Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00180 ATGGGGAGTTCTGGATTCTCGTGGAAGTTGCCGGATCATCCTAAGCTTCCTAAGGATAAGACGGTAGCTCTTATTGTTTTGGATGGGTGGGGTGAAGCTGATCCTGATCGCTATAACTGTATCCATGTTGCCGAAACTCCCACCATGGATTCCCTTAAGAAGGGCGCCCCTGAGAGATGGAGGCTGATCAGGGCACATGGAAAGGCAGTAGGACTTCCTACAGAAGATGACATGGGCAACAGCGAGGTCGGACATAACGCGCTTGGTGCTGGACGTATCTATGCTCAAGGTGCAAAGCTTGTTGACCTTGCTCTTGCCTCTGGAAAAATATATGAAGGAGAAGGTTTCAAATACATCAAGCAATCCTTTGAAACCGGCACATTGCATCTTATAGGATTATTGAGTGATGGTGGAGTGCACTCTAGGATAGATCAGTTACAGTTATTACTCAAAGGAGCAAGTGAGAATGGGGCTAAAAGAATCCGTGTCCATATACTTACTGATGGGCGTGATGTTTTGGATGGTTCGAGTGTGGGATTTGTAGAAACTCTTGAAAATGACCTTGCCAAACTACGTGAGAGCGGGGTCGATGCACAAATCGCATCTGGTGGAGGCCGTATGTATGTGACAATGGATCGATATGAGAATGATTGGGAAGTTGTGAAGCGAGGATGGGACGCACAAGTACTTGGCGAAGCACCATACAAGTTCAAAAGTGCCGTTGAAGCTGTGAAGAAATTGAGAGAGGAAACCAAAGCAAGTGATCAATATCTTCCTCCATTTGTCATAGTTGATGATAGCGGGAAGTCTGTGGGCCCAATAGTGGATGGAGATGCAGTAGTCACCTTTAATTTTAGAGCAGATCGGATGGTTATGATCGCCAAGGCCCTCGAATATGAAGATTTTGATAAATTTGACCGAGTTAGGGTCCCTAAAATTCGTTATGCTGGAATGCTTCAGTATGATGGTGAGTTGAAGCTTCCAAGCCATTACCTTGTCTCCCCCCCAGAGATTGAGAGAACATCTGGGGAATATCTTGTGCACAATGGTGTTCGGACCTTGGCTTGCAGTGAGACCGTCAAGTTTGGCCATGTTACATTCTTCTGGAATGGAAACCGTTCTGGATATTTTAACCCAGAAATGGAGGAATATGTGGAGATTCCTAGTGATTCTGGGATCACCTTTAATGTTAAGCCAAAGATGAAGGCCATAGAGATTGCTGAGAAGGCACGAGATGCTATTCTTAGCCGAAAATTCCATCAGGTACGTGTTAACCTGCCGAACGGTGACATGGTCGGACACACTGGTGATATTGAGGCCACAGTTGTAGCTTGCAAGGCTGCTGATGATGCCGTAAAAATTATCCTCGACGCAATCGAACAAGTAGGGGGAATATACGTTGTTACTGCAGATCACGGAAATGCGGAGGATATGGTGAAGAGAAACAAGTCAGGGCAGCCTCTTCTTGACAAAAATGGCAAAATTCAAATCCTGACCTCTCACACTCTTCAGCCAGTTCCTATTGCAATTGGAGGTCCGGGACTGGCCCCTGGAGTCCGATTCCGTAAGGATGTTCCTGATGGAGGGCTTGCCAATGTTGCTGCAACTGTTATCAATCTCCATGGGATTAACCGTGCAAGAAAACTAGCAATGGCTATGCTAGATTCTGCGGCGGTGACCGGCGGCCTGGTGAAGCAGCGTGAGCAACGCGCGGAGGAAGGCTCTTCCGGCGAGCAACGGCGTCCCGCGTCAATGTGGCTCGTCCGGCAGCGGTCTGACCGGCCGAGCGTGAAGGAGAGGCAGCATTGGCGTGGGACGAGAGGTGGACGGCGGCGTGCGGTGGTCGGAGGAGAGGAAAGACAAACGCAGGAGATAGGGAGAAGAAAGGAGGGTGGTGCGGCTCGAGTGACTGGACGGGGCGGCGGCTGGTCTAGGGCTCCGTGTCTCAACTATGTCGGAGTAATAATGATCAACTGTGCAACTACCATAACACGAGCTACCATTTTCCGAAACCTCACTTCTCTGACAACCGTGTTGGAGGATGGTGATCAACTGTGTGACTACCCTCAACACAAGATATTAATGTTCGAAACTCCTATTCTCAGACAATTGTGTTGGAGTGAAAATCAGTTCATCATTTTCAATCCATTTCCACAGCAGGAAGAAGAAGAAGAAGAAGAAGAAGAATCAGAATCGGAATCTTCAGCTGCCATGGAGAAGTACGAGAAGCTCGAAAAGGTCGGAGAAGGAACTTACGGGAAGGTGTACAAGGCCAAAGATAAGGAAACTGGCCAACTTGTTGCTCTGAAGAAAACTCGCCTTGAAATGGACGAAGAAGGAGTTCCACCGACGGCGCTTCGTGAGGTTTCTCTTCTCCAATTGCTCTCTCAGTCTCTCTATGTTGTTCGTCTTCTCTGCGTTGAGCATGTTCACCACCATAAAAGTGGTAAGCCTCTTCTCTACCTTGTATTTGAGTATCTGGATACTGATCTCAAGAAGTACATCGATTCGCATCGCAAGGGACCCAACCCTAGGCCTCTTCCTTCTTCCCTTGTTCAGAGTTTCTTGTTTCAACTCTGTAAGGGTGTTGCGCATTGTCATAGTCATGGCGTTCTCCATCGTGACCTGAAACCGCAGAATCTTCTTCTGGATCAGGGTAAGGGTATTCTGAAGATTGCCGATCTTGGCCTTGGCCGTGCTTTTACTGTCCCTCTTAAGAGCTACACTCATGAGATTGTTACTCTCTGGTACCGTGCTCCTGAGGTTCTCCTTGGATCCACTCATTACTCCACTGCTGTCGATATGTGGTCTGTTGGTTGCATCTTCGCTGAAATGGTGAGAAGGCAGGCCCTGTTCCCCGGAGATTCTGAGTTTCAGCAGTTGCTCCACATTTTTAGGCTTCTAGGTACCCCCACCGAGAAACAGTGGCCTGGAGTTAGTTCTTTGCGGGACTGGCATGTCTACCCTCAATGGGAACCGCAGAATCTGACCCGTGCAGTTCCATCCCTGGAACCCGAGGGTGCTGACCTTCTCTCGGTTCCTATTGCAATTGGAGGTCCGGGACTGGCCCCTGGAGTCCGATTCCGTAAGGATGTTCCTGATGGAGGGCTTGCCAATGTTGCTGCAACTGTTATCAATCTCCATGGGATTAACCGTGCAAGAAAACTAGCAATGGCTATGCTAGATTCTGCGGCGGTGACCGGCGGCCTGGTGAAGCAGCGTGAGCAACGCGCGGAGGAAGGCTCTTCCGGCGAGCAACGGCGTCCCGCGTCAATGTGGCTCGTCCGGCAGCGGTCTGACCGGCCGAGCGTGAAGGAGAGGCAGCATTGGCGTGGGACGAGAGGTGGACGGCGGCGTGCGGTGGTCGGAGGAGAGGAAAGACAAACGCAGGAGATAGGGAGAAGAAAGGAGGGTGGTGCGGCTCGAGTGACTGGACGGGGCGGCGGCTGGTCTAGGGCTCCGTGTCTAGGGTATAACTCTATACTTAACCAACCGACATTCATCGACAAGCTCTACCCAAACGACACCACCTTGAAGAACGCTACTAAAATATAA 3555 49.85 MGSSGFSWKLPDHPKLPKDKTVALIVLDGWGEADPDRYNCIHVAETPTMDSLKKGAPERWRLIRAHGKAVGLPTEDDMGNSEVGHNALGAGRIYAQGAKLVDLALASGKIYEGEGFKYIKQSFETGTLHLIGLLSDGGVHSRIDQLQLLLKGASENGAKRIRVHILTDGRDVLDGSSVGFVETLENDLAKLRESGVDAQIASGGGRMYVTMDRYENDWEVVKRGWDAQVLGEAPYKFKSAVEAVKKLREETKASDQYLPPFVIVDDSGKSVGPIVDGDAVVTFNFRADRMVMIAKALEYEDFDKFDRVRVPKIRYAGMLQYDGELKLPSHYLVSPPEIERTSGEYLVHNGVRTLACSETVKFGHVTFFWNGNRSGYFNPEMEEYVEIPSDSGITFNVKPKMKAIEIAEKARDAILSRKFHQVRVNLPNGDMVGHTGDIEATVVACKAADDAVKIILDAIEQVGGIYVVTADHGNAEDMVKRNKSGQPLLDKNGKIQILTSHTLQPVPIAIGGPGLAPGVRFRKDVPDGGLANVAATVINLHGINRARKLAMAMLDSAAVTGGLVKQREQRAEEGSSGEQRRPASMWLVRQRSDRPSVKERQHWRGTRGGRRRAVVGGEERQTQEIGRRKEGGAARVTGRGGGWSRAPCLNYVGVIMINCATTITRATIFRNLTSLTTVLEDGDQLCDYPQHKILMFETPILRQLCWSENQFIIFNPFPQQEEEEEEEEESESESSAAMEKYEKLEKVGEGTYGKVYKAKDKETGQLVALKKTRLEMDEEGVPPTALREVSLLQLLSQSLYVVRLLCVEHVHHHKSGKPLLYLVFEYLDTDLKKYIDSHRKGPNPRPLPSSLVQSFLFQLCKGVAHCHSHGVLHRDLKPQNLLLDQGKGILKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRLLGTPTEKQWPGVSSLRDWHVYPQWEPQNLTRAVPSLEPEGADLLSVPIAIGGPGLAPGVRFRKDVPDGGLANVAATVINLHGINRARKLAMAMLDSAAVTGGLVKQREQRAEEGSSGEQRRPASMWLVRQRSDRPSVKERQHWRGTRGGRRRAVVGGEERQTQEIGRRKEGGAARVTGRGGGWSRAPCLGYNSILNQPTFIDKLYPNDTTLKNATKI 1184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1450012 1464053 - Cp4.1LG19g01860.1 Cpe19g00180 485588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00180 1184 Coils Coil 720 747 - -
Cpe19g00180 1184 Pfam Metalloenzyme superfamily 20 544 IPR006124 GO:0003824|GO:0046872
Cpe19g00180 1184 PANTHER 2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE 2-RELATED 1 548 - -
Cpe19g00180 1184 PANTHER 2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE 2-RELATED 1012 1055 - -
Cpe19g00180 1184 Gene3D Transferase(Phosphotransferase) domain 1 829 1013 - -
