Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00242 ATGGCCCTTGACCCACTTCCCCACCATTCTTCCCGATGGGGAAAAACGACGGAGAACACCCACCGCCCTCCGCCGTCGGTTCCGCTCCGTCCCAAGGCCGATGCTGTTCTGGGTGTGTTTCAATTCGAAGGCTCATTGGCTTCAGATGCGTCTTCATTCTGCTTTTGTCCGTCGCCTTGTTCGTTTCTGCTGTTTTTTGGCTGCCCCCTTTTCTCCATTATTCAGATCAAAAGGATCTGGGTCTTAATTCCTCGTATCGAGTGGATCATCCGTTTTACGAACCGAAGTTTCGAGTTGCTTGTGATTTTTCACTTCTCTGTGGATAGATGGTTAGGTGATATAGTAGCAACGTTCGTTGTTGAGAGACCAGTTTCTTTGCTGCAAGACAATATCGAGCGACTCCGGACCGACATTTTTGAAGAGTTCCCTATACCTTCTATCAAAGTGGATATACTATCTTTAAACTCGTTATCAGGATCAAACCGTACAAAAGTTGTATTCGGCATTGATCCAGATACGGATGATCCCGAAATCCCGTCAACTTATCTGAGTTTAATCAGGTCGACCTGTGCAAGTCTAGTAACAAATCAGTCGTTCCTCCGCATTACTAAATCCATGTTTGGTGAGGCGTTTTCGTTTGAAGTACTGAAATTCCCCGGAGGAATAACGATAATCCCGCCTCAGAGTGCATTTCTTTTGCAGAAAGTGCAAATTCTTTTCAACTTTACATTGAACTTCTCTATTCATCAGATTCAAGTACATTTCAGTGAACTGACAAGCCAACTGGATGCGGGATTACGACTAGCTCCCTACGAGATTTTGTATATTAAACTGTGGAATGCGGAAGGGTCGACTGTGACTGCCCCGACGATTGTCCAGTCATCTGTTCTTCTAGAAGTTGGAAATACGCCATCGATGCAACGGTTGAAACAGCTAGCTCAGACCATCTCTGTTTCTAATTCTAGCAACCTCGGCCTGAATAATACCGAGTTTGGAAAAGTGAAGCAAGTTCGACTTTCCTCGATTCTTAAACACTCGCTCAATGGTATGGATGGGAAAGGCCCCATAAGGTCACCTTCTTCAGCTCCTACACCACAGCCCCATAACTTCCATCATCCACCATCTCACCACCATCACCACCATCATGCTCCTCTAACGCCTGTAATTTCACCTGCCCCTGCGCCTGAGACCGGTGCACCGGAATATGGGTTGCCTGCCCCTAAAAGTGCAGCATCGCCTAAGCGAAGTTACGAGGCAAAGCCTCCTGGTTGTCAATATAAGAGGAAATCTGGTAGGAAAGAGGGAAAGCAACCTCATTTGTCCCCGCTTGCGTCGCCCAGCATATCTCCTGTTCATTCTGCTGCATCGCCATCACAACAACATCACGTCTCTCCAACTCAGGCATCGACTCCATTGCCGAGTGTCATTTACGCTCATGTTCAACCACCATCGAAAAGTGACTCCAACCACCCCGAAAAGTCCACGACGAGTCCATCCATTGTGCCATCTCCATCTCCATCTCCATCTAGCGCACATCATTGGTGTATGATTACTCGGTGGGGGTTCACACTGTCTCTAATTGTCGCATTCTACATGTAA 1599 47.09 MALDPLPHHSSRWGKTTENTHRPPPSVPLRPKADAVLGVFQFEGSLASDASSFCFCPSPCSFLLFFGCPLFSIIQIKRIWVLIPRIEWIIRFTNRSFELLVIFHFSVDRWLGDIVATFVVERPVSLLQDNIERLRTDIFEEFPIPSIKVDILSLNSLSGSNRTKVVFGIDPDTDDPEIPSTYLSLIRSTCASLVTNQSFLRITKSMFGEAFSFEVLKFPGGITIIPPQSAFLLQKVQILFNFTLNFSIHQIQVHFSELTSQLDAGLRLAPYEILYIKLWNAEGSTVTAPTIVQSSVLLEVGNTPSMQRLKQLAQTISVSNSSNLGLNNTEFGKVKQVRLSSILKHSLNGMDGKGPIRSPSSAPTPQPHNFHHPPSHHHHHHHAPLTPVISPAPAPETGAPEYGLPAPKSAASPKRSYEAKPPGCQYKRKSGRKEGKQPHLSPLASPSISPVHSAASPSQQHHVSPTQASTPLPSVIYAHVQPPSKSDSNHPEKSTTSPSIVPSPSPSPSSAHHWCMITRWGFTLSLIVAFYM 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1985781 1989770 + Cp4.1LG19g02350.1 Cpe19g00242 485650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00242 532 MobiDBLite consensus disorder prediction 442 474 - -
Cpe19g00242 532 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 112 528 - -
Cpe19g00242 532 PANTHER F20B24.21 112 528 - -
Cpe19g00242 532 MobiDBLite consensus disorder prediction 1 28 - -
Cpe19g00242 532 MobiDBLite consensus disorder prediction 481 505 - -
Cpe19g00242 532 MobiDBLite consensus disorder prediction 346 505 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g01098 Cpe19g00242 CCT
Cpe03g00446 Cpe19g00242 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00446 Cpe-Chr3:2524679 Cpe19g00242 Cpe-Chr19:1985781 9.87E-101 dispersed
Cpe19g00242 Cpe-Chr19:1985781 Cpe14g00309 Cpe-Chr14:1819251 2.65E-44 dispersed
Cpe10g01098 Cpe-Chr10:6722216 Cpe19g00242 Cpe-Chr19:1985781 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00242 - - bhj:120073837 628.632