Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00257 ATGTGTTTTCTTTCTTCGAATTGGAATAAACACGGAGAAACAGAGGAGGCATTTTCAAAACAAAGCGAGAAAATGGGAAGAAATAGTTTGAGAACCTTTGTTATGGTTGTGGTTATTGTTTTGACATCGTTGTTCGCCGTTGTTCCGACGTCTATGGCCCAGCTTCGGCAAGATTTTTACGCTGATGTTTGTCCTAACGTTGAGAGCATAGTTCGAAATGCTGTCACGAAGAAGTTCCGACAAACGTTTGTTACTGTTCCCGCCACCCTACGCCTCTTCTTTCACGACTGTTTTGTTCAAGGATGTGATGCGTCAGTAATGATTGGTTCGGACGGAGGTAATACAGTGGAGAAGGATCATCCTGATAACCTTTCATTAGCAGGAGATGGATTTGATACGGTGATTAAAGCGAAAGCTGCTGTGGACGCTGTGCCAGAATGTAGAAATAAAGTGTCGTGTGCCGATATTCTCGTGATGGCTACTCGAGATGTGATTTCATTGGCTCGAGGACCATCATATGCAGTGGAGCTAGGGAGAAAGGATGGGCTTGTTTCAAGGGCTTCAGATGTGGAAGGCAAATTGCCAAAGCCAAGCTTTAATCTCAATCAGCTCAATGCCATGTTTGCTGCCAATGGCCTTTCCCAGACTGACATGATTGCTCTCTCTGGTATCCATTTCCTTCCCTAA 687 44.54 MCFLSSNWNKHGETEEAFSKQSEKMGRNSLRTFVMVVVIVLTSLFAVVPTSMAQLRQDFYADVCPNVESIVRNAVTKKFRQTFVTVPATLRLFFHDCFVQGCDASVMIGSDGGNTVEKDHPDNLSLAGDGFDTVIKAKAAVDAVPECRNKVSCADILVMATRDVISLARGPSYAVELGRKDGLVSRASDVEGKLPKPSFNLNQLNAMFAANGLSQTDMIALSGIHFLP 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2135988 2136825 - Cp4.1LG19g02680.1 Cpe19g00257 485665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00257 228 PRINTS Plant peroxidase signature 169 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe19g00257 228 PRINTS Plant peroxidase signature 216 228 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe19g00257 228 PRINTS Plant peroxidase signature 64 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe19g00257 228 PRINTS Plant peroxidase signature 129 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe19g00257 228 PRINTS Plant peroxidase signature 150 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe19g00257 228 PRINTS Plant peroxidase signature 88 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe19g00257 228 PANTHER PEROXIDASE 50-RELATED 32 226 - -
Cpe19g00257 228 PRINTS Haem peroxidase superfamily signature 86 100 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe19g00257 228 PRINTS Haem peroxidase superfamily signature 169 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe19g00257 228 PRINTS Haem peroxidase superfamily signature 151 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe19g00257 228 PRINTS Haem peroxidase superfamily signature 217 228 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe19g00257 228 ProSitePatterns Peroxidases active site signature. 86 97 IPR019794 GO:0004601
Cpe19g00257 228 Gene3D - 58 194 - -
Cpe19g00257 228 SUPERFAMILY Heme-dependent peroxidases 54 225 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cpe19g00257 228 Pfam Peroxidase 71 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe19g00257 228 Gene3D Peroxidase, domain 2 195 225 - -
Cpe19g00257 228 PANTHER - 32 226 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe19g00257 228 ProSiteProfiles Plant heme peroxidase family profile. 54 228 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01727 Cpe-Chr1:11829491 Cpe19g00257 Cpe-Chr19:2135988 1.00E-91 dispersed
Cpe02g00404 Cpe-Chr2:2253963 Cpe19g00257 Cpe-Chr19:2135988 3.67E-68 dispersed
Cpe13g01124 Cpe-Chr13:8998396 Cpe19g00257 Cpe-Chr19:2135988 4.17E-79 dispersed
Cpe19g00257 Cpe-Chr19:2135988 Cpe09g00820 Cpe-Chr9:7586042 1.41E-48 dispersed
Cpe19g00257 Cpe-Chr19:2135988 Cpe19g00661 Cpe-Chr19:5296903 4.00E-105 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00257 K00430 - csv:101208254 339.732