Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00524 ATGGCGACCATGAATTCCAGCGTCTTGGCCTGCAACTACGCCATTTCAGGTGCTGGATCCGCCGAGCTTAACTCGAAACTCAGCGCCGTGACTTCTGTTGCGTCGCCTGGGGTTTCTGGTTACAAGTTGCCTGCGATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCTAAGAATGAAGGAAGGAGAACTGCGCTTCTTTTCCTTGGAGCTTCCCTCTTTGCTGCGGCTGCTGCTTCCTCCAACTCTTCGGCTAATGCTGGAGTCATTGAAGAGTACCTTGAGAAGAGTAAAGCTAACAAGGAACTGAATGACAAGAAAAGATTAGCAACAAGTGGAGCAAACTTTGCAAGGGCATACACTGTTCAGTTTGGATCATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCAAAACAAAAGAAAGTCCCATTTATCTCTGATGATTTGGAATTGGAGTGTGAGGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA 516 47.87 MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAASSNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 171
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
19 4454144 4458860 + Cp4.1LG19g12170.1 Cpe19g00524 485932
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00524 171 Gene3D - 87 171 IPR044907 -
Cpe19g00524 171 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 171 IPR008796 GO:0009522|GO:0015979
Cpe19g00524 171 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 44 171 IPR008796 GO:0009522|GO:0015979
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00333 Cpe-Chr10:1941409 Cpe19g00524 Cpe-Chr19:4454144 6.42E-107 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00524 K02701 - csv:101204396 293.893