Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00231 ATGGACTTATTACAGTCTTTGGATCCTCAAATCCTTCTGGGTTCGGCTGTGGCTGTTTTAGCTCTTGCCTTTGGTGCTCTCTATTTGTTATCCTCGTCCAAGAAATCCAAATCCGGAGGTTGCTTGGATCCAGAGAATTTCAAGGAGTTTAAGCTTATCAAGCGTGCGCAGCTGAGCCATAATGTGGCGAAGTTTACATTTACACTCCCAAGTTCTACTTCAGTTTTGGGCCTTCCCATTGGACAACATATAAGTTGCAGGGGCAAGGATGGCCAAGGTGAAGATGTTATCAAACCTTATACACCTATTACTTTGGATTCTGATGTCGGATATTTTGAATTAGTCATAAAGATGTATCCCCAAGGAAGGATGTCACACCATTTCCGACAGATGCGTGTCGGTGATTTTCTGTCTGTGAAAGGGCCCAAGGGGCGATTCAGGTATCAACCAGGCGAGGTCAGAGCATTTGGAATGCTCGCTGGAGGCTCTGGCATTACTCCTATGTATCAAGTTGCTCGAGCCATATTAGAAAATCCAAATGACAAGACGAAGGTACATCTCATTTATGCCAACGTCACCTACGAGGACATTCTTTTGAAGGAGGAGTTAGATCTTCTTGCCTCAAGGTACCCAGATAGCTTCAAGCTCTATTATGTTTTAAACCAGCCTCCTGAATCGTGGGATGGTGGCGTTGGATTCGTGACGAAGGAGATGATTCAAACCCATTGCCCTGCTCCTGCTTCTGATGTTCGGATTTTAAGATGTGGGCCACCACCAATGAACAAGGCCATGGCTGCTCATCTTGAAGCTCTTGGATACGCACCAGAGATGGTGTTCATGTTCTGA 846 45.51 MDLLQSLDPQILLGSAVAVLALAFGALYLLSSSKKSKSGGCLDPENFKEFKLIKRAQLSHNVAKFTFTLPSSTSVLGLPIGQHISCRGKDGQGEDVIKPYTPITLDSDVGYFELVIKMYPQGRMSHHFRQMRVGDFLSVKGPKGRFRYQPGEVRAFGMLAGGSGITPMYQVARAILENPNDKTKVHLIYANVTYEDILLKEELDLLASRYPDSFKLYYVLNQPPESWDGGVGFVTKEMIQTHCPAPASDVRILRCGPPPMNKAMAAHLEALGYAPEMVFMF 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1918564 1922731 + Cp4.1LG19g02370.1 Cpe19g00231 485639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00231 281 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 137 280 IPR039261 -
Cpe19g00231 281 Pfam Oxidoreductase FAD-binding domain 50 148 IPR008333 -
Cpe19g00231 281 PRINTS Cytochrome B5 reductase signature 76 87 - -
Cpe19g00231 281 PRINTS Cytochrome B5 reductase signature 98 105 - -
Cpe19g00231 281 PRINTS Cytochrome B5 reductase signature 134 148 - -
Cpe19g00231 281 PRINTS Cytochrome B5 reductase signature 157 176 - -
Cpe19g00231 281 PRINTS Cytochrome B5 reductase signature 195 206 - -
Cpe19g00231 281 PRINTS Cytochrome B5 reductase signature 251 259 - -
Cpe19g00231 281 CDD cyt_b5_reduct_like 50 281 - -
Cpe19g00231 281 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 45 149 IPR017927 GO:0016491
Cpe19g00231 281 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 281 IPR001834 GO:0016491
Cpe19g00231 281 Gene3D Translation factors 40 139 - -
Cpe19g00231 281 Pfam Oxidoreductase NAD-binding domain 158 264 IPR001433 GO:0016491
Cpe19g00231 281 SUPERFAMILY Riboflavin synthase domain-like 42 150 IPR017938 -
Cpe19g00231 281 Gene3D - 140 281 IPR039261 -
Cpe19g00231 281 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 281 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g01081 Cpe-Chr11:9023596 Cpe19g00231 Cpe-Chr19:1918564 5.24E-68 dispersed
Cpe08g01365 Cpe-Chr8:9811681 Cpe19g00231 Cpe-Chr19:1918564 1.35E-172 transposed
Cpe16g00938 Cpe-Chr16:8657691 Cpe19g00231 Cpe-Chr19:1918564 9.68E-132 transposed
Cpe10g01086 Cpe-Chr10:6608643 Cpe19g00231 Cpe-Chr19:1918564 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00231 K00326 - csv:101212569 501.516