Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00458 ATGGGATCTAATACATGTGAAATTGTTGAAGCAAGGGAAGAAATTAAGGCTGTTCAAAGTAAGGTAGAATCTCGTCATTCGGATTTTGTATCTCACCGAGATCGGAAACTTTCTGCATTGAAAATTGGATTCAAGGGATTTCTAGAGGATGATATCAATCAGCTGTTTGAGTCGATTAGTATAAAAAATGCATCCAAGAGCTTAGGTCATTCACAAGTAGATGTAAATGCGCTGAGAAAAAGTACACTAAAGAAGCCAATAAGTGTTGGCATGCCTCGCTCGCCAGGTATTGGTACTTCTGATTCTGGAAGTTTGAAGCAGGCACTCAGGGAACTATGCCTTTCAAAGGCGTCTGAGATGGCTGCTATGAAAAGATCATCAAAACCAGCTACCTTGTCAAGACTCTCGGAAGCTGGCCGGATCAAGACATTGTACAATTCAGTTATGGTTGAAGCCACTGAGTCGGGCTCTTCTTCAGATAACGGTAAGGGGGGGCGTGTGGTCGAAATATCCCTGGTTCCAGAGGGCAAAAAAAAGAATGTTGAGCAGAGACTTGAGCATGTCCAAGCATCTGCTGTTAAATCACCAGCTGAAAGTTCTCATTCTTCTCCTCAGTTCACGGTTACAAAAACACAAAGTTCTATTGAGGTTGGTACTGTCGAACAAAACGTCAATACCACTCTGTCACGGAAAGTTGGACCTCAAACATTAAAGGCAGAGCTGGAGAAGGAAGAGGAGTCCATTACCCCACCATCTATATCTTCTTGTACGATTAAGAAGGTATTAGATAAGGAGAAGAAGATTCTTGTCTCGAGCAGGGTAGGAAATAAAGTGTCATCATCCAAGGCTGGACGGAAAGGTCGGCTGCAAACTGCTTCTTCATCTAAGTTGGGTAGTGGCAATAAGGTAAGCAAGTTATCTAGAAGTAATTCCCGTTCGATCAAACCAGTTATTCGGAACAAGGGGCTGGTTAAAAAGAAAGTCAAACAGGATTTGAGTTCTCCAACATGTAGTTCAAGCACATACAATGCAGTAAATGGCGATACAGATCCTAGTAAAAAGAAGTTGATATGTGAGAGGTGCCACTGCGCATTGAACAGTGCAGCTAAAGACTCGAAGAAGGGCTCTGCTTCCCAGTTTAGTGCTCTTGGTACTGATGTAAATATGGCTAGTTCAAAATCTGGTGCTAACAAATCAGGCATCACGGATGGCAAGGCTTCTGATGTTCGAGTAAAAAAAAATACAAGGGTACGAGATAAGGGTGAGTTTTCTCAAAGCTCAAAAAGTAGTCAAGGCGAGTACAGTAGCAGTACTACGAGTATTATAAGTGATGACTGCAATGGGCATGGATCGAGTAATGGTAACAGACCTCATATGTCTAAAGATGTAAGGTGGGAAGCCATACGTCACGCACAATTGCAGCATGGGGTTCTCAGCTTGAGGCATTTCAATCTCTTAAAGAAGCTTGGTTGTGGGGACATTGGAACGGTGTATCTTGCCGAGCTAACTGGCACTAATTGCCTATTTGCCATTAAGGTCATGGACAACGAGTTTCTAGCAAGACGGAAGAAAATGCCGAGAGCGCAAACCGAGAGAGAAATACTGAGAATGCTAGATCATCCATTCCTCCCAACACTTTATGTTCAATTTACTTCAGATAATCTATCATGTCTTGTCATGGAATATTGTCCTGGTGGAGATCTTCATGTTCTGCGGCAGAAGCAGCTAGGCCGAGTTTTTCCTGAGCCTGCAGCAAGATTTTATGTTGCTGAGGTCCTCCTTGCCTTGGAGTACTTGCACATGCTTGGAGTTATTTATCGAGATTTAAAACCCGAGAACATTCTTGTCAGGGAAGATGGTCACATAATGCTCACCGACTTCGACCTGTCGCTTAGGTGCACGGTCTGTCCAACACTCCTGAAGTCATCATCCTCCGATTCAGACTCGGCGAAGACATCAGGTCCATGTACAGATTCTAGTTGTGCTGAGCCTTTTTGCATTGAACCATCATGCCAAGTCCCATGCTTCAGCCCAAGGTTCTTACCAGCTGCTTCCAAAACAAGGAAGTCAAAACCCGACCTGACAACTCAGTTCAGGTCATTGCCCCAGCTCGTTGCTGAACCCACCGATGCACGATCGAATTCCTTCGTTGGCACTCACGAGTATTTGGCACCGGAGATCATCAAAGGAGAGGGTCATGGAGCTGCAGTCGATTGGTGGACGTTTGGTGTTTTTCTCTATGAACTTCTATATGGTAGAACCCCTTTCAAGGGATCCAACAACGAAGAGACATTAGCCAATGTAGTATTGCAGAGCCTCAGTTTCCCCGACAGCCCGATTGTTAGTTTCCAAGCAAGGGATCTAATCCGTGGGCTGTTGGTGAAGGAGCCTGAAAGTCGATTCGGGACAGAGAAAGGAGCTGCCGAAATCAAACAGCACCCGTTCTTCGAGGGGCTAAACTGGGCGTTGATCCGTTGTGCAATTCCTCCAGAAGTCCCGGAGGTATGTGACATGGACATTCCAAGCATGATTTCTCAACAAAACAAGTTCAGGTATTTGGAAAGCAAGTCGACTGGAGAGCACTTGGAGTTCGAATTGTTCTAG 2604 44.74 