Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00296 ATGCGGGTTGTTTTGAATATTGGGTTACCAGTGAAGTTCACGACTTTCCAGTGTTTGAGGAATTGTGAGGAGCGAGAAGAAAGAAAAAGACGGTTGAAGAGAGATCGCTCTATTGAGAGACCGGTGCATGAATACCAGCAACCTGCACGGGATCAGTTTTACCCTGCTAAAAACCAAAAATATGATAGAAACAGGCTTCCCCCAGGTTGGTTGGATTGCCCTGCATTTGGTCAAGAAATATGCTGCATGATTCCTTCCAAGGTTCCTCTGGGTGAATCCTTCAATGATTGTATAACACCTGGTAAAAGATACTCGTTTAAGCAAGTGATCCATCAGCAGAGAGTTTGGGGAAGGAAAATTCCTTGCAAGGGGAGAGATTCTGTACCTGACAACAAGTCAGTCAATATGTTTGTTTACGAGGTCATTCAGTTCCTTTCTCGTCAGAAACATTCAAAGAAGTATATTCTTGTCCATTGCACTCATGGCCATAATCGCACTGGATATATGATCATAAATTATCTTGTGCGTGCACTATCCATTTCTGTTACCCAGGCTCTTAAAACGTTTTCCGATGCACGGCCTCCTGGAATTTACAAGCCAGACTACATTGATGCATTATATGCCTTTTATCATGAAAAAAAACCTGAAATGGTTGTTTGCCCACCCACGCCCGAGTGGAAGAGATCTTCAGATCTTGATCTTAATGGTGAAGCAGTTCCGGATGACGACGATGATGGGGGTTCTGCCGCTCCTTTGAATGAAAATCATGATGATGGTACTCAAATGATGACAAATGATGATATATTGGGAGATGAGATACCTGAGGACCAGGAACGTGCTTTAAAACACTTTTGCTATCAAATGCTTAAATTGAATGCTGGAGCAAGAGCAAATTTGCAATTTCCAGGGTCACATCCAGTGTCTCTTAACAGAGACAATCTGCAACTGCTAAGGCAACGCTATTATTATGCCACGTGGAAAGCTGATGGAACAAGATATATGATGCTCATAACCGTGGATGGATGCTACTTGATAGACAGGGGTTTTAAATTTCGAAGAGTCCAAATGAGATTTCCTTGCAGAAATGCGAATGATGGACTAGTTGAAAAAAGTCACCACTTTACACTACTTGATGGAGAGATGATAATCGATACTGTGCCAGACTCGCAGAAGCAGGAGAGAAGATACCTTATCTATGATATGATGGCAATTAATCATGTTTCAGTTATTGAGCGTCCTTTCTATGAACGATGGAAGATGCTTGAGAAAGAAGTGATTGAACCTCGCAATTATGAGCGCCAGAATATTTACCAAAGCAGAAACCTTCATTACAGATATGACCTAGAGCCATTTAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTACAGTTACCAAACTTTTGAAGGAGTTCATACCGAGGCTTTCACATGATGCCGATGGTCTAATATTTCAGGGGTGGGATGATGCTTATGTTCCTCGAACTCATGAGGGTCTTTTGAAGTGGAAATATCCTGAAATGAACTCAGTCGACTTCCTATTTGAGGTTTTGGGTGAAGATGATTCTCAGATTCTTATTTTGTTCGAACGTGGAAAGAGGAAAACGATGGATGGAAATAGGGTTAAGTTCAAAGATGGCGATCCCTCCTTTTATTCAGGAAAGATTGTTGAGTGTTCTTGGGATTCTGATGAGCAAGTATGGGTCTGCATGCGTATCAGGACAGACAAAACAACTCCTAATGATTTCAATACTTATAAAAAGGTCATGCGCAGCATTAGAGACAATATCACGGAGGAGGATTTGTTGAAGGAGATTCACGAGATAATACGCTTGCCCATGTATGCTGATAGGATAAGGAATGATAGTAAAGCGGCTCAACATACGAATTCAACACGACGGAGGTGA 1905 41.42 MRVVLNIGLPVKFTTFQCLRNCEEREERKRRLKRDRSIERPVHEYQQPARDQFYPAKNQKYDRNRLPPGWLDCPAFGQEICCMIPSKVPLGESFNDCITPGKRYSFKQVIHQQRVWGRKIPCKGRDSVPDNKSVNMFVYEVIQFLSRQKHSKKYILVHCTHGHNRTGYMIINYLVRALSISVTQALKTFSDARPPGIYKPDYIDALYAFYHEKKPEMVVCPPTPEWKRSSDLDLNGEAVPDDDDDGGSAAPLNENHDDGTQMMTNDDILGDEIPEDQERALKHFCYQMLKLNAGARANLQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITVDGCYLIDRGFKFRRVQMRFPCRNANDGLVEKSHHFTLLDGEMIIDTVPDSQKQERRYLIYDMMAINHVSVIERPFYERWKMLEKEVIEPRNYERQNIYQSRNLHYRYDLEPFRVRRKDFWLLSTVTKLLKEFIPRLSHDADGLIFQGWDDAYVPRTHEGLLKWKYPEMNSVDFLFEVLGEDDSQILILFERGKRKTMDGNRVKFKDGDPSFYSGKIVECSWDSDEQVWVCMRIRTDKTTPNDFNTYKKVMRSIRDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRR 