Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00462 ATGAGGCTGCACGAGCTTCTGTTTGTACTTGTATTACTTTTTTGGCTCGTGGCCTCGTTTATGATCCATGGTTCGAGCCACTACGAAAGAAAGCCTTATATTGTTTATATGGGCGACATGCCCGCGGGAACTTTGTCGACTACGGTGGTAGACGACCATCACAACCTTCTATTGGATACCATTGGAGATGAAAACAAAGCTCGAGAGTCGAAGATCCACAGCTATGGAAGGAGCTTCAATGGATTCGCCGCCAGATTGTTGCCTCACGAAGCCGCCAAGCTCTCAAATATGGAGGGCGTGGTGTCGGTGTTCCCGAGCAGGAAGCACCGAGTCGTGACCACCAGATCGTGGGACTTTCTGGGTCTCAATCGCCGCTCCAAACGGAACCCTAAAATCGAATCTAATATCATTGTCGCCGTTTTGGATACTGGGATTTGGATAAATAGCCCTAGTTTCAGTGATGAAGGCTACGGTCCGCCTCCCGCTAAATGGAAGGGTCGATGCGTCACCGGACCTAATTTCACCGCCTGCAACAACAAAGTGATCGGTGCTAATTACTTCGATCTGGACAATGTAAGCCAATTTACAGAGACGAGTGTGGCCGACACGGAGGGGCATGGCTCTCACACGGCATCGACTGTGGCAGGCTCGGCGGTGGAGGGGGCGAGTTTGTATGGCCTGGGCAAAGGGACTGCACGCGGTGGTGTGCCTTCTGCTCGAATTGCAGTGTACAAAGTGTGCTGGAGTATTTTCTGTAGCGATATGGATGTTCTTGCAGGCTTCGATGAGGCCATTGCTGATGGCGTTGATTTCATTTCCGTCTCCATTGGCTCGGTGGCTGTGGATTTCTTCAGGGACAGCCACGCAATTGGGGCTTTTCATGCTATGAAGAAGGGTATTTTAACGTCCTGCGCCGCCGGCAACGATGGCCCTGAATTGTCCACCGTTGAGAATGTGGCTCCCTGGATTATGACCGTAGCTGCAACCGGCATTGATAGGCGATTTGCCACTGCTTTCAAACTCGGGAATGGCAAGAAATTTACTGGATTCTCCATCAACACTTTCTCGCCCAAGAATCAAATTGCTAGTGCTTGTGACGTAGATGCTCTCAGCCAAAGCAAGGTGAAAGGAAGAATCGTGTATTGCTTGACAACATCCATAGATTACAACATCGAATCCTTAGGAGGCACTGGAATCATTGAACTCCTTGAAGAACAAACCGATTCTTCCCCCATTTTGCTTCTCCCTGGAGCTGTCATTCCTCCAGTCTCTGGCAAATATATCGATCTCTATATCAACTCCACCAAGGATCCTAGAGCTATCATTTACAAGAGCAAGACCGTCAAAATTGCTGCTCCTTTCGTGGCCTCTTTCTTATCCAGAGGCCCTCAGCTCATCAGCCCAAATATCCTCAAGCCTGATCTTGCTGCACCAGGGATAGATATCTTGGCTGCTTATACCAAGTTGTCAAGTTTGACAGGGAAAATTGCAGACAGTAGATATAGCTTGTTCAGTGTAATGGCAGGTACGTCCATGGCTTGTCCTCACGCCACTGCGGCTGCTGCCTACGTTAAGTCGTTCCACCCCGACTGGTCTCCGGCTGCGGTCAAGTCGGCTCTCATGACCACCGCAACGCCAATGAAGATCAAGTCGGAGGATGCTGAGTTTGGCTCTGGAGCTGGACAAATAAACCCAACCAAGGCTGTTCATCCTGGCCTTGTTTACGACATTTCGCTCGGCTCCTACATATCTTTCCTCTGCAAAGAAGGCTACAACAGTACAACAATTGGCCTACTTGTTGGTAGCAAGGAGTATAATTGCTCCAAGATCAAGCCTGCTAAAGGCACTGACGGGCTCAACTACCCTACAATGCACAAACAGCTCTCAGATCCTGGTTCTGCCATTACAGCGGTGTTTTATCGGACCGTGACTGATGTCGAGCACGGTGCGTCGGTGTACAGGGCGAATATATCATCCCCAGTTGGTCTCTCTGTCAAAGTTTTTCCAGACAGTCTAGATTTTGCGAAGGCAGGAGAAAGGAAGAGATTCAAAGTTGTGGTGAAGGGCGAAGCTATGAGAGATGGAACTCGGATTCTATCAGCTTTACTTGAATGGAAGGACTCTAAACACGTAGTTAGAAGCAATATCCTTATATCCAGACAGTCTAGATTAACGTAA 2178 49.04 