Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00335 ATGGAAACCAATCTTCCCCTTCTCTTTCTTCTCATTTTGCTCTCAATCTTCCTCTCCTGCTCCGCCAAGCGCTGCCCGGACTGCGGCCGCACGCCGGTGCCGTACCCACTCAGCACACGCCCAGATTGCGGTGACCCTCTTTACAGAGTTCGGTGCACCGCCGGCGTGCTCTGGTTCGAGTCCGTCAATGGGTCTTCCTATTTGATCACTTCCGTTAATCCGGTGGCCCAGAGGTTGATTATCCGGCCACCGGGGTTGGCGAAAAACGCCTGCGTTTCATCGGATTTTGGGAGCCATGGATTTTGGCTCGACACCGGCCATCCTTTCACCATTACCAATAGAAACACGGTTTTACTCTTCAATTGTTCGATGGAAGTCCTGGAAAATAGTTGGAACTGTTCGGCTAATAGCGTCTGTCATGACTACATCAAGCAGAATCCGGTGGTCATGGGGGCGTGTAAGGCGGCGCCGACGTGCTGTTGGTATACAAGTGGAGGGTCCATTACTGAGTACAGAATCAGGGTGCGGAAGGAGCGGTGTTCGGCTTATGAATGTTTTGTGAATTTGGGTGGTTCTGTTCCGGCGAAGAAGAAGTGGCCAGAATCTGGGGTGGAGATTCAATGGGCACCTCCGCGAGAGCCGCCGTGTCGAGTGGCTGCAGACTGCCGGAATTGGGAGAATTCTGCTTGTTTGCCGGAACCTGCAAATGCTCGCCAGAGGAGGTGCTTCTGCAAGGTGCCTTTCAAGTGGGATCCTGTTAATGGCTTGTGTAATGGCAACAATGCAAAAATACAGAACAAGAGAATTCACAAGAAGCATAAGAAGATGCCTGCTATTCTTGGAGCAATGGCTGGAGTGATCGTCGTGGTGATTGGTGGCTCGACCATGTTTATAATTTTCAAAAGACGTCAACAGATTCCGAAAGGGAACGAACTCAGTTCGAAACAAGTTCGTGAAGTGATTCTAACAGCCAACAGCAGTGGCAAATCGGCGAGGATGTTCACAACCAAAGAGATAGCAAAGGCTACAAACAACTTCTCGAAAGAGAACTTGCTTGGCTCTGGTGGCTATGGAGAGGTTTTCAAAGGCAGCTTAGAAGATGGAACCTTAGTAGCTGTTAAGCGCGCCAAGTTGGGGTGCATGAAGGGTATCGATCAAATCTTAAACGAAGTTCGAATTCTCTGTCAAGTGAACCATCGATGCCTTGTTCGTCTACTTGGATGCTGCCTCGAACTCGAGCAACCCCTGCTAATATATGAGTACATCTCAAATGGGAACCTATTTGATCACCTTCATGGTAATACAAGTTCAAGTAAATGGCCACCGTTGACATTGAGTCGTCGACTCTACATTGCTCGCCAAACAGCTGATGGCCTTGCCTATCTACACACTTCAGCCATGCCAAGAATCTATCACCGAGATATAAAGTCAAGCAATATTCTACTAGACGAGAAGTTGAATGCTAAAGTTGCTGATTTCGGGCTTTCTAGACTGGCTGTTACTGAATCAAGCCATATTACAACTGGGGCTCAGGGAACATTAGGTTATCTAGACCCGGAATATTACTTAAACTTTCAATTGACAGACAAGAGCGATGTTTATAGTTTTGGAGTTGTCATGCTCGAGCTGTTGACTTCGGAGAAAGCCATTGATTTTAACAGAGAAGAGGAAGATGTAAACTTAGTAGTTTATATCAAGAAGATTATCAAAGAAGACAGATTGATGGAAGTTGTTGATCCTGTGATCAAACAGAGAGCAAGCAGAGTTCAAATAGAGATAATGAAGGCATTAGGGTCTCTAGCAGCAGCTTGCTTGGATGAAAAGAGGCAAAACAGACCTACAATGAAAGAAGTTGCTGATGAGCTAGCCAACATTATTTGTGTTCTTAACAGAGAGATTCCAAATATTGACGAACTGTAA 1920 46.67 METNLPLLFLLILLSIFLSCSAKRCPDCGRTPVPYPLSTRPDCGDPLYRVRCTAGVLWFESVNGSSYLITSVNPVAQRLIIRPPGLAKNACVSSDFGSHGFWLDTGHPFTITNRNTVLLFNCSMEVLENSWNCSANSVCHDYIKQNPVVMGACKAAPTCCWYTSGGSITEYRIRVRKERCSAYECFVNLGGSVPAKKKWPESGVEIQWAPPREPPCRVAADCRNWENSACLPEPANARQRRCFCKVPFKWDPVNGLCNGNNAKIQNKRIHKKHKKMPAILGAMAGVIVVVIGGSTMFIIFKRRQQIPKGNELSSKQVREVILTANSSGKSARMFTTKEIAKATNNFSKENLLGSGGYGEVFKGSLEDGTLVAVKRAKLGCMKGIDQILNEVRILCQVNHRCLVRLLGCCLELEQPLLIYEYISNGNLFDHLHGNTSSSKWPPLTLSRRLYIARQTADGLAYLHTSAMPRIYHRDIKSSNILLDEKLNAKVADFGLSRLAVTESSHITTGAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVMLELLTSEKAIDFNREEEDVNLVVYIKKIIKEDRLMEVVDPVIKQRASRVQIEIMKALGSLAAACLDEKRQNRPTMKEVADELANIICVLNREIPNIDEL 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2960450 2962557 - Cp4.1LG19g03320.1 Cpe19g00335 485743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00335 639 Gene3D Transferase(Phosphotransferase) domain 1 422 632 - -
Cpe19g00335 639 ProSiteProfiles Protein kinase domain profile. 346 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe19g00335 639 SUPERFAMILY Protein kinase-like (PK-like) 329 622 IPR011009 -
Cpe19g00335 639 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Cpe19g00335 639 Gene3D Phosphorylase Kinase; domain 1 308 421 - -
Cpe19g00335 639 Pfam Protein tyrosine and serine/threonine kinase 349 622 IPR001245 GO:0004672|GO:0006468
Cpe19g00335 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Cpe19g00335 639 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 628 IPR045274 GO:0007166
Cpe19g00335 639 SMART serkin_6 346 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe19g00335 639 CDD STKc_IRAK 352 625 - -
Cpe19g00335 639 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 15 24 628 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe19g00335 Cpe-Chr19:2960450 Cpe20g00131 Cpe-Chr20:727800 1.05E-13 dispersed
Cpe11g00892 Cpe-Chr11:7192420 Cpe19g00335 Cpe-Chr19:2960450 2.68E-38 transposed
Cpe13g01098 Cpe-Chr13:8857398 Cpe19g00335 Cpe-Chr19:2960450 0 transposed
Cpe16g00644 Cpe-Chr16:6859228 Cpe19g00335 Cpe-Chr19:2960450 2.43E-56 wgd
Cpe19g00335 Cpe-Chr19:2960450 Cpe05g00949 Cpe-Chr5:6209029 6.03E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63027 PF07714 PK_Tyr_Ser-Thr 3.50E-46 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00335 - - csv:101204219 1116.68