Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe19g00445 | ATGGACAGTAAGAAGCAAGACGAGGATCAGACCGATAGCAGCGATTACACCTCAGAGGACGAAGGAACTGAGGATTACCGGCGAGGAGGCTACCACGCCGTTCGAATTGGCGACACTTTCAAGAATGGTAGATATGTGGTTCAGAGCAAGCTCGGTTGGGGCCATTTCTCCACTGTTTGGCTTGCCTGGGACATCCAATCCTCTCGATATGTGGCTCTCAAAGTACAGAAGAGCGCTCAGCACTATACTGAGGCAGCTATGGATGAGATTACAATCTTGAAACAGATTGCAGACGGAGACGCTGATGATAAGAAATGTGTGGTGAAGCTTTTGGATCATTTCAAGCATTCTGGACCTAATGGGCAGCATGTTTGTATGATTTTTGAGTATTTGGGGGATAATCTATTGACACTAATCAAGTATACTGACTACCGTGGATTACCAATTCATATGGTTAAGGAGATATGTTTTCATATATTGGTTGGTTTGGATTACTTGCATAAACAGCTCTCTATTATACATACTGATTTGAAGCCTGAAAATATTCTGTTACTTTCGATGATTGACCCATCAAAGGATCCCAGAAAATCTGGCACCCCTCTTATTCTTCCAACTAGCAAGGACAAGGCGACATTGGAGTGTGGGATTTCGAAAGACATAAAATTATCAAATGGGGATTTTACTAAACACCACAAGAGAAACATTCGACGAAAGGCGAAGCAAGCTGCTCAGGGATGTGTGGAGAAGGAAATGACTGCGGAGGCTGATGCTAATGCAGAGACATCTCGTACCACTGAATCATCTCCTAACGCGAAATCAAGCACTGGTGCTACAGAGGAAAAATCAACTAGTTCTTTCAGTACAAATCGATCATCTGATGCTGATGGAGCAAAGGGCGGTGGCGAAGAAAATCAAGAAGTTATGGAGGCAATGGAGGATGGAATGAGAAATATAGCCATTAGTTCAGAATCTGAACTAGCTGATGATTCCCAGCAGTCCAAGTCCAAGACCAGCAAAAGCACTTCCTGA | 1029 | 43.63 | MDSKKQDEDQTDSSDYTSEDEGTEDYRRGGYHAVRIGDTFKNGRYVVQSKLGWGHFSTVWLAWDIQSSRYVALKVQKSAQHYTEAAMDEITILKQIADGDADDKKCVVKLLDHFKHSGPNGQHVCMIFEYLGDNLLTLIKYTDYRGLPIHMVKEICFHILVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRKSGTPLILPTSKDKATLECGISKDIKLSNGDFTKHHKRNIRRKAKQAAQGCVEKEMTAEADANAETSRTTESSPNAKSSTGATEEKSTSSFSTNRSSDADGAKGGGEENQEVMEAMEDGMRNIAISSESELADDSQQSKSKTSKSTS | 342 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 3960775 | 3963451 | - | Cp4.1LG19g03710.1 | Cpe19g00445 | 485853 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe19g00445 | 342 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 172 | 184 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe19g00445 | 342 | ProSitePatterns | Protein kinases ATP-binding region signature. | 51 | 74 | IPR017441 | GO:0005524 | |
Cpe19g00445 | 342 | Gene3D | Transferase(Phosphotransferase) domain 1 | 99 | 192 | - | - | |
Cpe19g00445 | 342 | MobiDBLite | consensus disorder prediction | 257 | 294 | - | - | |
Cpe19g00445 | 342 | Gene3D | Phosphorylase Kinase; domain 1 | 31 | 130 | - | - | |
Cpe19g00445 | 342 | SUPERFAMILY | Protein kinase-like (PK-like) | 40 | 185 | IPR011009 | - | |
Cpe19g00445 | 342 | MobiDBLite | consensus disorder prediction | 231 | 342 | - | - | |
Cpe19g00445 | 342 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Cpe19g00445 | 342 | Pfam | Protein kinase domain | 45 | 185 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe19g00445 | 342 | PANTHER | SERINE KINASE-LIKE PROTEIN | 12 | 258 | - | - | |
Cpe19g00445 | 342 | ProSiteProfiles | Protein kinase domain profile. | 45 | 342 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe19g00445 | 342 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 12 | 258 | - | - | |
Cpe19g00445 | 342 | MobiDBLite | consensus disorder prediction | 323 | 342 | - | - | |
Cpe19g00445 | 342 | CDD | STKc_SRPK | 34 | 184 | - | - | |
Cpe19g00445 | 342 | SMART | serkin_6 | 45 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe05g00441 | Cpe-Chr5:2532740 | Cpe19g00445 | Cpe-Chr19:3960775 | 1.71E-144 | dispersed | |
Cpe10g00715 | Cpe-Chr10:4092090 | Cpe19g00445 | Cpe-Chr19:3960775 | 1.30E-77 | dispersed | |
Cpe19g00445 | Cpe-Chr19:3960775 | Cpe19g00898 | Cpe-Chr19:6543544 | 1.51E-86 | dispersed | |
Cpe16g00493 | Cpe-Chr16:5986824 | Cpe19g00445 | Cpe-Chr19:3960775 | 1.13E-139 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63031 | PF00069 | Pkinase | 1.30E-20 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe19g00445 | K08832 | - | csv:101206384 | 565.459 |