Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe19g00246 | ATGGCTTCAAGACCAGTAGTTCCCCAACAAATCAGAGGTGATGAAGCGATCGGCGGAGGAAAGCAGGTGAAGGGCGGGGCGGCGGTGGATGCGAGGAACCGCAGAGCATTGGGTGATATTGGGAATCTGGTAACTGTTCGAGGAAATGACGCAAAGGCAAATCGCCCTATTACGAGGAGTTTCTGTGCTCAGTTGCTTGCCAATGCCCAAGCTGCTGCAAAAGCTGAAAATAATAAGAAATTAGTGCCTGTCAGTGTAGATGGGGCTGCTCCCATTCTTAATGATGGTATTGTGGCTGTTCGGAAGCCAAGAGCACCCAAGGCAGCACCCAAGAAAGTTGTTTCCAAACCGAAAGCGGAGGTGATCGAGATAAGCCCGGATACGGTCGAAAAAGATCGGGGCAAGGAAGTGAAATGTGGTAACAAGAAAAAGGAAGGAGAAGGGGTATCAAAGAAGAAGGCACAGACTCTCACCGCAGTCATGACGGCTAGAAGCAAGGCTGCTTGTGGTGTAACCAAGAAACCAAAGGAACAGATAATTGACATTGACGCAGCAGATGTTGGAAATGAGTTGGCAGAAGTGGAATATGTTGAGGACATTTATAAGTTCTATAAGGAAGTTGAGAATGAGAGTAGGCCTCATGACTATATGGATTCACAACCGGAGATAAACACTTCAATGAGAGCAATATTGGTGGATTGGTTGGTTGATGTCCACAACAAGTTCGAGCTTTCCCCCGAAACATTCTACCTCACCATCAACATAATTGATCGCTTCCTTGCGAGGAAGGCAGTCCCAAGAAGGGAATTGCAGTTGTTGGGTATTGGGGCAATGCTCATAGCCTCCAAATACGAGGAGATCTGGGCGCCAGAGGTAAACGACTTCGTGTGCCTTTCAGATAGAGCGTACACGAATGAACAGATACTAATGATGGAGAAAAGGATACTTGGGAAGCTGGAATGGACCATGACTCTGCCTACTCCCTATGTTTTCCTCGCTCGGTTCATCAAGGCGTCGAAGGACTCCGATCACGAGATGGAAAATCTGGTATATTTTCTGGCAGAACTTGGCATAATGCATTACAACACCTCAATAATGTACAGCCCATCAATGATTGCCGCCTCGGCAGTCTATGCCGCTCGATGCACGCTGAAGAAAAGCCCTGGTTGGGATGAGACCCTCAAACTGCACACTGGCTTCACAGAGCCTCAACTGATTGATTGTGCAAAGCATTTGGTGGGATTCCATGGAGCAGCAAGCAAGAACAAGCTTCAAGTAATATACAGAAAGTACTCCAGCTCCGAGAGGGGAGCGGTAGCGTTGCTTCAGCCACCCAAAGCTCTCTTGGTGGTGCCTCCTAATGGTCATTGA | 1371 | 47.99 | MASRPVVPQQIRGDEAIGGGKQVKGGAAVDARNRRALGDIGNLVTVRGNDAKANRPITRSFCAQLLANAQAAAKAENNKKLVPVSVDGAAPILNDGIVAVRKPRAPKAAPKKVVSKPKAEVIEISPDTVEKDRGKEVKCGNKKKEGEGVSKKKAQTLTAVMTARSKAACGVTKKPKEQIIDIDAADVGNELAEVEYVEDIYKFYKEVENESRPHDYMDSQPEINTSMRAILVDWLVDVHNKFELSPETFYLTINIIDRFLARKAVPRRELQLLGIGAMLIASKYEEIWAPEVNDFVCLSDRAYTNEQILMMEKRILGKLEWTMTLPTPYVFLARFIKASKDSDHEMENLVYFLAELGIMHYNTSIMYSPSMIAASAVYAARCTLKKSPGWDETLKLHTGFTEPQLIDCAKHLVGFHGAASKNKLQVIYRKYSSSERGAVALLQPPKALLVVPPNGH | 456 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 2009694 | 2013052 | + | Cp4.1LG19g02380.1 | Cpe19g00246 | 485654 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe19g00246 | 456 | CDD | CYCLIN | 324 | 413 | IPR013763 | - | |
Cpe19g00246 | 456 | SMART | cyclin_7 | 330 | 414 | IPR013763 | - | |
Cpe19g00246 | 456 | SMART | cyclin_7 | 233 | 317 | IPR013763 | - | |
Cpe19g00246 | 456 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Cpe19g00246 | 456 | SUPERFAMILY | Cyclin-like | 326 | 446 | IPR036915 | - | |
Cpe19g00246 | 456 | CDD | CYCLIN | 227 | 316 | IPR013763 | - | |
Cpe19g00246 | 456 | ProSitePatterns | Cyclins signature. | 228 | 259 | IPR006671 | - | |
Cpe19g00246 | 456 | Pfam | Cyclin, C-terminal domain | 326 | 444 | IPR004367 | - | |
Cpe19g00246 | 456 | Pfam | Cyclin, N-terminal domain | 199 | 323 | IPR006671 | - | |
Cpe19g00246 | 456 | SMART | Cyclin_C_2 | 326 | 445 | IPR004367 | - | |
Cpe19g00246 | 456 | Gene3D | - | 213 | 324 | - | - | |
Cpe19g00246 | 456 | PANTHER | CYCLINS | 21 | 450 | IPR039361 | - | |
Cpe19g00246 | 456 | PIRSF | Cyclin_A_B_D_E | 1 | 454 | IPR039361 | - | |
Cpe19g00246 | 456 | PANTHER | G2/MITOTIC-SPECIFIC CYCLIN S13-6 | 21 | 450 | - | - | |
Cpe19g00246 | 456 | SUPERFAMILY | Cyclin-like | 188 | 323 | IPR036915 | - | |
Cpe19g00246 | 456 | Gene3D | - | 199 | 440 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe19g00246 | Cpe-Chr19:2009694 | Cpe19g00895 | Cpe-Chr19:6525694 | 1.79E-80 | dispersed | |
Cpe20g00001 | Cpe-Chr20:590 | Cpe19g00246 | Cpe-Chr19:2009694 | 7.00E-42 | dispersed | |
Cpe19g00245 | Cpe-Chr19:2004731 | Cpe19g00246 | Cpe-Chr19:2009694 | 0 | tandem | |
Cpe19g00246 | Cpe-Chr19:2009694 | Cpe19g00247 | Cpe-Chr19:2025317 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe19g00246 | K21777 | - | csv:101217210 | 716.457 |