Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe19g00296 | ATGCGGGTTGTTTTGAATATTGGGTTACCAGTGAAGTTCACGACTTTCCAGTGTTTGAGGAATTGTGAGGAGCGAGAAGAAAGAAAAAGACGGTTGAAGAGAGATCGCTCTATTGAGAGACCGGTGCATGAATACCAGCAACCTGCACGGGATCAGTTTTACCCTGCTAAAAACCAAAAATATGATAGAAACAGGCTTCCCCCAGGTTGGTTGGATTGCCCTGCATTTGGTCAAGAAATATGCTGCATGATTCCTTCCAAGGTTCCTCTGGGTGAATCCTTCAATGATTGTATAACACCTGGTAAAAGATACTCGTTTAAGCAAGTGATCCATCAGCAGAGAGTTTGGGGAAGGAAAATTCCTTGCAAGGGGAGAGATTCTGTACCTGACAACAAGTCAGTCAATATGTTTGTTTACGAGGTCATTCAGTTCCTTTCTCGTCAGAAACATTCAAAGAAGTATATTCTTGTCCATTGCACTCATGGCCATAATCGCACTGGATATATGATCATAAATTATCTTGTGCGTGCACTATCCATTTCTGTTACCCAGGCTCTTAAAACGTTTTCCGATGCACGGCCTCCTGGAATTTACAAGCCAGACTACATTGATGCATTATATGCCTTTTATCATGAAAAAAAACCTGAAATGGTTGTTTGCCCACCCACGCCCGAGTGGAAGAGATCTTCAGATCTTGATCTTAATGGTGAAGCAGTTCCGGATGACGACGATGATGGGGGTTCTGCCGCTCCTTTGAATGAAAATCATGATGATGGTACTCAAATGATGACAAATGATGATATATTGGGAGATGAGATACCTGAGGACCAGGAACGTGCTTTAAAACACTTTTGCTATCAAATGCTTAAATTGAATGCTGGAGCAAGAGCAAATTTGCAATTTCCAGGGTCACATCCAGTGTCTCTTAACAGAGACAATCTGCAACTGCTAAGGCAACGCTATTATTATGCCACGTGGAAAGCTGATGGAACAAGATATATGATGCTCATAACCGTGGATGGATGCTACTTGATAGACAGGGGTTTTAAATTTCGAAGAGTCCAAATGAGATTTCCTTGCAGAAATGCGAATGATGGACTAGTTGAAAAAAGTCACCACTTTACACTACTTGATGGAGAGATGATAATCGATACTGTGCCAGACTCGCAGAAGCAGGAGAGAAGATACCTTATCTATGATATGATGGCAATTAATCATGTTTCAGTTATTGAGCGTCCTTTCTATGAACGATGGAAGATGCTTGAGAAAGAAGTGATTGAACCTCGCAATTATGAGCGCCAGAATATTTACCAAAGCAGAAACCTTCATTACAGATATGACCTAGAGCCATTTAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTACAGTTACCAAACTTTTGAAGGAGTTCATACCGAGGCTTTCACATGATGCCGATGGTCTAATATTTCAGGGGTGGGATGATGCTTATGTTCCTCGAACTCATGAGGGTCTTTTGAAGTGGAAATATCCTGAAATGAACTCAGTCGACTTCCTATTTGAGGTTTTGGGTGAAGATGATTCTCAGATTCTTATTTTGTTCGAACGTGGAAAGAGGAAAACGATGGATGGAAATAGGGTTAAGTTCAAAGATGGCGATCCCTCCTTTTATTCAGGAAAGATTGTTGAGTGTTCTTGGGATTCTGATGAGCAAGTATGGGTCTGCATGCGTATCAGGACAGACAAAACAACTCCTAATGATTTCAATACTTATAAAAAGGTCATGCGCAGCATTAGAGACAATATCACGGAGGAGGATTTGTTGAAGGAGATTCACGAGATAATACGCTTGCCCATGTATGCTGATAGGATAAGGAATGATAGTAAAGCGGCTCAACATACGAATTCAACACGACGGAGGTGA | 1905 | 41.42 | MRVVLNIGLPVKFTTFQCLRNCEEREERKRRLKRDRSIERPVHEYQQPARDQFYPAKNQKYDRNRLPPGWLDCPAFGQEICCMIPSKVPLGESFNDCITPGKRYSFKQVIHQQRVWGRKIPCKGRDSVPDNKSVNMFVYEVIQFLSRQKHSKKYILVHCTHGHNRTGYMIINYLVRALSISVTQALKTFSDARPPGIYKPDYIDALYAFYHEKKPEMVVCPPTPEWKRSSDLDLNGEAVPDDDDDGGSAAPLNENHDDGTQMMTNDDILGDEIPEDQERALKHFCYQMLKLNAGARANLQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITVDGCYLIDRGFKFRRVQMRFPCRNANDGLVEKSHHFTLLDGEMIIDTVPDSQKQERRYLIYDMMAINHVSVIERPFYERWKMLEKEVIEPRNYERQNIYQSRNLHYRYDLEPFRVRRKDFWLLSTVTKLLKEFIPRLSHDADGLIFQGWDDAYVPRTHEGLLKWKYPEMNSVDFLFEVLGEDDSQILILFERGKRKTMDGNRVKFKDGDPSFYSGKIVECSWDSDEQVWVCMRIRTDKTTPNDFNTYKKVMRSIRDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR | 634 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 2569420 | 2581929 | - | Cp4.1LG19g03110.1 | Cpe19g00296 | 485704 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe19g00296 | 634 | PANTHER | MRNA-CAPPING ENZYME | 23 | 120 | - | - | |
