Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00352 ATGGCGATCTCTGGGTTTCGAGCTCTTCTAAGATGGAGCAAATGGTCGAAGAAAGAGTGGGCGATTGCAGTCATCTCTGTCGCTTTCATCGTTTCTGTTTTTTCTTTCCTCTCCGACTCTTGGCATGCTGAAGACGCTGGCATCAACCACACTTTCGATCTCAATCCCGCCAATGACCCTGATTTGGTTGACCTATCTCTGCTACAGAATGCCAAAGCAAAAGGCGCTCTATGTCTTGATGGGAGTTTGCCTGGATACCATTTTCAGAAGGGGTTCGGATCTGGTAATAGGAACTGGGTGCTTCACATTGAGGGTGGAGGTTGGTGCAATTCGGTCTCGTCCTGTTCTTCGCGTAAAATGACCCCGTTAGGTTCGTCAGCCTACATGGATCGCCGTGTTCGTTTCTCTGGAATTTTAAGTAGTGATGCATCCAAAAATCCTGATTTCTATAATTGGAACAAGATCAAGATACGTTACTGTGATGGAGCATCGTTTGCAAGCCATCCTGAGGGTGAAACAAAGAATGGGAAGAGACTTTATTTCAGAGGACAGCTCATCTGGGAAGCGCTTATGGATGAACTCTTATCGGTTGGCTTGTCAAACGCAAGGCAGGCTCTTCTCTCAGGGTGCTCTGCTGGGGGATTGGCTACCCTTATACATTGTGATGACTTCAGAGAGCTTTTGCCGAAGGATGCAACTGTCAAGTGTCTAGCTGATGCTGGATTTTTCCTTGACGAGAAAGATGTTTGGGGAAATCATACTATGAGATCTTTCTATCACGATGTTTTCAACCTTCAGAACACTGCTAAAAGCTTACCCAAGGATTGTACAGCAACAGAGGAGCCATCTAAGTGCCTCTTTCCTCAAGAAATTATCAAACATATCAGCACCCCGTTGTTTCTTGTCAACCCAGCTTATGATTTTTGGCAGATACAAAATGTCTTGGTACCAAATCCATTACATCCTGCTGGCGCTTGGGAGAAATGTAGGCTTAATATTCATAAATGTGATCATGCTCAGCTTGAAATTCTTCAAGGGTTCCGAGACTCTTTGCTGAAGGCACTGAAGGACTTCAAGCACAGCAAGGAAGGAGGGCTTTTCATAAATTCTTGCTTCATCCATTGCCAAACATGGATGTCTGAGACATGGCATTCCCCCAATTCTCCAAGGATAAATAAGAAGACTATAGCAGAGGCCGTTGGTGATTGGTACTTCAAACGAAATTCAGTGAAGTTAATTGACTGCCCTTTTCCATGCAATCCTACCTGTATTCATATGGATTTCAGCTGA 1290 44.57 MAISGFRALLRWSKWSKKEWAIAVISVAFIVSVFSFLSDSWHAEDAGINHTFDLNPANDPDLVDLSLLQNAKAKGALCLDGSLPGYHFQKGFGSGNRNWVLHIEGGGWCNSVSSCSSRKMTPLGSSAYMDRRVRFSGILSSDASKNPDFYNWNKIKIRYCDGASFASHPEGETKNGKRLYFRGQLIWEALMDELLSVGLSNARQALLSGCSAGGLATLIHCDDFRELLPKDATVKCLADAGFFLDEKDVWGNHTMRSFYHDVFNLQNTAKSLPKDCTATEEPSKCLFPQEIIKHISTPLFLVNPAYDFWQIQNVLVPNPLHPAGAWEKCRLNIHKCDHAQLEILQGFRDSLLKALKDFKHSKEGGLFINSCFIHCQTWMSETWHSPNSPRINKKTIAEAVGDWYFKRNSVKLIDCPFPCNPTCIHMDFS 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 3082172 3088850 - Cp4.1LG19g03550.1 Cpe19g00352 485760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00352 429 Pfam Pectinacetylesterase 60 409 IPR004963 GO:0016787
Cpe19g00352 429 PANTHER NOTUM-RELATED 14 424 IPR004963 GO:0016787
Cpe19g00352 429 PANTHER PECTIN ACETYLESTERASE 4 14 424 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00204 Cpe-Chr4:2120869 Cpe19g00352 Cpe-Chr19:3082172 4.13E-150 dispersed
Cpe09g00086 Cpe-Chr9:503678 Cpe19g00352 Cpe-Chr19:3082172 1.31E-136 dispersed
Cpe14g00434 Cpe-Chr14:2728315 Cpe19g00352 Cpe-Chr19:3082172 9.85E-101 dispersed
Cpe19g00352 Cpe-Chr19:3082172 Cpe14g00105 Cpe-Chr14:581138 5.56E-143 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00352 K19882 - csv:101206380 802.357