Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00157 ATGAAGGAAATCCATCACGTACGTCTTGCATTTGCATCTATCTGTGTTTTCGTTTTCTTGTTCTTCAATGTTCATGTGACTTCAGCACAAAACTACATCCCTCGGGATTTCATCCTCCTCAGTTGTGGAGGACCTTCCACTGCCGACGACATGGATGGCCGGAAATGGATGACCGATGACAAATCCAAGTTTCTTCCCGCGACAGGGAATAGCACTACATCGAGAGCCGCTACTCAGGTTCCTTCAGTTCTTGAAACTCCTTTCATGACGGCTAGGGTTTTTCACTCTAATTTCACCTATACCTTTCCTGTGGCTCCTACTCGTTTATTCCTTCGTCTGTACTTTTATCCTTCTTCCTATGGCGGCCTTGATGCATCTGATGCTCGATTCTCTGTTTCCGCTCAAACCTATACTCTCCTTAATAACTTCAGCGCTTCACAAACCGCTGAGGCTTTGAATTCTGCGACTATCGTTAAGGAATACTCGATCAATGTTGAAAATGGAAGGTTGAGCTTGACTTTCACTCCATCCCCCACTCATCCAAAGGCTTATGCGTTTGTTAACGGGATTGAGATTGTATCTATGCCTGATATTTACAGTGAAACTTCCGGGACTGTTTTGATTGTTGGCCAATCTAGTCCTTTCACTGTGGATAACACCACTGCGCTCGAGAACATCCATCGGTTGAATGTCGGGGGGAATTATATTTCGCCTTCTGCTGATACAGGGATGCAGAGGCCTTGGTTTGATGATTCTCCATATTTGTTTGCTGCAGCAAAGGGAGTGACAACGATTACGGATCAGAACACAAGGATTACTTATCCTCCCAGTATTTCTACTTATGTTGCGCCGCTTGACGTTGCTTACAAAGGGAAGATGGATCCTGATGCTTCCCCTGGCATGGATGGAAACATAACCGACTCGAGAAGCACCGGAATCAGTATGAGCATCGGAGGCCGAAGCCTCGCCAGTGAAGATTCCTACGGGTTGACACCGAGTACCGTCTTCTCACAGATCTTGAACCCAAAAGGTCGTTAA 1038 46.05 MKEIHHVRLAFASICVFVFLFFNVHVTSAQNYIPRDFILLSCGGPSTADDMDGRKWMTDDKSKFLPATGNSTTSRAATQVPSVLETPFMTARVFHSNFTYTFPVAPTRLFLRLYFYPSSYGGLDASDARFSVSAQTYTLLNNFSASQTAEALNSATIVKEYSINVENGRLSLTFTPSPTHPKAYAFVNGIEIVSMPDIYSETSGTVLIVGQSSPFTVDNTTALENIHRLNVGGNYISPSADTGMQRPWFDDSPYLFAAAKGVTTITDQNTRITYPPSISTYVAPLDVAYKGKMDPDASPGMDGNITDSRSTGISMSIGGRSLASEDSYGLTPSTVFSQILNPKGR 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1276782 1279484 + Cp4.1LG19g01570.1 Cpe19g00157 485565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00157 345 Pfam Malectin domain 40 175 IPR021720 -
Cpe19g00157 345 PANTHER OS03G0124300 PROTEIN-RELATED 16 305 - -
Cpe19g00157 345 Gene3D - 37 196 - -
Cpe19g00157 345 PANTHER OSJNBA0013K16.18 PROTEIN 16 305 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe13g00978 Cpe-Chr13:8106211 Cpe19g00157 Cpe-Chr19:1276782 6.55E-43 dispersed
Cpe19g00157 Cpe-Chr19:1276782 Cpe02g00720 Cpe-Chr2:4569646 5.96E-29 dispersed
Cpe10g01006 Cpe-Chr10:5778642 Cpe19g00157 Cpe-Chr19:1276782 1.17E-27 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00157 - - cpep:111781600 521.546