Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00245 ATGGCTTCAAGACCAGTAGTTCCCCAACAAATCAGAGGCGAGGCAGAGATCGGCAGAGGGAAGCAGGGGAAGGGCGGTGCAGCGGCGGATGCCAGGAGCCGTCGAGCATTGGGTGATATTGGGAATCTGGTAACTGTTCGAGGAATTGACGCAAAGGTTAATCGCCCTATTACAAGGAGTTTCTGCGCTCAGATGCTTGCTAATGCCCAAGCGGCTGCAAAAGCTGAAAATAATAAGAAACAAGTGCCTGTTAGTGTAGATGGGGTTGCTCCCATTCTTGATGGTGGGGTTGTGGCTGTTAAGAAACCAGGAGCTCCCAAGGCTGCAACGAAGAAAGTTGTTTCCAAACCAAAAGCGGCGGTGATCGAGATAAGCCCGGATACGGTCGAAAAAGATCGGGGCAAGGAAGTGAAATGTGCTAACAAGAAAAAGGAAGAAGGGGTCTCAAAGAAGAAGGCACAGACTCTCACCGCAGTCATGACGGCTAGAAGCAAGGCTGCTTGTGGTGTAACCAAGAAACCAAAGGAACAGATAATTGACATTGACGCAGCAGATGTTGGAAATGAGTTGGCAGAAGTGGAATATGTTGAGGACATTTATAAGTTCTATAAGGAAGTTGAGAATGAGAGTAGGCCTCATGACTATATGGATTCACAACCGGAGATAAACACTTCAATGAGAGCAATATTGGTGGATTGGTTGGTTGATGTCCACAACAAGTTCGAGCTTTCCCCCGAAACATTCTACCTCACCATCAACATAATTGATCGCTTCCTTGCGAGGAAGGCAGTCCCAAGAAGGGAATTGCAGTTGTTGGGTATTGGGGCAATGCTCATAGCCTCCAAATACGAGGAGATCTGGGCGCCAGAGGTAAACGACTTCGTGTGCCTTTCAGATAGAGCGTACACGAATGAACAGATACTAATGATGGAGAAAAGGATACTTGGGAAGCTGGAATGGACCATGACTCTGCCTACTCCCTATGTTTTCCTCGCTCGGTTCATCAAGGCGTCGAAGGACTCCGATCACGAGATGGAAAATCTGGTATATTTTCTGGCAGAACTTGGCGTAATGCATTACAACACCTCAATAATGTACAGCCCATCAATGATTGCCGCCTCGGCAGTCTATGCCGCTCGATGCACGCTGAAGAAAAGCCCTGGTTGGGATGAGACCCTCAAACTGCACACTGGCTTCACAGAGCCTCAACTGATTGATTGTGCAAAGCATTTGGTGGGATTCCATGGGGCAGCAAGCAAGAACAAGCTGCAAGTAATATACAGAAAGTACTCCAGCTCCGAGAGGGGAGCGGTAGCATTGCTTCAGCCACCCAAAGCTCTCTTGGTGACTCCTAATGGTCATTGA 1365 48.21 MASRPVVPQQIRGEAEIGRGKQGKGGAAADARSRRALGDIGNLVTVRGIDAKVNRPITRSFCAQMLANAQAAAKAENNKKQVPVSVDGVAPILDGGVVAVKKPGAPKAATKKVVSKPKAAVIEISPDTVEKDRGKEVKCANKKKEEGVSKKKAQTLTAVMTARSKAACGVTKKPKEQIIDIDAADVGNELAEVEYVEDIYKFYKEVENESRPHDYMDSQPEINTSMRAILVDWLVDVHNKFELSPETFYLTINIIDRFLARKAVPRRELQLLGIGAMLIASKYEEIWAPEVNDFVCLSDRAYTNEQILMMEKRILGKLEWTMTLPTPYVFLARFIKASKDSDHEMENLVYFLAELGVMHYNTSIMYSPSMIAASAVYAARCTLKKSPGWDETLKLHTGFTEPQLIDCAKHLVGFHGAASKNKLQVIYRKYSSSERGAVALLQPPKALLVTPNGH 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2004731 2007203 - Cp4.1LG19g02430.1 Cpe19g00245 485653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00245 454 Pfam Cyclin, C-terminal domain 325 443 IPR004367 -
Cpe19g00245 454 Pfam Cyclin, N-terminal domain 198 322 IPR006671 -
Cpe19g00245 454 Gene3D - 198 439 - -
Cpe19g00245 454 CDD CYCLIN 323 412 IPR013763 -
Cpe19g00245 454 SMART cyclin_7 232 316 IPR013763 -
Cpe19g00245 454 SMART cyclin_7 329 413 IPR013763 -
Cpe19g00245 454 PANTHER CYCLINS 22 449 IPR039361 -
Cpe19g00245 454 SUPERFAMILY Cyclin-like 326 447 IPR036915 -
Cpe19g00245 454 PIRSF Cyclin_A_B_D_E 1 453 IPR039361 -
Cpe19g00245 454 Gene3D - 212 323 - -
Cpe19g00245 454 ProSitePatterns Cyclins signature. 227 258 IPR006671 -
Cpe19g00245 454 MobiDBLite consensus disorder prediction 1 32 - -
Cpe19g00245 454 SMART Cyclin_C_2 325 444 IPR004367 -
Cpe19g00245 454 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 22 449 - -
Cpe19g00245 454 SUPERFAMILY Cyclin-like 187 322 IPR036915 -
Cpe19g00245 454 CDD CYCLIN 226 315 IPR013763 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00905 Cpe-Chr15:8690452 Cpe19g00245 Cpe-Chr19:2004731 1.74E-61 dispersed
Cpe19g00245 Cpe-Chr19:2004731 Cpe19g00247 Cpe-Chr19:2025317 0 dispersed
Cpe19g00245 Cpe-Chr19:2004731 Cpe19g00246 Cpe-Chr19:2009694 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00245 K21777 - csv:101217210 716.457