Cpe19g00180 1184 ProSiteProfiles Protein kinase domain profile. 741 1111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe19g00180 1184 ProSitePatterns Serine/Threonine protein kinases active-site signature. 871 883 IPR008271 GO:0004672|GO:0006468
Cpe19g00180 1184 MobiDBLite consensus disorder prediction 1072 1147 - -
Cpe19g00180 1184 Pfam Protein kinase domain 741 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe19g00180 1184 MobiDBLite consensus disorder prediction 719 739 - -
Cpe19g00180 1184 Pfam BPG-independent PGAM N-terminus (iPGM_N) 102 322 IPR011258 GO:0004619|GO:0005737|GO:0006007|GO:0030145
Cpe19g00180 1184 CDD iPGM 20 543 IPR005995 GO:0004619|GO:0006007
Cpe19g00180 1184 SUPERFAMILY 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain 96 331 IPR036646 GO:0004619|GO:0005737
Cpe19g00180 1184 PANTHER 2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE 1 548 IPR005995 GO:0004619|GO:0006007
Cpe19g00180 1184 MobiDBLite consensus disorder prediction 1118 1141 - -
Cpe19g00180 1184 Gene3D Phosphorylase Kinase; domain 1 724 828 - -
Cpe19g00180 1184 ProSitePatterns Protein kinases ATP-binding region signature. 747 770 IPR017441 GO:0005524
Cpe19g00180 1184 PANTHER 2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE 1012 1055 IPR005995 GO:0004619|GO:0006007
Cpe19g00180 1184 SUPERFAMILY Alkaline phosphatase-like 20 544 IPR017850 -
Cpe19g00180 1184 SUPERFAMILY Protein kinase-like (PK-like) 737 1012 IPR011009 -
Cpe19g00180 1184 SMART serkin_6 741 1109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe19g00180 1184 MobiDBLite consensus disorder prediction 565 639 - -
Cpe19g00180 1184 Gene3D Alkaline Phosphatase, subunit A 22 545 IPR017850 -
Cpe19g00180 1184 MobiDBLite consensus disorder prediction 611 634 - -
Cpe19g00180 1184 TIGRFAM pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 21 549 IPR005995 GO:0004619|GO:0006007
Cpe19g00180 1184 Gene3D - 96 340 IPR036646 GO:0004619|GO:0005737
Cpe19g00180 1184 MobiDBLite consensus disorder prediction 719 733 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01276 Cpe-Chr1:7675157 Cpe19g00180 Cpe-Chr19:1450012 7.72E-101 dispersed
Cpe09g00381 Cpe-Chr9:2301648 Cpe19g00180 Cpe-Chr19:1450012 2.18E-08 dispersed
Cpe19g00180 Cpe-Chr19:1450012 Cpe09g00576 Cpe-Chr9:3977814 1.70E-65 dispersed
Cpe02g00013 Cpe-Chr2:91371 Cpe19g00180 Cpe-Chr19:1450012 3.60E-115 transposed
Cpe10g01025 Cpe-Chr10:5928740 Cpe19g00180 Cpe-Chr19:1450012 1.63E-13 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63022 PF01676 Metalloenzyme 7.90E-111 CL0088 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00180 K15633 - csv:101217925 1013.06