Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00351 ATGATGGCGGTTTCGGCCACTCCTTCTATTATCTCCCACCCGACCCACATACTATCTCCTCTTCTAAAGATTTCTCCGACGAGTATATCTCTCCGGCAACCACCATTTTTCGGTCGATTTCCGGCGCTTCTCACCACGTTTGATCGGGCTGCTGCTTTTGATTGCTCGAATTCCTTCGCCTCCGTGCCGTTGCAGCCGGTGCCTCGCCACTCGGTGTCGGGAAATTCCGGCGGATTCCCTTATTCGGGTCCGATTGAGAGAGGGTTTTTATCTGGACCCTTGGCCAGCCGGAACGAATCGGGTCCTATTGATCGTGGGGTTTGTTCTGGCCCGATTGAAAAGAGCGGCGTTGGACCCGAGAAATTACGGCGGAGCTTCTCTCACAGCGGCGTTGGAGATAGACAACCCAAATCGAAAAGAAGAAGTCTCATTCGGATTCTGAAGAAAGCCATATCCAAAACCATTTCTCGAAACCAGAAGGCTGTGAGTTCGAGAGTGAGAGAATCGGAATCGTACAAACACAACGAAAATGCCGCAGCTACTCAGACTCAAAGCAGTGTCCATTTGAGCAGCCATGCGAGCTTGGCGCCGGAAGACGACGGCGATTACTTTCTCGGCGGTCAGAGCGTACAGTGGGCACAGGGGAAGGCCGGTGAGGACAGAGTTCACGTGGTGATTTCCGAGGACAATGGTTGGGTTTTCGTCGGAATTTACGACGGATTCAACGGCCCTGATGCTCCTGATTACTTACTCGCTAATCTCTATGCTGCCGTTCTAAAAGAACTCAAGGGTTTAATTTGGAATGATAAGTTTGATTCTACTGCAACTTCGTCCTCCATGAACTCATCAAACTCTGCTTCAATTGAGGAAGAAGATGGAACAACCCACCTGAAAAATCATCAATCTACAGAGAATTTCCCTGCGGGAAACAAGATGGTGAATTTGGAAGCTGAATCGATGAGGAAAAGAGAGAGAGTTTATAATACAAACTACAGGACGAGCCAGCTGATGAAGAGGGCTGATCAGAATCCCAAGACATGGAAATGTGAATGGGAAAGGGAAAGATTAGAATTCGACGGGAAGATGAACAATAAACAATTAGATCATCATCACCAAATATGGGATGAATCAACAGCAATCAATCATTCTGAAGTGTTAAATGCTCTGTCTCAAGCATTGAGAAAAACAGAGGAAGCATATCTACAAAATGCAGACAAGATGGTAACAAGAAACCCTGAGCTAGCTCTTATGGGTTCTTGTGTTTTGGTCATGTTGATGAGAGGAGAAGATGTGTACTTGATGAATGTCGGAGACAGCCGTGCTATTGTAGCGCAGCAGCTCGAACCGGATTTCGGGATTGGAAAGCAATACAGAGACTTGGAGAGAATCAATGAAGGAACACTACGAGTATTTGAATCCTCTAATGGTGTGGAGTTTGAAAGATTAACAACCTTAGCTTCCCATCAGCTTACAATGGACCACAGCACCTACACAGAGGAGGAAGTCCAGAGGATCAAGAAGGCTCATCCCAACGATGCTTCAGCAATTATGAACGACAGGGTGAAAGGTTATTTGAAAATTACTCGGGCTTTTGGAGCTGGCTTTCTCAAACAGCCAAAGTGGAATGATGCACTGCTAGAGATGTTCAGAATAGACTATGTGGGAAATTCACCTTACATCACCTGTGATCCAACACTCTGCCATTACAAACTCAGCCCAACAGACAGATTCTTGATACTATCCTCTGATGGACTCTACCAGTACTTCACCAACGAAGAAGCTGTTTCTCAAGTAGAGTCCTTCATTGCTGCTTTTCCTGAAGGAGATCCTGCTCAACATCTAATAGAAGAAGTACTGTTCCGAGCAGCGAAAAAATACGGAATGGACTTCCATGAGCTGCTCGACATCCCACAAGGGGAGCGGCGGAAGTACCACGACGACGTTTCGGTAATCATCATTTCATTCGAAGGGAGAATCTGGCATTCATTGATGTAA 1995 46.42 