Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00510 ATGACTACTAAACTTATCAATGGAACAAGCCTTCAGCTGTTAAGGCGTTACGATAACAGACCAGAGAGTTACAGGGCACAGTTGTTGGATGATGATGGTCCAGCTTATGTTCGTGTATTTGTTAGCATTTTACGAGATATATTTAAGGAAGAAACAGTGGAATATGTTTTAGCATTAATCGATGAGATGCTTACAGCAAACCCAAAAAGAGCAAGATTGTTCCATGATGATTCTCTTTCTAGTGAAGATACTTATGAACCTTTCCTAAGATTGCTTTGGAAGGGCAATTGGTTCATACAGGAGAAGAGCTGTAATATACTTGCTCTGATAGTGAGTGCTAGAAAAAAAACACATGATGGCAGTTATGCAAATGGTGATGCCTCGAACTCCAAGAGGAAAATTACTACCATTGATGATGTTTTGGATGGACTGGTGAAATGGCTTTGTGCACAGCTGAAGAATCCTTCACATCCCAGTCGTGCTGTACAGACTTCTATCAATTGCCTTGCAACTCTGCTGAAGGAACCAAAAGTCAAATCCTCCTTTGTCCAAGCAGATGGAGTGAAGCTGCTCATCCCTTTGATTTCTCCTGCGTCGACTCAACAATCTATTCAGATTCTATATAAAACATGTTTTTGTGTTTGGCTTTTATCATATTATGAGCCGGCTATTGAATTCTTGGCCACTTCCAGAACCCTTCCAAGACTTATCGATGTCGTCAAGAGTTCCACAAAAGAGAAGGTTGTCCGAGTCGTTATTTTGACCTTAAAGAACTTACTTCACAAGGGGACATTTGGAGCTCAAATGGTGGGTCTCGGACTACCACAAGTTGTTCAAAGTTTGAAATCCCAAGCATGGAGTGATGAGGACCTTTTGGATGCTTTGAATCAACTAGAAGAAGGGCTGAAAGATAACATCAAGAAACTAAGTTCTTTTGACAAGTATAAGCAAGAAGTCCTTCTAGGCCATCTTGACTGGTCTCCTATGCACAAAGATGTAAATTTCTGGCGCGAAAATATCACAAGCTTCGAAGAGAACGACTTCAAGCTATTGAGGGTCCTTATCACCATTCTGGATTCGTCGAGTGATCCAAGGGCTCTAGCAGTCGCTTGTTTTGATCTTTCCCAGTTCATTCAGCACCATCCTGCTGGGAGAGTTATAGTGACAGACTTGAAGGCGAAGGAAAGAGTGATGAAACTGATGAATCATGAGAATGCTGAAGTTACCAAATATTCCCTCCTCTGTATTCAAAGGCTGTTCCTAGGTGCCAAGTATGCCAGCTTTCTGCAGGCTTAA 1296 41.28 MTTKLINGTSLQLLRRYDNRPESYRAQLLDDDGPAYVRVFVSILRDIFKEETVEYVLALIDEMLTANPKRARLFHDDSLSSEDTYEPFLRLLWKGNWFIQEKSCNILALIVSARKKTHDGSYANGDASNSKRKITTIDDVLDGLVKWLCAQLKNPSHPSRAVQTSINCLATLLKEPKVKSSFVQADGVKLLIPLISPASTQQSIQILYKTCFCVWLLSYYEPAIEFLATSRTLPRLIDVVKSSTKEKVVRVVILTLKNLLHKGTFGAQMVGLGLPQVVQSLKSQAWSDEDLLDALNQLEEGLKDNIKKLSSFDKYKQEVLLGHLDWSPMHKDVNFWRENITSFEENDFKLLRVLITILDSSSDPRALAVACFDLSQFIQHHPAGRVIVTDLKAKERVMKLMNHENAEVTKYSLLCIQRLFLGAKYASFLQA 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 4350074 4358447 - Cp4.1LG19g04750.1 Cpe19g00510 485918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00510 431 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 431 IPR004908 GO:0000221|GO:0046961|GO:1902600
Cpe19g00510 431 Pfam V-ATPase subunit H 308 420 IPR011987 GO:0000221|GO:1902600
Cpe19g00510 431 Pfam V-ATPase subunit H 2 302 IPR004908 GO:0000221|GO:0046961|GO:1902600
Cpe19g00510 431 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 431 - -
Cpe19g00510 431 SUPERFAMILY ARM repeat 2 421 IPR016024 -
Cpe19g00510 431 PIRSF V-ATP_synth_H 1 430 IPR004908 GO:0000221|GO:0046961|GO:1902600
Cpe19g00510 431 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 377 384 IPR018506 GO:0020037
Cpe19g00510 431 Gene3D - 322 423 IPR038497 -
Cpe19g00510 431 Gene3D - 1 310 IPR011989 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00441 Cpe-Chr3:2503213 Cpe19g00510 Cpe-Chr19:4350074 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00510 K02144 - csv:101217015 815.068