Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe19g00437 | AGCTCTCAAATTACACCCATGCCGATCCGTAACATTGCCATTGGAAGGCCCGAGGAGGCTACCCGACCCGATGCTTTGAAGGCTGGGTTGGCCGAGTTCATTTCTACGTTGATTTTTGTTTTTGCCGGCCAGGGTTCCGGTATAGCCTTTGGTAAGCTTACTGACGGTGGCGCCGCCACCCCCGCCGGCCTTATCTCCGCCTCCATCGCCCATGCTTTCGCTCTTTTTGTCGCTGTCTCTGTCGGCGCCAACATCTCCGGCGGCCACGTCAACCCTGCTGTTACCTTTGGCGCCTTCGTTGGTGGCAACATCACCCTCCTACGTGGCATCATTTACTGGATCGCCCAGCTCCTCGGATCCGTCATCGTGATGACGTTTGGATTGGTGTACACGGTGTACGCGACCGCAGTGGATCCCAAGAAGGGCAGTTTGGGAACAATTGCACCGATCGCCATCGGTTTCATCGTCGGAGCCAACATTTTGGCCGGTGGAGCCTTCACCGGAGCGTCGATGAACCCTGCCGTAGCATTCGGACCGTCGGTGGTGAGCTGGTCATGGGACAACCACTGGGTCTACTGGGCCGGGCCTTTGGTCGGAGGTGGGCTTGCTGGGCTCATCTACGAGTTCATCTTCATTTCCAACACCCACGAGCAGTTGCCAGTCACCGAGTACTGA | 675 | 57.48 | SSQITPMPIRNIAIGRPEEATRPDALKAGLAEFISTLIFVFAGQGSGIAFGKLTDGGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIIYWIAQLLGSVIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILAGGAFTGASMNPAVAFGPSVVSWSWDNHWVYWAGPLVGGGLAGLIYEFIFISNTHEQLPVTEY | 224 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 3899285 | 3900455 | - | Cp4.1LG19g03840.1 | Cpe19g00437 | 485845 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe19g00437 | 224 | Gene3D | Glycerol uptake facilitator protein. | 10 | 121 | IPR023271 | - | |
Cpe19g00437 | 224 | Gene3D | Glycerol uptake facilitator protein. | 122 | 223 | IPR023271 | - | |
Cpe19g00437 | 224 | PANTHER | AQUAPORIN-8 | 7 | 122 | IPR034294 | - | |
Cpe19g00437 | 224 | PANTHER | AQUAPORIN TIP1-1 | 122 | 220 | - | - | |
Cpe19g00437 | 224 | PANTHER | AQUAPORIN-8 | 122 | 220 | IPR034294 | - | |
Cpe19g00437 | 224 | PRINTS | Major intrinsic protein family signature | 27 | 46 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe19g00437 | 224 | PRINTS | Major intrinsic protein family signature | 108 | 127 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe19g00437 | 224 | PRINTS | Major intrinsic protein family signature | 71 | 95 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe19g00437 | 224 | PRINTS | Major intrinsic protein family signature | 190 | 210 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe19g00437 | 224 | CDD | MIP | 27 | 210 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe19g00437 | 224 | SUPERFAMILY | Aquaporin-like | 19 | 218 | IPR023271 | - | |
Cpe19g00437 | 224 | Pfam | Major intrinsic protein | 122 | 207 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe19g00437 | 224 | PANTHER | AQUAPORIN TIP1-1 | 7 | 122 | - | - | |
Cpe19g00437 | 224 | ProSitePatterns | MIP family signature. | 89 | 97 | IPR022357 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe10g00246 | Cpe19g00437 | CCT | |
Cpe03g00205 | Cpe19g00437 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe17g00544 | Cpe-Chr17:4517086 | Cpe19g00437 | Cpe-Chr19:3899285 | 4.25E-84 | dispersed | |
Cpe19g00437 | Cpe-Chr19:3899285 | Cpe20g00187 | Cpe-Chr20:1083503 | 1.34E-88 | dispersed | |
Cpe13g00078 | Cpe-Chr13:604864 | Cpe19g00437 | Cpe-Chr19:3899285 | 1.55E-43 | transposed | |
Cpe10g00246 | Cpe-Chr10:1431950 | Cpe19g00437 | Cpe-Chr19:3899285 | 7.09E-143 | wgd | |
Cpe19g00437 | Cpe-Chr19:3899285 | Cpe03g00205 | Cpe-Chr3:1022954 | 1.07E-110 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe19g00437 | K09873 | - | csv:101204225 | 393.275 |