Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe19g00504 | ATGAACAACGGCACCGACGACGGCGGCGGATTTCTGTCCTCAGGCAACATCGGCGGAGACGGATATGGAATCGGCGTCTCGTTAGGGCTTTTGATTCTCATCACTACAATCCTCTTGGCTTCCTATTACTGCACCAGAGTCGCCCAATCACCGACCTCCGGGATTCAGAGCAACGCCAATCTCTCGCCGCCGCCGCCGCCTCGGCTGGCGGAGGAGGATGCCGTTGTTGTCGTCGATATCGGAATCGATCAGGAGACGATTAGGAATTTTCCGAAATTGCTGTATTCAGAGGCGAAGATTCAGAACAACGATTCCTCTGCTTCTTGTTGCTCTATCTGTTTGGCCGATTACAAAAACTCCGATGTTCTTCGGATTTTGCCTGATTGCGGTCATTTGTTCCATCTCAAGTGCGTCGATCCGTGGCTGAGGCTTCACCCAACCTGTCCGTTTTGCCGGACCTCGCCTATTCCGACGCCGTTATCGACTCCTCTGGCGGAGCAAGTTCCATTGGCGAGATGGCACGGTTGA | 528 | 53.79 | MNNGTDDGGGFLSSGNIGGDGYGIGVSLGLLILITTILLASYYCTRVAQSPTSGIQSNANLSPPPPPRLAEEDAVVVVDIGIDQETIRNFPKLLYSEAKIQNNDSSASCCSICLADYKNSDVLRILPDCGHLFHLKCVDPWLRLHPTCPFCRTSPIPTPLSTPLAEQVPLARWHG | 175 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 4306471 | 4306998 | + | Cp4.1LG19g04800.1 | Cpe19g00504 | 485912 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe19g00504 | 175 | PANTHER | RING-H2 FINGER PROTEIN ATL70-LIKE | 5 | 171 | - | - | |
Cpe19g00504 | 175 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 5 | 171 | IPR045899 | - | |
Cpe19g00504 | 175 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 71 | 156 | IPR013083 | - | |
Cpe19g00504 | 175 | SMART | ring_2 | 110 | 151 | IPR001841 | - | |
Cpe19g00504 | 175 | Pfam | Ring finger domain | 110 | 152 | IPR001841 | - | |
Cpe19g00504 | 175 | SUPERFAMILY | RING/U-box | 86 | 157 | - | - | |
Cpe19g00504 | 175 | CDD | RING-H2_PA-TM-RING | 109 | 152 | - | - | |
Cpe19g00504 | 175 | ProSiteProfiles | Zinc finger RING-type profile. | 110 | 152 | IPR001841 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe19g00504 | Cpe-Chr19:4306471 | Cpe01g00619 | Cpe-Chr1:3570770 | 1.74E-19 | dispersed | |
Cpe10g00317 | Cpe-Chr10:1843894 | Cpe19g00504 | Cpe-Chr19:4306471 | 3.97E-87 | wgd | |
Cpe19g00504 | Cpe-Chr19:4306471 | Cpe03g00321 | Cpe-Chr3:1681697 | 2.11E-55 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe19g00504 | - | - | cpep:111782200 | 313.153 |