Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00364 ATGAGAATCATCAATGAGCCAACGGCTGCTGCCATTGCCTATGGTCTTGACAAGAAGGCAACCAGTGTCGGGGAAAAGAACGTTTTGATTTTCGATCTTGGAGGTGGTACTTTTGATGTTTCTCTTCTCACCATTGAAGAGGGTATCTTTGAGGTGAAGGCCACTGCTGGAGATACTCACCTTGGTGGTGAAGATTTCGACAACAGATTGGTCAACCACTTTGTCCAGGAGTTCAAGAGGAAGCACAAGAAGGACATCAGTGGCAACCCAAGGGCTCTCAGAAGGTTGAGAACCTCATGTGAGAGGGCTAAGAGGACTCTCTCATCCACTGCTCAGACCACCATTGAGATTGACTCCTTGTATGAAGGAATCGACTTCTACTCCACCATCACTCGTGCCAGATTCGAGGAATTGAACATGGATCTTTTCAGAAAGTGTATGGAACCCGTCGAGAAGTGTTTGCGGGATGCAAAGATGGACAAGAGCACCGTTCACGATGTTGTTCTTGTCGGTGGATCCACTAGGATTCCCAAGGTCCAACAGTTACTGCAGGATTTCTTCAATGGCAAAGAGCTTTGCAAGAGCATTAACCCCGATGAAGCTGTTGCCTATGGTGCCGCAGTTCAAGCTGCCATCTTGAGCGGTGAAGGCAATGAGAAGGTTCAAGATCTTCTTTTGTTGGATGTTACCCCACTCTCGCTTGGTTTGGAAACCGCCGGTGGTGTCATGACTGTCTTGATTCCAAGAAACACCACAATTCCCACCAAGAAGGAGCAGGTATTCTCTACCTACTCCGACAACCAGCCTGGTGTGTTGATCCAAGTATACGAAGGAGAAAGAACAAGGACCCGCGACAACAACTTGCTTGGAAAATTCGAGCTCTCCGGCATCCCTCCAGCTCCCAGAGGTGTACCTCAAATCACAGTGTGCTTCGATATCGATGCCAACGGTATCTTGAACGTGTCTGCGGAAGATAAGACCACCGGCCAAAAGAACAAGATCACAATCACCAACGACAAGGGAAGACTCTCAAAGGAGGAGATCGAGAAGATGGTTCAAGAGGCAGAGAAGTACAAGTCGGAGGATGAGGAGCACAAGAAGAAGGTAGAAGCCAAAAACGCCTTGGAGAACTACGCATACAACATGAGGAACACAGTGAACGACGAGAAGATCGGCGCCAAGCTATCCCCAGCTGACAAGAAGAAGATCGAAGATGCCATCGAGCAATCCATCCAGTGGCTTGACGCCAACCAGCTGGCTGAGGCCGATGAGTTCGAAGACAAGATGAAGGAGTTGGAGAGCATCTGCAACCCAATCATCGCGAAGATGTACCAAGGCGCTGGAGCCGATATGGGCGGCGCTGGTGACGACAGCATCCCGACCGGCGCTAGCGGAGGTAGCGGTGCTGGTCCCAAGATCGAGGAAGTCGACTAA 1434 49.93 MRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVNDEKIGAKLSPADKKKIEDAIEQSIQWLDANQLAEADEFEDKMKELESICNPIIAKMYQGAGADMGGAGDDSIPTGASGGSGAGPKIEEVD 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 3302661 3304094 - Cp4.1LG19g04470.1 Cpe19g00364 485772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00364 477 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 218 371 IPR029047 -
Cpe19g00364 477 ProSitePatterns Heat shock hsp70 proteins family signature 3. 167 181 IPR018181 -
Cpe19g00364 477 Gene3D - 19 193 - -
Cpe19g00364 477 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 455 - -
Cpe19g00364 477 PANTHER HEAT SHOCK PROTEIN 70KDA 1 455 IPR013126 GO:0005524|GO:0140662
Cpe19g00364 477 SUPERFAMILY Actin-like ATPase domain 25 215 IPR043129 -
Cpe19g00364 477 Gene3D - 372 446 IPR029048 -
Cpe19g00364 477 Gene3D - 1 210 - -
Cpe19g00364 477 MobiDBLite consensus disorder prediction 450 477 - -
Cpe19g00364 477 PRINTS 70kDa heat shock protein signature 164 180 - -
Cpe19g00364 477 PRINTS 70kDa heat shock protein signature 196 216 - -
Cpe19g00364 477 PRINTS 70kDa heat shock protein signature 223 242 - -
Cpe19g00364 477 PRINTS 70kDa heat shock protein signature 304 320 - -
Cpe19g00364 477 PRINTS 70kDa heat shock protein signature 36 46 - -
Cpe19g00364 477 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 370 449 IPR029048 -
Cpe19g00364 477 Coils Coil 348 368 - -
Cpe19g00364 477 Gene3D Actin; Chain A, domain 4 62 145 - -
Cpe19g00364 477 ProSitePatterns Heat shock hsp70 proteins family signature 2. 30 43 IPR018181 -
Cpe19g00364 477 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 219 376 IPR029047 -
Cpe19g00364 477 Pfam Hsp70 protein 1 445 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe13g00849 Cpe-Chr13:7464166 Cpe19g00364 Cpe-Chr19:3302661 0 dispersed
Cpe19g00364 Cpe-Chr19:3302661 Cpe18g00576 Cpe-Chr18:6213170 0 dispersed
Cpe01g02287 Cpe-Chr1:19349625 Cpe19g00364 Cpe-Chr19:3302661 0 wgd
Cpe10g00880 Cpe-Chr10:4955234 Cpe19g00364 Cpe-Chr19:3302661 0 wgd
Cpe13g00846 Cpe-Chr13:7456870 Cpe19g00364 Cpe-Chr19:3302661 1.25E-63 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00364 K03283 - csv:101215599 896.345