Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00367 ATGAGCGTGAACATAACCGCCATTAAAACCGCCTCCAACGGCGTCTGGCAAGGCGACAATCCACTCAATTTCGCCTTCCCTCTCTTGATCCTTCAATCCGTTTTGATTCTCCTCCTCACCCGCCTCCTCGCCGCCGTCCTCAAGCCCCTCCGCCAGCCCAAAGTCATCGCCGAAATCCTCGGCGGGATTCTTCTGGGTCCCTCTGTTTTTGGTCGGAATCAAGCTTATTTGAACTGGGTTTTTCCGGATTGGAGTACTCCGATTCTTGAATCGGTTGCTAGTATTGGGTTGTTGTTCTTTTTGTTTTTGGTTGGATTGGAACTCGATTTGTCCTCTGTTCGCCGTAGTGGGCGGCGGGCTTTTGGAATCGCTGTCGCTGGAATCTCCGTTCCTTTCCTCTCCGGCACCGGCGTTGCCTTTGTACTTCGGAAAACCGTCGCCGGTGCCAATAACGTCGGGTACTGGCAATTTGTTGTGTTCATCGGCGTTGCTCTGTCCATTACTGCTTTCCCTGTTCTGACGCGCATTTTAGCGGAGCTTAAGCTTCTCACCACCGAAGTCGGCGAGATTGCCATGGCGGCCGCCGCATTTAACGACATGGCTGCTTGGATTCTTCTCGCACTCGCCATTGCTCTAACGGGCAACGATAACTCTGTTACAGTACAGAGAAGTTCGTTAGTTTCCGTGTGGGTCCTACTCTCTGGAGCTGGATTTGTCGTTTTCATGATGACGGTGGTCCGACCAGGAATGAAGTGGGTTGCACGGCGGTGTTCGTACGAGGATGACGCGGTGGAGGAAGGGTATGTCTGTTTGACGTTGATCGGAGTGTTGGTTTGTGGGTTTGTGACGGATTTGATCGGAATTCATTCGATTTTTGGGGGTTTTGTGTTTGGATTGACGGTGGCGAAGGAGGGGAGATTCGCGGAGAGATTAATTGAGAGGATTGAGGATTTCGTGTCGGGGCTTCTTCTTCCTCTGTATTTTGCGTCGAGTGGGTTGAAGACGAATGTGACGAAGATCAACGGCGGAAAATCATGGGGGCTGCTGGCGCTGGTTATTTCCACGGCGTGTGCAGGGAAGATTCTGGCGACGTTTGCGGCGGCGATGGCGTTTTTAATGCCGGCGAGGGAGGCGATGGCTTTGGGATTGCTTATGAACACTAAAGGCTTGGTGGAACTCATCGTGCTCAATATTGGGAAGGAGAAAAAGGTTCTGAACGATGAAGTATTCGCGATATTAGTGTTAATGGCACTATTCACAACATTCATCACCACCCCCACCGTGATGGCAGTCTACAAGCCAGCCCGCGCTGCCGCCGCCGCCACCCGAACCCACCGCAAACTCCGCCACCTCTCGGCCGCCGGGAACTCCACCAACGACAAGTCACTAACAATCCTAGCCTGCCTCCACAGCTTAGGCAACGTACCTGCCCTAATCAGCCTGACCGAGTCAACTCGCAGCACCAAAACCTCGTCCCTCAAACTCTTCGTCATGCACCTCGTCGAACTCACCGAGCGTTCCTCCTCAATCCTAATGGCCCAACGCGCCCGCAAGAACGGCTTCCCATTCTTTGCCAGGTTCCGCAAGGCCAGCGAGTGGCACGACCAGATGGCCGCCGCCTTCCAGGCCTACAGCCAGCTGGGCCGGGTCAAGGTCCGGCCCACCACAGCGGTCTCTTCCTTGACCACAATGCACGAGGACATCTGCGGCGTGGCGGACGATAAGAGAGTGGCGATGATCATCTTGCCGTTTCATCGGAATTGGAGGACGGCCAGTGGCGTGGAGGAGAATATGGGCCATGGGTGGAGAGTTGTGAACCAGCGGGTGCTGAAGAGTGCGCCTTGCTCGGTGGCGGTTCTTGTGGACCGGGGGTTAGGAGCGGTGGTTGGTGCGGCACAGAGGATTTGTGTGATGTTTTTCGGTGGTCCTGATGACCGGGAGGCGCTGGAATTGGGTGGACGGATGGCGGAGCATCCGGCGGTGAAGGTCACGGTGGTGAGGTTTCGGGCGTCGCCGCCGTCGGATGGAGTGGAGGGTAGTAAGGTCATTTCGCGACATATGTATTCTAAATCCAGCGACAGTCATTATAGCTTCTCCACTGCTCCAATAAACTGGGAAAAAGAAAAGGAGCTAGATGAAGCAGCAATAGCAGAATTCAGAGCCAAATGGGATGCAACAGCTGAGTACACAGAAAAGGAAGCCACCGACACGAACACGATAGTTGAAGGGGTGGTCGGGATCGGAAAGGAAGGCGGTTTCGACCTAATCGTGGTCGGGAAGGGTCGGGTTCCGTCGAGCATGGTGGCAAAACTAGCAGACCGGGCGGCAGAGCAGTCGGAGTTGGGGCCGATCGGGGACATATTGAGCAGCTCCGGCAGGGGAATAGTATCTTCAATTCTAGTAATTCAACAACACCAAGAAGAAGAAACTCCAGCATTGAATAAGCAGTCTTTCTCAGTCATGGGAGCTTCCATTAATGTATAA 2484 54.11 MSVNITAIKTASNGVWQGDNPLNFAFPLLILQSVLILLLTRLLAAVLKPLRQPKVIAEILGGILLGPSVFGRNQAYLNWVFPDWSTPILESVASIGLLFFLFLVGLELDLSSVRRSGRRAFGIAVAGISVPFLSGTGVAFVLRKTVAGANNVGYWQFVVFIGVALSITAFPVLTRILAELKLLTTEVGEIAMAAAAFNDMAAWILLALAIALTGNDNSVTVQRSSLVSVWVLLSGAGFVVFMMTVVRPGMKWVARRCSYEDDAVEEGYVCLTLIGVLVCGFVTDLIGIHSIFGGFVFGLTVAKEGRFAERLIERIEDFVSGLLLPLYFASSGLKTNVTKINGGKSWGLLALVISTACAGKILATFAAAMAFLMPAREAMALGLLMNTKGLVELIVLNIGKEKKVLNDEVFAILVLMALFTTFITTPTVMAVYKPARAAAAATRTHRKLRHLSAAGNSTNDKSLTILACLHSLGNVPALISLTESTRSTKTSSLKLFVMHLVELTERSSSILMAQRARKNGFPFFARFRKASEWHDQMAAAFQAYSQLGRVKVRPTTAVSSLTTMHEDICGVADDKRVAMIILPFHRNWRTASGVEENMGHGWRVVNQRVLKSAPCSVAVLVDRGLGAVVGAAQRICVMFFGGPDDREALELGGRMAEHPAVKVTVVRFRASPPSDGVEGSKVISRHMYSKSSDSHYSFSTAPINWEKEKELDEAAIAEFRAKWDATAEYTEKEATDTNTIVEGVVGIGKEGGFDLIVVGKGRVPSSMVAKLADRAAEQSELGPIGDILSSSGRGIVSSILVIQQHQEEETPALNKQSFSVMGASINV 827
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 3325303 3329931 + Cp4.1LG19g04500.1 Cpe19g00367 485775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00367 827 Pfam Sodium/hydrogen exchanger family 35 428 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cpe19g00367 827 PANTHER CATION/H + ANTIPORTER 3 811 - -
Cpe19g00367 827 Gene3D - 481 776 - -
Cpe19g00367 827 PANTHER BNAC06G14930D PROTEIN 3 811 - -
Cpe19g00367 827 Gene3D - 28 441 IPR038770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00481 Cpe-Chr14:3033071 Cpe19g00367 Cpe-Chr19:3325303 0 dispersed
Cpe19g00015 Cpe-Chr19:121301 Cpe19g00367 Cpe-Chr19:3325303 1.70E-124 dispersed
Cpe19g00367 Cpe-Chr19:3325303 Cpe01g01007 Cpe-Chr1:5968139 5.48E-107 dispersed
Cpe10g00875 Cpe-Chr10:4931352 Cpe19g00367 Cpe-Chr19:3325303 1.73E-36 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00367 - - csv:101207589 1196.42