Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00440 ATGACACTTGAAGTTGAACATCCGAAACTCCTCAACCGCCATCCATGTCTTCCATTCTCTGTTATCCCTCACTCATTTCTCCGTCATTTCCCCTCCATAAACGAATCCCTCTCCGGCGAAGAACCCAATTTCGATTTCTCTCCATTAGATCCTCCATCGACGAGAGGGATCCCCCAACGCCGGCGAAGCTCAACAACTCGACCAACACTTCAAAATCCGGTTCCTGGCCCAGATTGGCTCACTTCTCTGACTCGCTACATTACCCTAGGTCAGGGTGACGACTCCGGCATTCCCATAGCCAGTGCGAAGCTCGATGACGTTTCCGATCTGCTCGGCGGTGCTCTTTTTCTTCCGCTTTTCAAGTGGATGAATGACTATGGACCTATTTACAGGCTCGCCGCTGGGCCTAGGAATTTCGTTGTGGTTAGTGACCCTGCCATTGCTAAGCATGTTCTTAGGAATTATGGGACTTACGCTAAAGGGCTTGTTTCTGAGGTCTCCGAGTTCTTGTTTGGGTCCGGTTTTGCGATTGCTGAAGGCCCGCTTTGGACGGTTCGCCGTAGGGCTGTGGTTCCATCTCTTCACAAGAAGTACTTATCCGTTATTGTTGATCGAGTATTCTGTAAATGTGCCATGAGATTGGTGGAGAAGCTGCAAGAGGATGCATTAAATAATAATTCAGTTAACATGGAGGAAAAGTTTTCTCAACTAACTCTTGATGTTATTGGTCTATCTGTATTCAACTACAGTTTTGATTCTCTCACTACTGACAGCCCTGTGATTGATGCAATTAAGGCTCTGTGTAAAATAATCCCAAGACAGATAAAAGCCGAAGAAGCAGTTACAGTGATTCAAAGAACTGTTGAAGATCTAATTGCCAAGTGCAAAGCAATTGTGGAAATGGAGGGTGAGCGCATCGATGAGGAGGAATATGTGAATGATGCTGATCCAAGTATCCTTCGTTTCCTGCTGGCCAGTAGACAAGAGGTTTCAAGTGTACAATTACGAGATGATCTATTGTCGATGTTGGTTGCTGGACATGAAACTACCGGTTCTGTTCTGACTTGGACATTGTATCTTTTAAGTAAGGCGCAAACTGAAGTTGATAGAGTCTTACAAGGAAGGCCTCCTTCCTACGAAGATACAAAGGAACTTAAATTTTTGACGCGTTGTATCCTTGAGTCAATGCGCCTTTATCCACATCCACCTGTTTTAATAAGAAGAGCTCAAGTTGCTGACGTGCTTCCTGGAAATTACAAGGTTAATGCTGGTCAAGATATCATGATTTCAGTATATAACATCCATCGCTCGTCCCAGGTTTGGGAACAAGCAGAAGAGTTCATACCAGAAAGATTTGACTTGGAGGGTCCTGTGCCCAATGAAAGCAATACAGATTTCAGTGGAGGACCCCGAAAGTGTGTTGGCGATCAATTTGCCTTGCTTGAAGCTATAGTTGCACTTGCCATTTTTCTGCAGCATTTGAACTTCGAGCTGGTTCCAGATCAGACCATTGGGATGACTACTGGAGCAACTATACATACAACAAATGGTTTGTACATGAAACTCAGCCAAAAGCAGATGACCCCAGGATTAGCTTCCCCTGCTTCAAGGTAA 1614 44.92 MTLEVEHPKLLNRHPCLPFSVIPHSFLRHFPSINESLSGEEPNFDFSPLDPPSTRGIPQRRRSSTTRPTLQNPVPGPDWLTSLTRYITLGQGDDSGIPIASAKLDDVSDLLGGALFLPLFKWMNDYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTYAKGLVSEVSEFLFGSGFAIAEGPLWTVRRRAVVPSLHKKYLSVIVDRVFCKCAMRLVEKLQEDALNNNSVNMEEKFSQLTLDVIGLSVFNYSFDSLTTDSPVIDAIKALCKIIPRQIKAEEAVTVIQRTVEDLIAKCKAIVEMEGERIDEEEYVNDADPSILRFLLASRQEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKAQTEVDRVLQGRPPSYEDTKELKFLTRCILESMRLYPHPPVLIRRAQVADVLPGNYKVNAGQDIMISVYNIHRSSQVWEQAEEFIPERFDLEGPVPNESNTDFSGGPRKCVGDQFALLEAIVALAIFLQHLNFELVPDQTIGMTTGATIHTTNGLYMKLSQKQMTPGLASPASR 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 3917919 3924539 - Cp4.1LG19g03680.1 Cpe19g00440 485848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00440 537 PANTHER CAROTENE EPSILON-MONOOXYGENASE, CHLOROPLASTIC 135 524 - -
Cpe19g00440 537 PRINTS E-class P450 group I signature 334 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe19g00440 537 PRINTS E-class P450 group I signature 123 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe19g00440 537 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe19g00440 537 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe19g00440 537 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe19g00440 537 PANTHER CYTOCHROME P450 FAMILY 4 135 524 - -
Cpe19g00440 537 Pfam Cytochrome P450 119 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe19g00440 537 PRINTS P450 superfamily signature 345 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe19g00440 537 PRINTS P450 superfamily signature 473 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe19g00440 537 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe19g00440 537 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe19g00440 537 MobiDBLite consensus disorder prediction 57 74 - -
Cpe19g00440 537 SUPERFAMILY Cytochrome P450 111 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe19g00440 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Cpe19g00440 537 MobiDBLite consensus disorder prediction 41 74 - -
Cpe19g00440 537 Gene3D Cytochrome P450 98 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00631 Cpe-Chr14:4046435 Cpe19g00440 Cpe-Chr19:3917919 9.10E-137 dispersed
Cpe19g00440 Cpe-Chr19:3917919 Cpe07g01083 Cpe-Chr7:9593696 7.70E-30 dispersed
Cpe19g00440 Cpe-Chr19:3917919 Cpe04g01611 Cpe-Chr4:12527159 1.08E-31 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00440 K09837 - csv:101204961 857.825