MGSNTCEIVEAREEIKAVQSKVESRHSDFVSHRDRKLSALKIGFKGFLEDDINQLFESISIKNASKSLGHSQVDVNALRKSTLKKPISVGMPRSPGIGTSDSGSLKQALRELCLSKASEMAAMKRSSKPATLSRLSEAGRIKTLYNSVMVEATESGSSSDNGKGGRVVEISLVPEGKKKNVEQRLEHVQASAVKSPAESSHSSPQFTVTKTQSSIEVGTVEQNVNTTLSRKVGPQTLKAELEKEEESITPPSISSCTIKKVLDKEKKILVSSRVGNKVSSSKAGRKGRLQTASSSKLGSGNKVSKLSRSNSRSIKPVIRNKGLVKKKVKQDLSSPTCSSSTYNAVNGDTDPSKKKLICERCHCALNSAAKDSKKGSASQFSALGTDVNMASSKSGANKSGITDGKASDVRVKKNTRVRDKGEFSQSSKSSQGEYSSSTTSIISDDCNGHGSSNGNRPHMSKDVRWEAIRHAQLQHGVLSLRHFNLLKKLGCGDIGTVYLAELTGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRVFPEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCTVCPTLLKSSSSDSDSAKTSGPCTDSSCAEPFCIEPSCQVPCFSPRFLPAASKTRKSKPDLTTQFRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQSLSFPDSPIVSFQARDLIRGLLVKEPESRFGTEKGAAEIKQHPFFEGLNWALIRCAIPPEVPEVCDMDIPSMISQQNKFRYLESKSTGEHLEFELF 867
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 4046135 4050533 - Cp4.1LG19g03570.1 Cpe19g00458 485866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00458 867 MobiDBLite consensus disorder prediction 405 423 - -
Cpe19g00458 867 Gene3D Transferase(Phosphotransferase) domain 1 709 834 - -
Cpe19g00458 867 SMART serkin_6 483 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe19g00458 867 PANTHER FLIPPASE KINASE 1-RELATED 3 867 - -
Cpe19g00458 867 ProSiteProfiles Protein kinase domain profile. 483 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe19g00458 867 Pfam Protein kinase domain 484 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe19g00458 867 Pfam Protein kinase domain 713 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe19g00458 867 MobiDBLite consensus disorder prediction 331 345 - -
Cpe19g00458 867 MobiDBLite consensus disorder prediction 273 345 - -
Cpe19g00458 867 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 867 - -
Cpe19g00458 867 SUPERFAMILY Protein kinase-like (PK-like) 458 835 IPR011009 -
Cpe19g00458 867 CDD STKc_phototropin_like 481 837 - -
Cpe19g00458 867 Gene3D Transferase(Phosphotransferase) domain 1 563 631 - -
Cpe19g00458 867 MobiDBLite consensus disorder prediction 191 210 - -
Cpe19g00458 867 MobiDBLite consensus disorder prediction 193 210 - -
Cpe19g00458 867 MobiDBLite consensus disorder prediction 273 316 - -
Cpe19g00458 867 MobiDBLite consensus disorder prediction 424 439 - -
Cpe19g00458 867 Gene3D Phosphorylase Kinase; domain 1 481 562 - -
Cpe19g00458 867 MobiDBLite consensus disorder prediction 390 439 - -
Cpe19g00458 867 ProSitePatterns Serine/Threonine protein kinases active-site signature. 604 616 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g01239 Cpe-Chr10:9546367 Cpe19g00458 Cpe-Chr19:4046135 0 dispersed
Cpe16g00796 Cpe-Chr16:7783762 Cpe19g00458 Cpe-Chr19:4046135 0 dispersed
Cpe19g00458 Cpe-Chr19:4046135 Cpe20g00678 Cpe-Chr20:4641885 0 dispersed
Cpe10g00271 Cpe-Chr10:1615268 Cpe19g00458 Cpe-Chr19:4046135 0 wgd
Cpe19g00458 Cpe-Chr19:4046135 Cpe05g00421 Cpe-Chr5:2400344 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63032 PF00069 Pkinase 6.90E-36 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00458 - K08286 csv:101210027 1482.23