCGGATATTCAAATAGCCAGAGAAGCCGAGGTACTGGGAAAACGAAAAGGTAATGAACAATTGGGTTCCAAGCAAGATCGAAACTCCGATTAA 3888 43.08 MSAGQPLLASSESASVIEHRSPSPNFGSAGSLCRSASFTSSTHEDAQSDVVDVKENCAASFGDKDWSVEDSLRRSTSLSRRRQYHTIGSLFPNRSPFGDPTQDRRRLVSWGAMELHSINDNPPSFELSRVQEKLHKAQRSHHKSMQFEDNLQHDDNPRLIYINDPRRTNDKYEFTGNEITTSKYTLITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNKQALVLQLDEFRLKVWKKIRAGEVVKICADEVIPCDMVLLGTSDPSGLAYIQTMNLDGESNLKTRYARQETASAVAEGCSYSGLIRCEQPNRNIYEFTANMEFNGHKFPLSQSNIVLRGCQLKNTEWIIGVVVYAGQETKAMLNSAVSPAKRSKLEGYMNRETLWLSIFLFIMCLVVALGMGSWLVRHKEQLDTLPYYRKTYFTTGAENGKRYRFYGIPMETFFSFLSSIIVFQIMIPISLYITMEMVRLGQSYFMIEDKHMYCRISRSRFQCRSLNINEDLGQVRYIFSDKTGTLTENKMEFKRASVYGRNYGNNLSEEYPSMLYSVSETLGRRKWKLKSDVAVDTDLVKLLHEDPNGDEKIAAHDFFLTLAACNTVIPILMDDESSYANGELHEDFETIGYQGESPDEQALVAAASAYGYTLFERTSGHIVIDVKGENLRLEVLGLHEFDSVRKRMSVVIKFPDNTIKVLVKGADTSMLSILGIDSDREEFIKDTTQNHLCDYSMEGLRTLVVAAKDLTDSEFELWQSRYEDASTSLTERVVKLRQTAALIECDLKLLGATAIEDKLQDGVPEAIESLRQAGIKVWILTGDKQETAISIGLSCKLLTPDMQSIIINGNSENDCRQLLGDAIAKFGIKSGQGGSPRQKLNNCENDCNGTLKTSSMPDFNEVKEEEEEVTDKPLALIIDGNSLVYILEKELESEASILLLPSRILFDLATSCNVVLCCRVAPLQKAGIVDLIKRANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRVGYMVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIFVGILDKDLSDKTLLQYPKLYGAGHRQEAYNLRLFWFTMIDTLWQSLVLFYVPLYIYRESSIDIWSLGSLWTIAVVILVNVHLAMDVQRWVYITHAAVWGSIVITYACMVVLDSIPVFPNYWTIFQLAKSPTYWLTILLIIVVGLLPRYLFKVVNQRFWPSDIQIAREAEVLGKRKGNEQLGSKQDRNSD 1295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1247702 1254175 - Cp4.1LG19g01600.1 Cpe19g00155 485563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00155 1295 SUPERFAMILY HAD-like 533 1043 IPR036412 -
Cpe19g00155 1295 Pfam Phospholipid-translocating ATPase N-terminal 160 225 IPR032631 -
Cpe19g00155 1295 Gene3D - 543 555 IPR023214 -
Cpe19g00155 1295 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 151 1293 - -
Cpe19g00155 1295 SUPERFAMILY Calcium ATPase, transmembrane domain M 174 1265 IPR023298 -
Cpe19g00155 1295 Pfam Phospholipid-translocating P-type ATPase C-terminal 1026 1266 IPR032630 -
Cpe19g00155 1295 Gene3D - 660 797 IPR023299 GO:0000166
Cpe19g00155 1295 SUPERFAMILY Calcium ATPase, transduction domain A 257 398 IPR008250 -
Cpe19g00155 1295 ProSitePatterns E1-E2 ATPases phosphorylation site. 548 554 IPR018303 -
Cpe19g00155 1295 Gene3D - 233 402 - -
Cpe19g00155 1295 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 980 1084 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe19g00155 1295 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 479 569 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe19g00155 1295 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 174 1273 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cpe19g00155 1295 Gene3D - 814 1038 IPR023214 -
Cpe19g00155 1295 Pfam E1-E2 ATPase 273 504 - -
Cpe19g00155 1295 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 552 830 IPR023299 GO:0000166
Cpe19g00155 1295 Gene3D - 522 542 - -
Cpe19g00155 1295 Pfam haloacid dehalogenase-like hydrolase 543 858 - -
Cpe19g00155 1295 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 151 1293 - -
Cpe19g00155 1295 Gene3D - 556 572 IPR023299 GO:0000166
Cpe19g00155 1295 MobiDBLite consensus disorder prediction 1 34 - -
Cpe19g00155 1295 CDD P-type_ATPase_APLT_Dnf-like 176 1158 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g01002 Cpe19g00155 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe13g00729 Cpe-Chr13:6703696 Cpe19g00155 Cpe-Chr19:1247702 0 dispersed
Cpe19g00155 Cpe-Chr19:1247702 Cpe20g00099 Cpe-Chr20:522155 0 dispersed
Cpe10g01002 Cpe-Chr10:5751796 Cpe19g00155 Cpe-Chr19:1247702 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00155 K14802 - csv:101206692 2284.22