Cpe19g00296 | 634 | Pfam | Dual specificity phosphatase, catalytic domain | 131 | 210 | IPR000340 | GO:0008138|GO:0016311 | |
Cpe19g00296 | 634 | Gene3D | DNA ligase/mRNA capping enzyme | 264 | 501 | - | - | |
Cpe19g00296 | 634 | Pfam | mRNA capping enzyme, catalytic domain | 305 | 503 | IPR001339 | GO:0004484|GO:0005524|GO:0006370 | |
Cpe19g00296 | 634 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 135 | 204 | IPR000387 | GO:0016311|GO:0016791 | |
Cpe19g00296 | 634 | CDD | Adenylation_mRNA_capping | 298 | 504 | IPR001339 | GO:0004484|GO:0005524|GO:0006370 | |
Cpe19g00296 | 634 | Pfam | mRNA capping enzyme, C-terminal domain | 508 | 602 | IPR013846 | - | |
Cpe19g00296 | 634 | PANTHER | MRNA-CAPPING ENZYME | 119 | 634 | - | - | |
Cpe19g00296 | 634 | MobiDBLite | consensus disorder prediction | 230 | 267 | - | - | |
Cpe19g00296 | 634 | PANTHER | MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED | 23 | 120 | - | - | |
Cpe19g00296 | 634 | SUPERFAMILY | DNA ligase/mRNA capping enzyme, catalytic domain | 265 | 504 | - | - | |
Cpe19g00296 | 634 | Gene3D | Protein tyrosine phosphatase superfamily | 62 | 247 | IPR029021 | - | |
Cpe19g00296 | 634 | ProSiteProfiles | ATP-dependent DNA ligase family profile. | 387 | 533 | IPR012310 | GO:0003910|GO:0005524|GO:0006281|GO:0006310 | |
Cpe19g00296 | 634 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 66 | 227 | IPR029021 | - | |
Cpe19g00296 | 634 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 157 | 167 | IPR016130 | GO:0016311|GO:0016791 | |
Cpe19g00296 | 634 | SUPERFAMILY | Nucleic acid-binding proteins | 506 | 619 | IPR012340 | - | |
Cpe19g00296 | 634 | PIRSF | mRNA_capping_HCE | 54 | 121 | IPR017074 | GO:0004484|GO:0006370|GO:0140818 | |
Cpe19g00296 | 634 | PIRSF | mRNA_capping_HCE | 115 | 634 | IPR017074 | GO:0004484|GO:0006370|GO:0140818 | |
Cpe19g00296 | 634 | PANTHER | MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED | 119 | 634 | - | - | |
Cpe19g00296 | 634 | Gene3D | - | 502 | 611 | IPR012340 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe10g00935 | Cpe19g00296 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe10g00935 | Cpe-Chr10:5221979 | Cpe19g00296 | Cpe-Chr19:2569420 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe19g00296 | K13917 | - | csv:101209960 | 1144.03 |