Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00500 ATGGGGGCTCAAAAGGCGATGAAAGTTCTGAGCGAGAGAGCCGCACTTGTCCGAGAGTCGCTGCAGAAGAGTCAGGTTGTAACGGGGAGCATGGTCTCCATTCTTGGCTCCTTTGATCACCGTCTCTCCGCTCTCGAAACAGCTATGCGGCCTACTCAGATCAGAACTCATTCAATTCGGAGGGCGCATGAGAATATCGACAAGACATTGAAGTATGCAGAAAGTATGCTAGCTCAGTTTGATCTTACACGCAAGGCCGAGGCTAAAATACTCAGGGGGCCACATGAGGACTTGGAAATGTACTTGGAAGCAATTAGTCAACTTCGAAGCGCTAATCGCTACTTTACTGGGAACAAAATTTTCCGAAGTAACGAAGCTATTCTTACCCATACAAGCAACTTGCTTGCTAAAGCCATTTCAAAGCTGGAAGATGAGTTCAGACAGCTTTTAACAAATTACAGTAAGCCAGTGGAACCCGATCGTCTTTTCGATTGCCTCCCCAACTCCTTGCGTCCATCTTCAGCATCTTCGCAGCAAGGTGATGGTGGTAGCAAACATAATTCTGACAATCACAACAAAAGCTTAGAAGCTTCCATCTTCGTTCCCCCAACTCTTATTCCTCCCAGGGTTCTTCCATTGTTGCATGATTTGGCCCAACAAATGATTCTGGCTGGCCATCAGCAGCAAGTCTATAGAATATACAGGGAGACTCGCGCTGCAGTTTTAGAACAGAGTCTTAGGAAATTAGGTGTTGAGAGGCTTAGCAAGGACGATGTCCAGAAAATGCAGTGGGAGGCCCTTGAAGCTAAGATTGGGAACTGGATACATTACGTGCGCATTGCTGTCAAACTGCTGTTTACTGGGGAAAGGAAAATCTGTGATCAAATATTTGATAGTGCAGACGCTCTCGTGGATCAATGCTTCGCAGATGTGACATCAAACAATGTGTCAATGCTACTAAGTTTTGGAGACGCAATTGCCAAAAGCAAGAGATCTCCAGAAAAATTGTTTGTTCTTCTAGACATGTTTGAAATAATGCGAGAACTGCAATCTGAGATTGAAACACTTTTTGGAAGTAAAGCATGCATTGAAATGCGTGATTCTGCATTGAGCTTAACACAACGCCTTGCCGAGACAGCTCAAGAGACTTTTGTTGATTTTGAAGAAGCAGTAGAAAAGGATGCCACAAAAACTGCTGTTCTTGATGGGACTGTTCATCCCTTGACCAGTTATGTGATAAACTACGTGAAGTTTTTATTTGACTACAAATCTACTTTGAAGCAACTATTCCAAGACTTCGAGGCTGTTGATCCAGATGCTCAGTTAGCAGTGATAACTACAAGAATTACGCAGGCACTTCAGACTAATCTTGACGGAAAATCTAAGCAATACAAGGATCCTGCATTAACTCAATTATTTCTGATGAACAATATTCACTATATAGTGAGATCTGTCCGTAGATCGGAGGCAAAGGATTTGTTGGGTGATGACTGGGTGCAGATACATCGAAGGATTGTGCAGCAGCATGCAAATCAATACAAAAGGATTTCTTGGGCCAAGATTTTGCAGTGCCTCACCGTTCAGGCCTCAGGCAGTGGTGGTGCTTCGGCAGATGCAACCTGTGGACTCTCAAAAGCTATGGTGAAAGATAGGTTTAAGACTTTCAATATCCAATTTGAGGAGCTTCATCAGCGGCAGTCTCAATGGACAGTTCCTGACAGTGAGTTGCGGGAGTCATTGAGGCCTATGGTTGACAATGGGAAAACTGGTCTTCAAAGAAGCATCAAATATACACCTGAGGATCTTGAGCGTATGCTAAATGAATTCTTTGAGGGCAAGACATTCGGTGAACAAAAGCGCTAG 1863 43.96 MGAQKAMKVLSERAALVRESLQKSQVVTGSMVSILGSFDHRLSALETAMRPTQIRTHSIRRAHENIDKTLKYAESMLAQFDLTRKAEAKILRGPHEDLEMYLEAISQLRSANRYFTGNKIFRSNEAILTHTSNLLAKAISKLEDEFRQLLTNYSKPVEPDRLFDCLPNSLRPSSASSQQGDGGSKHNSDNHNKSLEASIFVPPTLIPPRVLPLLHDLAQQMILAGHQQQVYRIYRETRAAVLEQSLRKLGVERLSKDDVQKMQWEALEAKIGNWIHYVRIAVKLLFTGERKICDQIFDSADALVDQCFADVTSNNVSMLLSFGDAIAKSKRSPEKLFVLLDMFEIMRELQSEIETLFGSKACIEMRDSALSLTQRLAETAQETFVDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYKSTLKQLFQDFEAVDPDAQLAVITTRITQALQTNLDGKSKQYKDPALTQLFLMNNIHYIVRSVRRSEAKDLLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVQASGSGGASADATCGLSKAMVKDRFKTFNIQFEELHQRQSQWTVPDSELRESLRPMVDNGKTGLQRSIKYTPEDLERMLNEFFEGKTFGEQKR 620
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 4278763 4288344 - Cp4.1LG19g04760.1 Cpe19g00500 485908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00500 620 Pfam Exo70 exocyst complex subunit 273 607 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cpe19g00500 620 SUPERFAMILY Cullin repeat-like 76 611 IPR016159 -
Cpe19g00500 620 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 617 IPR004140 GO:0000145|GO:0006887
Cpe19g00500 620 MobiDBLite consensus disorder prediction 169 185 - -
Cpe19g00500 620 MobiDBLite consensus disorder prediction 168 192 - -
Cpe19g00500 620 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 36 617 - -
Cpe19g00500 620 Gene3D Exocyst complex component Exo70 75 620 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00315 Cpe19g00500 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe19g00500 Cpe-Chr19:4278763 Cpe03g01013 Cpe-Chr3:8277352 6.54E-98 dispersed
Cpe10g00315 Cpe-Chr10:1826990 Cpe19g00500 Cpe-Chr19:4278763 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00500 K07195 - csv:105436019 1064.29