634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2569420 2581929 - Cp4.1LG19g03110.1 Cpe19g00296 485704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00296 634 PANTHER MRNA-CAPPING ENZYME 23 120 - -
Cpe19g00296 634 Pfam Dual specificity phosphatase, catalytic domain 131 210 IPR000340 GO:0008138|GO:0016311
Cpe19g00296 634 Gene3D DNA ligase/mRNA capping enzyme 264 501 - -
Cpe19g00296 634 Pfam mRNA capping enzyme, catalytic domain 305 503 IPR001339 GO:0004484|GO:0005524|GO:0006370
Cpe19g00296 634 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 135 204 IPR000387 GO:0016311|GO:0016791
Cpe19g00296 634 CDD Adenylation_mRNA_capping 298 504 IPR001339 GO:0004484|GO:0005524|GO:0006370
Cpe19g00296 634 Pfam mRNA capping enzyme, C-terminal domain 508 602 IPR013846 -
Cpe19g00296 634 PANTHER MRNA-CAPPING ENZYME 119 634 - -
Cpe19g00296 634 MobiDBLite consensus disorder prediction 230 267 - -
Cpe19g00296 634 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 23 120 - -
Cpe19g00296 634 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 265 504 - -
Cpe19g00296 634 Gene3D Protein tyrosine phosphatase superfamily 62 247 IPR029021 -
Cpe19g00296 634 ProSiteProfiles ATP-dependent DNA ligase family profile. 387 533 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Cpe19g00296 634 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 66 227 IPR029021 -
Cpe19g00296 634 ProSitePatterns Tyrosine specific protein phosphatases active site. 157 167 IPR016130 GO:0016311|GO:0016791
Cpe19g00296 634 SUPERFAMILY Nucleic acid-binding proteins 506 619 IPR012340 -
Cpe19g00296 634 PIRSF mRNA_capping_HCE 54 121 IPR017074 GO:0004484|GO:0006370|GO:0140818
Cpe19g00296 634 PIRSF mRNA_capping_HCE 115 634 IPR017074 GO:0004484|GO:0006370|GO:0140818
Cpe19g00296 634 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 119 634 - -
Cpe19g00296 634 Gene3D - 502 611 IPR012340 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00935 Cpe19g00296 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00935 Cpe-Chr10:5221979 Cpe19g00296 Cpe-Chr19:2569420 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00296 K13917 - csv:101209960 1144.03