Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00525 ATGCCTGCTTGGTGGGCAAGAAAATTCAGTAAAAACAAAGAGCATCACAATCCCCCCACTAATTTTCTCAACTTCTCTAAATCTTCTACTTCTTCCCCTAAATCTGAGCCTAAGAAGGGGGCAGACACCCCCAGGAGCTTCGATGACCTCTCTTCTCTGATTTTCTCTCGTAATTCCCCCAGGCCTTCCAGGGATCTGGCCTCTTCTGGGGTTGCTGATGGCGGCGGCGGCTCTTCTGGGTTCTCTGGTTTTGACTCCGATAGTGGGGATAAGAGTCACCCTCTTCCGAGACCTGCTACTCCCCCCGCTTTTGGGATTGATCATGGAGTCGGGATTGGATCTGGGTCTGTTTCGGTTTCCAGTGTTAGCTCTTCTGGGTCTTCGGATGATCATCCATCGAATCAAGAACAGCTTCAGTTTGGAGCTTACAGGTTTTTGGCTGGAGATGACTTATCGTTTAGATCCTGTTGTGAACTTAGGATTTTATTGATTGATACTTCCATTTTCAAATCTACTCGTGACTGCTTCATAAGAGGATTTGCTGATACCAGAATAGAGGCAAGGCCAAGAAGTCCCGGTCCAGGATCGAGAGGACCCACGAGTCCCACATCGCCTCTAAACTCACGGTTCTGTGGCATGAGTCTTGAGTCTCCGACCGGCAAGCTAGATGATGGGAAGAGTCGATGTCATAAGCTGCCGCTTCCTCCAAGCTCTCCCACCAGCCCTTCTTCGTTGACCAGCACGAAAGCTGTCAATATCGGTGATAACGACCCGGCTACCCAATCGAAGTGGAAGAGAGGAAGGCTTCTAGGAAGGGGAACATTTGGGCATGTTTACCTTGGATTTAACAGTGTAAGTGGCCAAATGTGTGCAATTAAGGAGGTCAAGGTTATTAGCGATGACTCGACATCGAAGGAATGTCTCAAGCAATTGAATCAGGAGATAACCGTGCTCAGTCAGCTGTCGCATCCGAACATCGTCCGGTACTATGGTAGTGAAATGGGTGACGAATCGCTCTCCGTCTATTTAGAATACATCTCCGGTGGCTCAATCCACAAATTACTACAAGAATATGGCGCCTTCAAAGAACCTGTTATAAGAAATTATACCCGAAAGATTCTTTCTGGGCTTGCGTATCTGCACGGGAGAAATACAGTGCATAGGGACATCAAAGGGGCTAATATCTTAGTGGATCCAAATGGTGAGGTCAAGTTGGTCGACTTCGGCATGGCAAAACATATGACGAATTGTACTTCGATGCTTTCGTTCAAAGGCAGTCCTTATTGGATGGCCCCTGAGGTTGTGATGCATACAAATGGTTATAGTCTTGCTGTAGATATTTGGAGTTTAGGGTGTACGGTTCTCGAAATGGCAACGTCTAAGCCACCTTGGAGCAAATACGAAGGGGTGGCTGCCATATTCAAAATTGGAAATAGCAAAGATATGCCTGAAATCCCAGACCATCTCTCCTATGATGCTAAAAACTTTGTGCAGCTATGTTTACAACGCGATCCATCGGCACGTCCTTCCGCTGCAGAACTGCTGGATCACCCTTTTGTTCAAGATGCAGTAACACCAAGAGCATCTGATGTCAACTTTTCCGTGGATGCATTTCCCTTTAGCTTCGACGGATTCCAGACTCCGCCATTGTTAGATCAGCATCCAAACAGAAAAAGTATAAGCATATGTGATGGAGACTACGTGACAAACCCGACAACCTCGTCGAGAGCTTTGAGGAGTCCTCCTAGGGGAAATGCACGAATGATCACGTCCTTGCCTGTCTCTCCGTCTTCGAGTCCGTTACGGTCGTATGGCCCGCTACACCAGAGCTGTTATCGTTCACCACCTCACACATCTTACATGGGGTTGGGTCAAAGCTGTTACAATTTAAACGAATACGCATATAACACGAGACCAAACACATTGTTCACTCTCGACCCATCACGAGATTCATCGCTATTGAAAGTGCAGACTCATGGTGGATCACCAAGAAGACCTCTTTGA 2004 47.21 