Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00283 ATGGCTTCCCAAACAGAGCCTTGGCTACTGGAGAACGGCAGCGTTAAGTGCTTAACCAAAGAGAACCGACAAGGCCATGGCCGAAGCCTTCGGACAGCTCACAACATGTCGTCCTCTTCCCTCCGCATAAAGTCCGATTTGACCCTCGTCTCCAAACTCCAATTCCCCTGCCTTAGGAACTTCCTCGCTCATCTTCAGGAGGTCCTTTTGGGAACTAAGCTTTCCGTTCTCTTCCCTGCCATTCCGCTAGCCGTTCTGGCTCAGAGTTGTGCCTTTGGAAGACCTTGGATTTTTGCTTTGAGTTTGCTTGGCCTCACGCCATTGGCTGAACTTGGAGGGCTTTTGAATGCAACGTGTGGGAATGCAACAGAGATGATAATAGCAATTCTTGCACTTACAAAGGGAAAGATAGAAGTGGTGAAGTATTCTCTTTTGGGCTCTGTTCTTTCAAACCTTCTTCTTGTTCTTGGAACCTCTCTCTTCTCTGCTGGCATTGCCAATCTATCAACCCATCAAATTTTTGATAGAAGACAGGCAGATGTGAACTCACTGATGCTGATGCTGTCATTTCTGTGCCATTTATTGCCGTTATTATTTGGGTACGCCGCCACCACCTCCGCCGTCGCAGCCGCCGCCTCCACCCTCCACCTGTCCAGAGCCAGCAGCATCGTTATGCTCTTGGCTTACATTGCTTACTTGGTCTTCCAACTCTGGACTCACCGCCAATCATTTGAAGCCCAGGAGGATGAAAACGACGACGTACCAGGAGAAGAGGCAGTTATTGGATTCTGGAGTGCATTTGCATGGCTTGTAGGAATGACACTCCTGATTGCTTTGCTGTCGGAATACGTTGTCAACACAATTGAGGAAGCATCAACTACTTGGGATTTGTCGGTGAGTTTCCTCAGCATAATCTTGCTCCCTATCGTCGGGAATGCAGCCGAACACGCCGGAGCTATCATCTTTGCCTTAAAAAATAAGTTGGACATAAGTTTGGGGGTTGCTTTGGGGTCAGCAACACAAATTGCACTTTTTGTGATTCCACTGTGTGTGATCGTTGCTTGGACAATGGGAGTGGATATGGATCTAAATTTCAACCTCATGGAAACGGCGTCGCTTGGATTAGCCATTATTACCACAGCCTTCGCCTTACAAGATGGAACCTCTCACTATATTAAAGGCCTTGTTCTTCTGTTATGTTATGTTATTATTGCGGCTTGTTTCTTTGTCTCCAACACTCAACAAGATGGTATCAATATCCCCAATTTGGAAATCCAATCTAGAAGAATTCTCTTGAAGTCTCCT 1305 46.82 MASQTEPWLLENGSVKCLTKENRQGHGRSLRTAHNMSSSSLRIKSDLTLVSKLQFPCLRNFLAHLQEVLLGTKLSVLFPAIPLAVLAQSCAFGRPWIFALSLLGLTPLAELGGLLNATCGNATEMIIAILALTKGKIEVVKYSLLGSVLSNLLLVLGTSLFSAGIANLSTHQIFDRRQADVNSLMLMLSFLCHLLPLLFGYAATTSAVAAAASTLHLSRASSIVMLLAYIAYLVFQLWTHRQSFEAQEDENDDVPGEEAVIGFWSAFAWLVGMTLLIALLSEYVVNTIEEASTTWDLSVSFLSIILLPIVGNAAEHAGAIIFALKNKLDISLGVALGSATQIALFVIPLCVIVAWTMGVDMDLNFNLMETASLGLAIITTAFALQDGTSHYIKGLVLLLCYVIIAACFFVSNTQQDGINIPNLEIQSRRILLKSP 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2455207 2458654 + Cp4.1LG19g02840.1 Cpe19g00283 485691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00283 435 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 4 421 - -
Cpe19g00283 435 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 4 421 IPR004713 GO:0006812|GO:0008324|GO:0016021
Cpe19g00283 435 TIGRFAM caca2: calcium/proton exchanger 60 409 - -
Cpe19g00283 435 Pfam Sodium/calcium exchanger protein 266 407 IPR004837 GO:0016021|GO:0055085
Cpe19g00283 435 Pfam Sodium/calcium exchanger protein 111 238 IPR004837 GO:0016021|GO:0055085
Cpe19g00283 435 Gene3D - 259 410 IPR044880 -
Cpe19g00283 435 Gene3D - 110 258 IPR044880 -
Cpe19g00283 435 TIGRFAM cax: calcium/proton exchanger 110 409 IPR004798 GO:0006816|GO:0015369
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00953 Cpe19g00283 CCT
Cpe08g01222 Cpe19g00283 CCT
Cpe08g01222 Cpe19g00283 ECH
Cpe10g00953 Cpe19g00283 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00366 Cpe-Chr16:5336225 Cpe19g00283 Cpe-Chr19:2455207 2.48E-84 dispersed
Cpe19g00283 Cpe-Chr19:2455207 Cpe02g01752 Cpe-Chr2:14286057 9.26E-94 dispersed
Cpe02g01178 Cpe-Chr2:10703036 Cpe19g00283 Cpe-Chr19:2455207 1.14E-70 transposed
Cpe10g00953 Cpe-Chr10:5356035 Cpe19g00283 Cpe-Chr19:2455207 0 wgd
Cpe19g00283 Cpe-Chr19:2455207 Cpe08g01222 Cpe-Chr8:8906933 5.52E-147 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00283 K07300 - csv:101213857 654.825