Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00445 ATGGACAGTAAGAAGCAAGACGAGGATCAGACCGATAGCAGCGATTACACCTCAGAGGACGAAGGAACTGAGGATTACCGGCGAGGAGGCTACCACGCCGTTCGAATTGGCGACACTTTCAAGAATGGTAGATATGTGGTTCAGAGCAAGCTCGGTTGGGGCCATTTCTCCACTGTTTGGCTTGCCTGGGACATCCAATCCTCTCGATATGTGGCTCTCAAAGTACAGAAGAGCGCTCAGCACTATACTGAGGCAGCTATGGATGAGATTACAATCTTGAAACAGATTGCAGACGGAGACGCTGATGATAAGAAATGTGTGGTGAAGCTTTTGGATCATTTCAAGCATTCTGGACCTAATGGGCAGCATGTTTGTATGATTTTTGAGTATTTGGGGGATAATCTATTGACACTAATCAAGTATACTGACTACCGTGGATTACCAATTCATATGGTTAAGGAGATATGTTTTCATATATTGGTTGGTTTGGATTACTTGCATAAACAGCTCTCTATTATACATACTGATTTGAAGCCTGAAAATATTCTGTTACTTTCGATGATTGACCCATCAAAGGATCCCAGAAAATCTGGCACCCCTCTTATTCTTCCAACTAGCAAGGACAAGGCGACATTGGAGTGTGGGATTTCGAAAGACATAAAATTATCAAATGGGGATTTTACTAAACACCACAAGAGAAACATTCGACGAAAGGCGAAGCAAGCTGCTCAGGGATGTGTGGAGAAGGAAATGACTGCGGAGGCTGATGCTAATGCAGAGACATCTCGTACCACTGAATCATCTCCTAACGCGAAATCAAGCACTGGTGCTACAGAGGAAAAATCAACTAGTTCTTTCAGTACAAATCGATCATCTGATGCTGATGGAGCAAAGGGCGGTGGCGAAGAAAATCAAGAAGTTATGGAGGCAATGGAGGATGGAATGAGAAATATAGCCATTAGTTCAGAATCTGAACTAGCTGATGATTCCCAGCAGTCCAAGTCCAAGACCAGCAAAAGCACTTCCTGA 1029 43.63 MDSKKQDEDQTDSSDYTSEDEGTEDYRRGGYHAVRIGDTFKNGRYVVQSKLGWGHFSTVWLAWDIQSSRYVALKVQKSAQHYTEAAMDEITILKQIADGDADDKKCVVKLLDHFKHSGPNGQHVCMIFEYLGDNLLTLIKYTDYRGLPIHMVKEICFHILVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRKSGTPLILPTSKDKATLECGISKDIKLSNGDFTKHHKRNIRRKAKQAAQGCVEKEMTAEADANAETSRTTESSPNAKSSTGATEEKSTSSFSTNRSSDADGAKGGGEENQEVMEAMEDGMRNIAISSESELADDSQQSKSKTSKSTS 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 3960775 3963451 - Cp4.1LG19g03710.1 Cpe19g00445 485853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00445 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Cpe19g00445 342 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524
Cpe19g00445 342 Gene3D Transferase(Phosphotransferase) domain 1 99 192 - -
Cpe19g00445 342 MobiDBLite consensus disorder prediction 257 294 - -
Cpe19g00445 342 Gene3D Phosphorylase Kinase; domain 1 31 130 - -
Cpe19g00445 342 SUPERFAMILY Protein kinase-like (PK-like) 40 185 IPR011009 -
Cpe19g00445 342 MobiDBLite consensus disorder prediction 231 342 - -
Cpe19g00445 342 MobiDBLite consensus disorder prediction 1 25 - -
Cpe19g00445 342 Pfam Protein kinase domain 45 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe19g00445 342 PANTHER SERINE KINASE-LIKE PROTEIN 12 258 - -
Cpe19g00445 342 ProSiteProfiles Protein kinase domain profile. 45 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe19g00445 342 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 258 - -
Cpe19g00445 342 MobiDBLite consensus disorder prediction 323 342 - -
Cpe19g00445 342 CDD STKc_SRPK 34 184 - -
Cpe19g00445 342 SMART serkin_6 45 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00441 Cpe-Chr5:2532740 Cpe19g00445 Cpe-Chr19:3960775 1.71E-144 dispersed
Cpe10g00715 Cpe-Chr10:4092090 Cpe19g00445 Cpe-Chr19:3960775 1.30E-77 dispersed
Cpe19g00445 Cpe-Chr19:3960775 Cpe19g00898 Cpe-Chr19:6543544 1.51E-86 dispersed
Cpe16g00493 Cpe-Chr16:5986824 Cpe19g00445 Cpe-Chr19:3960775 1.13E-139 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63031 PF00069 Pkinase 1.30E-20 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00445 K08832 - csv:101206384 565.459