MPAWWARKFSKNKEHHNPPTNFLNFSKSSTSSPKSEPKKGADTPRSFDDLSSLIFSRNSPRPSRDLASSGVADGGGGSSGFSGFDSDSGDKSHPLPRPATPPAFGIDHGVGIGSGSVSVSSVSSSGSSDDHPSNQEQLQFGAYRFLAGDDLSFRSCCELRILLIDTSIFKSTRDCFIRGFADTRIEARPRSPGPGSRGPTSPTSPLNSRFCGMSLESPTGKLDDGKSRCHKLPLPPSSPTSPSSLTSTKAVNIGDNDPATQSKWKRGRLLGRGTFGHVYLGFNSVSGQMCAIKEVKVISDDSTSKECLKQLNQEITVLSQLSHPNIVRYYGSEMGDESLSVYLEYISGGSIHKLLQEYGAFKEPVIRNYTRKILSGLAYLHGRNTVHRDIKGANILVDPNGEVKLVDFGMAKHMTNCTSMLSFKGSPYWMAPEVVMHTNGYSLAVDIWSLGCTVLEMATSKPPWSKYEGVAAIFKIGNSKDMPEIPDHLSYDAKNFVQLCLQRDPSARPSAAELLDHPFVQDAVTPRASDVNFSVDAFPFSFDGFQTPPLLDQHPNRKSISICDGDYVTNPTTSSRALRSPPRGNARMITSLPVSPSSSPLRSYGPLHQSCYRSPPHTSYMGLGQSCYNLNEYAYNTRPNTLFTLDPSRDSSLLKVQTHGGSPRRPL 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 4459172 4463954 - Cp4.1LG19g12030.1 Cpe19g00525 485933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00525 667 MobiDBLite consensus disorder prediction 49 65 - -
Cpe19g00525 667 MobiDBLite consensus disorder prediction 1 135 - -
Cpe19g00525 667 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 644 - -
Cpe19g00525 667 SUPERFAMILY Protein kinase-like (PK-like) 262 601 IPR011009 -
Cpe19g00525 667 MobiDBLite consensus disorder prediction 186 258 - -
Cpe19g00525 667 MobiDBLite consensus disorder prediction 114 135 - -
Cpe19g00525 667 SMART serkin_6 264 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe19g00525 667 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 3 1 644 - -
Cpe19g00525 667 CDD STKc_MEKK1_plant 263 520 - -
Cpe19g00525 667 Pfam Protein kinase domain 265 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe19g00525 667 ProSiteProfiles Protein kinase domain profile. 264 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe19g00525 667 MobiDBLite consensus disorder prediction 241 258 - -
Cpe19g00525 667 MobiDBLite consensus disorder prediction 200 214 - -
Cpe19g00525 667 MobiDBLite consensus disorder prediction 16 37 - -
Cpe19g00525 667 Gene3D Transferase(Phosphotransferase) domain 1 260 536 - -
Cpe19g00525 667 ProSitePatterns Protein kinases ATP-binding region signature. 270 293 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00335 Cpe19g00525 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00936 Cpe-Chr11:7917148 Cpe19g00525 Cpe-Chr19:4459172 7.56E-90 dispersed
Cpe14g00100 Cpe-Chr14:541122 Cpe19g00525 Cpe-Chr19:4459172 1.03E-131 dispersed
Cpe19g00525 Cpe-Chr19:4459172 Cpe19g00606 Cpe-Chr19:4987930 4.47E-113 dispersed
Cpe10g00335 Cpe-Chr10:1945120 Cpe19g00525 Cpe-Chr19:4459172 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63033 PF00069 Pkinase 7.20E-73 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00525 K04421 - csv:101203907 939.102