Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00374 ATGAATATCCAAGTAAGCCGATGGTGTGCCTCAGCCAAACCTTTCCTGTCTGTGGTGTTCTTGCAGTTTGGGCTTGCAGGAATGGACATTCTGTCTAAAGCAGCTCTCAACCAAGGAATGAGCAACTATGTTCTTGTTGTTTATCGCCATGCAGTTGCCACAATTGTTATAGCTCCTTTTGCATTGATTTTTGACAAGAAGGTCAGACCAAAGATGACAATTCCAGTCTTTGCCAAGCTAATAGTCCTCAGCTTGCTAGAGCCTGTGATTGATCAGAACTTATATTTCTTGGGTATGAAGTACACAACAGCAACTTTTGCAGCTGCCATGTGCAATATTCTTCCTGCCATAACCTTTGTAATGGCTTGGATCCTCAGGCTTGAGAAGGTCAAAATCAAAAGCATCAGAAGCCAAGCGAAGATAGTGGGAACCATAGCAACAGTAGGAGGAGCCATGATAATGACACTGATTAAGGGCCCAATTTTAGAGCTATTTTGGGTAAACGAAAAAGCAGATCATCAACAACAACAAAGAGGTGATATCAGCATTCAACACACAATCAAAGGCTCAATTATGATCACAATTGGCTGTTTCAGCTGGGCCTGCTTCATGATTCTTCAGGCAATCACTTTGAAAGCTTACCCCGCTGAGCTTTCTCTCACGGCTTGGATCTGCCTGTTGGGCACTGCGGAGGGCACTGTATTGGCGCTGGTGATGGAAAGAGGAAATGCCGCCGTTTGGAGCATTACTTGGGGAACTAAATTGCTCGCCGCTGTTTATAGTGGAATATTCTGTTCGGGACTTGCTTATTACATTCAAGGAATAGTGATGAAAGACAAAGGACCTGTCTTTGTGACTGCCTTTAGCCCATTGAGCATGGTCATTGTCGCCATTATGAGTTCGTTCATTCTCGGCGAGCGTCTTTACTTCGGAAGGGTACTTGGAGCTGGTGTGATAATTGTAGGGCTATACCTTGTGGTTTGGGGCAAAAACAAAGATGGAAATGGCTCAAGTGAAGACCTCAAATTGCCCACCAAACAAACCCAAGAAATTGAAGCATCTAATTCAATTGATATAAACAATGACCCAAAATAA 1095 43.56 MNIQVSRWCASAKPFLSVVFLQFGLAGMDILSKAALNQGMSNYVLVVYRHAVATIVIAPFALIFDKKVRPKMTIPVFAKLIVLSLLEPVIDQNLYFLGMKYTTATFAAAMCNILPAITFVMAWILRLEKVKIKSIRSQAKIVGTIATVGGAMIMTLIKGPILELFWVNEKADHQQQQRGDISIQHTIKGSIMITIGCFSWACFMILQAITLKAYPAELSLTAWICLLGTAEGTVLALVMERGNAAVWSITWGTKLLAAVYSGIFCSGLAYYIQGIVMKDKGPVFVTAFSPLSMVIVAIMSSFILGERLYFGRVLGAGVIIVGLYLVVWGKNKDGNGSSEDLKLPTKQTQEIEASNSIDINNDPK 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 3365005 3369073 + Cp4.1LG19g04560.1 Cpe19g00374 485782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00374 364 PANTHER WAT1-RELATED PROTEIN 9 337 - -
Cpe19g00374 364 PANTHER WAT1-RELATED PROTEIN 9 337 IPR030184 GO:0016021|GO:0022857
Cpe19g00374 364 Pfam EamA-like transporter family 23 135 IPR000620 GO:0016020|GO:0016021
Cpe19g00374 364 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020|GO:0016021
Cpe19g00374 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Cpe19g00374 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 332 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe20g00555 Cpe-Chr20:3258930 Cpe19g00374 Cpe-Chr19:3365005 1.31E-52 transposed
Cpe01g00192 Cpe-Chr1:1083179 Cpe19g00374 Cpe-Chr19:3365005 7.70E-91 wgd
Cpe01g01103 Cpe-Chr1:6513013 Cpe19g00374 Cpe-Chr19:3365005 2.34E-123 wgd
Cpe01g02280 Cpe-Chr1:19291497 Cpe19g00374 Cpe-Chr19:3365005 2.34E-78 wgd
Cpe10g00870 Cpe-Chr10:4902433 Cpe19g00374 Cpe-Chr19:3365005 0 wgd
Cpe13g00840 Cpe-Chr13:7414496 Cpe19g00374 Cpe-Chr19:3365005 1.26E-137 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00374 - - csv:101217902 634.795