Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00427 ATGGGAGGAAAGTGCCCTCACAGAAGCGTCAAGAAGCGGAGATACTCGCACAAGACCGCTAGGCGTACGAAATTTCTCATCAATGGCGACGATATGGTTTACGATGCGTTGAAGAAACCTGAGGTGGAGAGGCCTTCTCTACCTGTTGATGAAGACTTGCCTGGAATGGGGCAGTACTACTGCTTGCACTGCGACCGATACTTTGCGAATGTATCTGTGAGGGATGAGCATTTCAAAACCAAGCGTCACAGGAAGCGGGTAAAACTTATGATGGGTCCTGCACCCCACACGCAACTGGACGCCGATTTAGCTGCTGGGATGGGCATGCCTGATAATGGTCCAAAGCTTATGGCAATGTGA 360 50.56 MGGKCPHRSVKKRRYSHKTARRTKFLINGDDMVYDALKKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMMGPAPHTQLDADLAAGMGMPDNGPKLMAM 119
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 3857483 3859306 + Cp4.1LG19g03940.1 Cpe19g00427 485835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00427 119 ProSitePatterns Zinc finger C2H2 type domain signature. 61 83 IPR013087 -
Cpe19g00427 119 PANTHER EXPRESSED PROTEIN 1 119 - -
Cpe19g00427 119 SMART ZnF_U1_5 56 90 IPR003604 GO:0003676|GO:0008270
Cpe19g00427 119 Pfam Zinc-finger double-stranded RNA-binding 58 84 IPR022755 -
Cpe19g00427 119 Gene3D Classic Zinc Finger 45 109 - -
Cpe19g00427 119 SUPERFAMILY beta-beta-alpha zinc fingers 47 110 IPR036236 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00427 K14821 - csv:101222807 240.736