MRLHELLFVLVLLFWLVASFMIHGSSHYERKPYIVYMGDMPAGTLSTTVVDDHHNLLLDTIGDENKARESKIHSYGRSFNGFAARLLPHEAAKLSNMEGVVSVFPSRKHRVVTTRSWDFLGLNRRSKRNPKIESNIIVAVLDTGIWINSPSFSDEGYGPPPAKWKGRCVTGPNFTACNNKVIGANYFDLDNVSQFTETSVADTEGHGSHTASTVAGSAVEGASLYGLGKGTARGGVPSARIAVYKVCWSIFCSDMDVLAGFDEAIADGVDFISVSIGSVAVDFFRDSHAIGAFHAMKKGILTSCAAGNDGPELSTVENVAPWIMTVAATGIDRRFATAFKLGNGKKFTGFSINTFSPKNQIASACDVDALSQSKVKGRIVYCLTTSIDYNIESLGGTGIIELLEEQTDSSPILLLPGAVIPPVSGKYIDLYINSTKDPRAIIYKSKTVKIAAPFVASFLSRGPQLISPNILKPDLAAPGIDILAAYTKLSSLTGKIADSRYSLFSVMAGTSMACPHATAAAAYVKSFHPDWSPAAVKSALMTTATPMKIKSEDAEFGSGAGQINPTKAVHPGLVYDISLGSYISFLCKEGYNSTTIGLLVGSKEYNCSKIKPAKGTDGLNYPTMHKQLSDPGSAITAVFYRTVTDVEHGASVYRANISSPVGLSVKVFPDSLDFAKAGERKRFKVVVKGEAMRDGTRILSALLEWKDSKHVVRSNILISRQSRLT 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 4088058 4092111 - Cp4.1LG19g04950.1 Cpe19g00462 485870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00462 725 Pfam Subtilase family 134 559 IPR000209 GO:0006508|GO:0008236
Cpe19g00462 725 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 719 IPR045051 -
Cpe19g00462 725 PANTHER CUCUMISIN PROTEIN 22 719 - -
Cpe19g00462 725 Gene3D - 586 721 - -
Cpe19g00462 725 PRINTS Subtilisin serine protease family (S8) signature 202 215 IPR015500 -
Cpe19g00462 725 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Cpe19g00462 725 PRINTS Subtilisin serine protease family (S8) signature 508 524 IPR015500 -
Cpe19g00462 725 CDD PA_subtilisin_like 339 442 - -
Cpe19g00462 725 Gene3D Peptidase S8/S53 domain 135 582 IPR036852 GO:0004252|GO:0006508
Cpe19g00462 725 Pfam Fibronectin type-III domain 619 718 IPR041469 -
Cpe19g00462 725 ProSiteProfiles Serine proteases, subtilase domain profile. 116 569 - -
Cpe19g00462 725 SUPERFAMILY Subtilisin-like 130 569 IPR036852 GO:0004252|GO:0006508
Cpe19g00462 725 ProSitePatterns Serine proteases, subtilase family, serine active site. 509 519 IPR023828 -
Cpe19g00462 725 Pfam Peptidase inhibitor I9 33 108 IPR010259 -
Cpe19g00462 725 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 138 148 IPR023827 -
Cpe19g00462 725 Gene3D - 332 448 - -
Cpe19g00462 725 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 111 IPR037045 -
Cpe19g00462 725 CDD Peptidases_S8_3 113 545 IPR034197 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g01027 Cpe-Chr8:7881737 Cpe19g00462 Cpe-Chr19:4088058 0 dispersed
Cpe19g00462 Cpe-Chr19:4088058 Cpe01g01071 Cpe-Chr1:6304861 1.33E-121 dispersed
Cpe19g00460 Cpe-Chr19:4067507 Cpe19g00462 Cpe-Chr19:4088058 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00462 - - csv:101207592 1148.27