Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00178 ATGGCTGGTCAATCAGATCCTCACCTGACCCTATTTTCTGCAGAAGAGATCGAGTTTGTAGCTGAAGATGAAATGGTGGAGATTGTTCCCAATATGAGAATGGATTCTCTAAATTTGATTTGTGGGGATTATGGTCCATTCTATCCCCAAATCGCCACTGAAGTTCCATTGTGGCTAGCGATTGCTCTGAAAAAAAGAGGGAAATGTGCAATTAGGCCTCCAGAGTGGATGTCTGTTGAAAAGTTGACACAAACGTTGGAGGCAGAACGAGAGTCTCAAGGATCTTTCCAGATACTACCCTTCCATTACGTCGAAATATCGAAACTTCTTTTTGACCACGCACGAGACGACGTTCCTGACATGTATTTGGTAAGGTCTCTTATTGAAGATATCAGGGATGTTCGGTTTCACAAAGTTGAAACCAGTTTGGAGTCGATTGATACACGCACATCCGCAGTGAAGATTAAAGATCTATCTGCCATGGAAGTGAATATAGTTCGACCGTTTGTCGGTAGAGCGTTGCAGGCAATTTACAAGCACGGAAATCCAGAGTTGGTCCCAGATCAAGAAAGAATGACCAATGTGCAGTCACAAGGACATGATCATGGGCAAAGGAGACCTCTTCGGAGACGGTAG 636 44.03 MAGQSDPHLTLFSAEEIEFVAEDEMVEIVPNMRMDSLNLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRPPEWMSVEKLTQTLEAERESQGSFQILPFHYVEISKLLFDHARDDVPDMYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVGRALQAIYKHGNPELVPDQERMTNVQSQGHDHGQRRPLRRR 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1436190 1440767 - Cp4.1LG19g01820.1 Cpe19g00178 485586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00178 211 CDD GINS_A_psf2 66 182 - -
Cpe19g00178 211 Pfam GINS complex protein 53 162 IPR021151 -
Cpe19g00178 211 SUPERFAMILY PriA/YqbF domain 12 71 - -
Cpe19g00178 211 Gene3D - 12 77 - -
Cpe19g00178 211 PIRSF GINS_PSF2 2 211 IPR007257 GO:0005634|GO:0006260
Cpe19g00178 211 Gene3D - 78 192 - -
Cpe19g00178 211 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 1 197 IPR007257 GO:0005634|GO:0006260
Cpe19g00178 211 SUPERFAMILY GINS helical bundle-like 73 182 IPR036224 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00178 K10733 - csv:101212053 399.823