MMAVSATPSIISHPTHILSPLLKISPTSISLRQPPFFGRFPALLTTFDRAAAFDCSNSFASVPLQPVPRHSVSGNSGGFPYSGPIERGFLSGPLASRNESGPIDRGVCSGPIEKSGVGPEKLRRSFSHSGVGDRQPKSKRRSLIRILKKAISKTISRNQKAVSSRVRESESYKHNENAAATQTQSSVHLSSHASLAPEDDGDYFLGGQSVQWAQGKAGEDRVHVVISEDNGWVFVGIYDGFNGPDAPDYLLANLYAAVLKELKGLIWNDKFDSTATSSSMNSSNSASIEEEDGTTHLKNHQSTENFPAGNKMVNLEAESMRKRERVYNTNYRTSQLMKRADQNPKTWKCEWERERLEFDGKMNNKQLDHHHQIWDESTAINHSEVLNALSQALRKTEEAYLQNADKMVTRNPELALMGSCVLVMLMRGEDVYLMNVGDSRAIVAQQLEPDFGIGKQYRDLERINEGTLRVFESSNGVEFERLTTLASHQLTMDHSTYTEEEVQRIKKAHPNDASAIMNDRVKGYLKITRAFGAGFLKQPKWNDALLEMFRIDYVGNSPYITCDPTLCHYKLSPTDRFLILSSDGLYQYFTNEEAVSQVESFIAAFPEGDPAQHLIEEVLFRAAKKYGMDFHELLDIPQGERRKYHDDVSVIIISFEGRIWHSLM 664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 3077215 3080300 + Cp4.1LG19g03410.1 Cpe19g00351 485759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00351 664 Pfam Protein phosphatase 2C 369 626 IPR001932 -
Cpe19g00351 664 MobiDBLite consensus disorder prediction 275 290 - -
Cpe19g00351 664 Gene3D - 173 660 IPR036457 -
Cpe19g00351 664 CDD PP2Cc 358 655 IPR001932 -
Cpe19g00351 664 PANTHER PHOSPHATASE 2C, PUTATIVE-RELATED 45 662 - -
Cpe19g00351 664 MobiDBLite consensus disorder prediction 275 309 - -
Cpe19g00351 664 ProSiteProfiles PPM-type phosphatase domain profile. 204 655 IPR001932 -
Cpe19g00351 664 MobiDBLite consensus disorder prediction 117 140 - -
Cpe19g00351 664 MobiDBLite consensus disorder prediction 100 142 - -
Cpe19g00351 664 MobiDBLite consensus disorder prediction 175 192 - -
Cpe19g00351 664 SMART PP2C_4 193 653 IPR001932 -
Cpe19g00351 664 SUPERFAMILY PP2C-like 215 656 IPR036457 -
Cpe19g00351 664 MobiDBLite consensus disorder prediction 158 192 - -
Cpe19g00351 664 PANTHER PROTEIN PHOSPHATASE 2C 45 662 IPR015655 GO:0004722|GO:0006470
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00887 Cpe19g00351 CCT
Cpe10g00887 Cpe19g00351 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00188 Cpe-Chr8:1268820 Cpe19g00351 Cpe-Chr19:3077215 1.82E-14 dispersed
Cpe14g00885 Cpe-Chr14:7339290 Cpe19g00351 Cpe-Chr19:3077215 2.39E-35 dispersed
Cpe19g00351 Cpe-Chr19:3077215 Cpe19g00880 Cpe-Chr19:6451702 8.83E-37 dispersed
Cpe10g00887 Cpe-Chr10:4986613 Cpe19g00351 Cpe-Chr19:3077215 8.22E-33 wgd
Cpe16g00609 Cpe-Chr16:6698901 Cpe19g00351 Cpe-Chr19:3077215 2.13E-175 wgd
Cpe19g00351 Cpe-Chr19:3077215 Cpe05g00920 Cpe-Chr5:6041286 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00351 - - bhj:120069881 1090.87