Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00247 ATGGCTACAAGACCAGTAGTTCCTCAACAAATCAGAGGTGAAGCGGCGATTGGAGGAGGAAAGCAGGGGAAGGGCGGGGCGGCGGTGGATGCAAGGAACCGCAGAGCATTGGGTGATATTGGGAATCTGGTAACTGTTCGAGGAATTGACGCAAAGGCTAATCGCCCTATTACAAGGAGTTTCTGTGCTCAGTTGCTTGCCAATGCTCAAGCGGCTGCAAAAGCTGGAAATAATATGAAACAAGTGCCTGTTAAAGTAGATGGGGCTGCTCCCATTCTTGATGGTGGTGTTGTGGCTGTTAAGAAAGCAGGAGCTCCCAAGGCTGCAACGAAGAAAGTTGTTTCCAAACCGAAAGCGGAGGTGATCGAGAGAAGCCCGGATAAGGTCGAACAAGATCGGGGCAAGGAAGTGAAATGTACTAACAAGAAAAAGGAAGAAGGGGTCTCAAAGAAGAAGGCACAGACTCTCACCGCAGTCATGACGGCTAGAAGCAAGGCTGCTTGTGGAGTAACCAAGAAACCAAAGGAACAGATAATTGACATTGACGCAGCAGATGTTGGAAATGAGTTGGCAGAAGTGGAATATGTTGAGGACATTTATAAGTTCTATAAGGAAGTTGAGAATGAGAGTAGGCCTCATGACTATATGGATTCACAACCGGAGATAAACACTTCAATGAGAGCAATATTGGTGGATTGGTTGGTTGATGTCCACAACAAGTTCGAGCTTTCCCCCGAAACATTCTACCTCACCATCAACATAATTGATCGCTTCCTTGCGAGGAAGGCAGTCCCAAGAAGGGAATTGCAGTTGTTGGGTATTGGGGCAATGCTCATAGCCTCCAAATACGAGGAGATCTGGGCGCCAGAGGTAAACGACTTCGTGTGCCTTTCAGATAGAGCGTACACGAATGAACAGATACTAATGATGGAGAAAAGGATACTTGGGAAGCTGGAATGGACCATGACTCTGCCTACTCCCTATGTTTTCCTCGCTCGGTTCATCAAGGCGTCGAAGGACTCCGATCACGAGATGGAAAATCTGGTATATTTTCTGGCAGAACTTGGCATAATGCATTACAACACCTCAATAATGTACAGCCCATCAATGATTGCCGCCTCGGCAGTCTATGCCGCTCGATGCACGCTGAAGAAAAGCCCTGGTTGGGATGAGACCCTCAAACTGCACACTGGCTTCACAGAGCCTCAACTGATTGATTGTGCAAAGCATTTGGTGGGATTCCATGGGGCAGCAAGCAAGAACAAGCTGCAAGTAATATACAGAAAGTACTCCAGCTCGGAGAGGGGAGCGGTAGCATTACTTCAGCCACCCAAAGCTCTCTTGGTGACTCCTAATGGTCATTGA 1365 47.77 MATRPVVPQQIRGEAAIGGGKQGKGGAAVDARNRRALGDIGNLVTVRGIDAKANRPITRSFCAQLLANAQAAAKAGNNMKQVPVKVDGAAPILDGGVVAVKKAGAPKAATKKVVSKPKAEVIERSPDKVEQDRGKEVKCTNKKKEEGVSKKKAQTLTAVMTARSKAACGVTKKPKEQIIDIDAADVGNELAEVEYVEDIYKFYKEVENESRPHDYMDSQPEINTSMRAILVDWLVDVHNKFELSPETFYLTINIIDRFLARKAVPRRELQLLGIGAMLIASKYEEIWAPEVNDFVCLSDRAYTNEQILMMEKRILGKLEWTMTLPTPYVFLARFIKASKDSDHEMENLVYFLAELGIMHYNTSIMYSPSMIAASAVYAARCTLKKSPGWDETLKLHTGFTEPQLIDCAKHLVGFHGAASKNKLQVIYRKYSSSERGAVALLQPPKALLVTPNGH 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2025317 2027757 + Cp4.1LG19g02390.1 Cpe19g00247 485655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00247 454 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 21 449 - -
Cpe19g00247 454 Pfam Cyclin, N-terminal domain 198 322 IPR006671 -
Cpe19g00247 454 Pfam Cyclin, C-terminal domain 325 443 IPR004367 -
Cpe19g00247 454 Gene3D - 198 439 - -
Cpe19g00247 454 PIRSF Cyclin_A_B_D_E 1 453 IPR039361 -
Cpe19g00247 454 CDD CYCLIN 323 412 IPR013763 -
Cpe19g00247 454 SMART cyclin_7 232 316 IPR013763 -
Cpe19g00247 454 SMART cyclin_7 329 413 IPR013763 -
Cpe19g00247 454 SUPERFAMILY Cyclin-like 325 445 IPR036915 -
Cpe19g00247 454 ProSitePatterns Cyclins signature. 227 258 IPR006671 -
Cpe19g00247 454 Gene3D - 212 323 - -
Cpe19g00247 454 MobiDBLite consensus disorder prediction 1 27 - -
Cpe19g00247 454 PANTHER CYCLINS 21 449 IPR039361 -
Cpe19g00247 454 SUPERFAMILY Cyclin-like 187 322 IPR036915 -
Cpe19g00247 454 CDD CYCLIN 226 315 IPR013763 -
Cpe19g00247 454 SMART Cyclin_C_2 325 444 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00711 Cpe-Chr10:4071282 Cpe19g00247 Cpe-Chr19:2025317 1.30E-81 dispersed
Cpe19g00245 Cpe-Chr19:2004731 Cpe19g00247 Cpe-Chr19:2025317 0 dispersed
Cpe19g00247 Cpe-Chr19:2025317 Cpe19g00895 Cpe-Chr19:6525694 5.37E-81 dispersed
Cpe19g00246 Cpe-Chr19:2009694 Cpe19g00247 Cpe-Chr19:2025317 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00247 K21777 - csv:101217210 711.064