Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe19g00525 | ATGCCTGCTTGGTGGGCAAGAAAATTCAGTAAAAACAAAGAGCATCACAATCCCCCCACTAATTTTCTCAACTTCTCTAAATCTTCTACTTCTTCCCCTAAATCTGAGCCTAAGAAGGGGGCAGACACCCCCAGGAGCTTCGATGACCTCTCTTCTCTGATTTTCTCTCGTAATTCCCCCAGGCCTTCCAGGGATCTGGCCTCTTCTGGGGTTGCTGATGGCGGCGGCGGCTCTTCTGGGTTCTCTGGTTTTGACTCCGATAGTGGGGATAAGAGTCACCCTCTTCCGAGACCTGCTACTCCCCCCGCTTTTGGGATTGATCATGGAGTCGGGATTGGATCTGGGTCTGTTTCGGTTTCCAGTGTTAGCTCTTCTGGGTCTTCGGATGATCATCCATCGAATCAAGAACAGCTTCAGTTTGGAGCTTACAGGTTTTTGGCTGGAGATGACTTATCGTTTAGATCCTGTTGTGAACTTAGGATTTTATTGATTGATACTTCCATTTTCAAATCTACTCGTGACTGCTTCATAAGAGGATTTGCTGATACCAGAATAGAGGCAAGGCCAAGAAGTCCCGGTCCAGGATCGAGAGGACCCACGAGTCCCACATCGCCTCTAAACTCACGGTTCTGTGGCATGAGTCTTGAGTCTCCGACCGGCAAGCTAGATGATGGGAAGAGTCGATGTCATAAGCTGCCGCTTCCTCCAAGCTCTCCCACCAGCCCTTCTTCGTTGACCAGCACGAAAGCTGTCAATATCGGTGATAACGACCCGGCTACCCAATCGAAGTGGAAGAGAGGAAGGCTTCTAGGAAGGGGAACATTTGGGCATGTTTACCTTGGATTTAACAGTGTAAGTGGCCAAATGTGTGCAATTAAGGAGGTCAAGGTTATTAGCGATGACTCGACATCGAAGGAATGTCTCAAGCAATTGAATCAGGAGATAACCGTGCTCAGTCAGCTGTCGCATCCGAACATCGTCCGGTACTATGGTAGTGAAATGGGTGACGAATCGCTCTCCGTCTATTTAGAATACATCTCCGGTGGCTCAATCCACAAATTACTACAAGAATATGGCGCCTTCAAAGAACCTGTTATAAGAAATTATACCCGAAAGATTCTTTCTGGGCTTGCGTATCTGCACGGGAGAAATACAGTGCATAGGGACATCAAAGGGGCTAATATCTTAGTGGATCCAAATGGTGAGGTCAAGTTGGTCGACTTCGGCATGGCAAAACATATGACGAATTGTACTTCGATGCTTTCGTTCAAAGGCAGTCCTTATTGGATGGCCCCTGAGGTTGTGATGCATACAAATGGTTATAGTCTTGCTGTAGATATTTGGAGTTTAGGGTGTACGGTTCTCGAAATGGCAACGTCTAAGCCACCTTGGAGCAAATACGAAGGGGTGGCTGCCATATTCAAAATTGGAAATAGCAAAGATATGCCTGAAATCCCAGACCATCTCTCCTATGATGCTAAAAACTTTGTGCAGCTATGTTTACAACGCGATCCATCGGCACGTCCTTCCGCTGCAGAACTGCTGGATCACCCTTTTGTTCAAGATGCAGTAACACCAAGAGCATCTGATGTCAACTTTTCCGTGGATGCATTTCCCTTTAGCTTCGACGGATTCCAGACTCCGCCATTGTTAGATCAGCATCCAAACAGAAAAAGTATAAGCATATGTGATGGAGACTACGTGACAAACCCGACAACCTCGTCGAGAGCTTTGAGGAGTCCTCCTAGGGGAAATGCACGAATGATCACGTCCTTGCCTGTCTCTCCGTCTTCGAGTCCGTTACGGTCGTATGGCCCGCTACACCAGAGCTGTTATCGTTCACCACCTCACACATCTTACATGGGGTTGGGTCAAAGCTGTTACAATTTAAACGAATACGCATATAACACGAGACCAAACACATTGTTCACTCTCGACCCATCACGAGATTCATCGCTATTGAAAGTGCAGACTCATGGTGGATCACCAAGAAGACCTCTTTGA | 2004 | 47.21 | MPAWWARKFSKNKEHHNPPTNFLNFSKSSTSSPKSEPKKGADTPRSFDDLSSLIFSRNSPRPSRDLASSGVADGGGGSSGFSGFDSDSGDKSHPLPRPATPPAFGIDHGVGIGSGSVSVSSVSSSGSSDDHPSNQEQLQFGAYRFLAGDDLSFRSCCELRILLIDTSIFKSTRDCFIRGFADTRIEARPRSPGPGSRGPTSPTSPLNSRFCGMSLESPTGKLDDGKSRCHKLPLPPSSPTSPSSLTSTKAVNIGDNDPATQSKWKRGRLLGRGTFGHVYLGFNSVSGQMCAIKEVKVISDDSTSKECLKQLNQEITVLSQLSHPNIVRYYGSEMGDESLSVYLEYISGGSIHKLLQEYGAFKEPVIRNYTRKILSGLAYLHGRNTVHRDIKGANILVDPNGEVKLVDFGMAKHMTNCTSMLSFKGSPYWMAPEVVMHTNGYSLAVDIWSLGCTVLEMATSKPPWSKYEGVAAIFKIGNSKDMPEIPDHLSYDAKNFVQLCLQRDPSARPSAAELLDHPFVQDAVTPRASDVNFSVDAFPFSFDGFQTPPLLDQHPNRKSISICDGDYVTNPTTSSRALRSPPRGNARMITSLPVSPSSSPLRSYGPLHQSCYRSPPHTSYMGLGQSCYNLNEYAYNTRPNTLFTLDPSRDSSLLKVQTHGGSPRRPL | 667 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 4459172 | 4463954 | - | Cp4.1LG19g12030.1 | Cpe19g00525 | 485933 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe19g00525 | 667 | MobiDBLite | consensus disorder prediction | 49 | 65 | - | - | |
Cpe19g00525 | 667 | MobiDBLite | consensus disorder prediction | 1 | 135 | - | - | |
Cpe19g00525 | 667 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 1 | 644 | - | - | |
Cpe19g00525 | 667 | SUPERFAMILY | Protein kinase-like (PK-like) | 262 | 601 | IPR011009 | - | |
Cpe19g00525 | 667 | MobiDBLite | consensus disorder prediction | 186 | 258 | - | - | |
Cpe19g00525 | 667 | MobiDBLite | consensus disorder prediction | 114 | 135 | - | - | |
Cpe19g00525 | 667 | SMART | serkin_6 | 264 | 520 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe19g00525 | 667 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 3 | 1 | 644 | - | - | |
Cpe19g00525 | 667 | CDD | STKc_MEKK1_plant | 263 | 520 | - | - | |
Cpe19g00525 | 667 | Pfam | Protein kinase domain | 265 | 520 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe19g00525 | 667 | ProSiteProfiles | Protein kinase domain profile. | 264 | 520 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe19g00525 | 667 | MobiDBLite | consensus disorder prediction | 241 | 258 | - | - | |
Cpe19g00525 | 667 | MobiDBLite | consensus disorder prediction | 200 | 214 | - | - | |
Cpe19g00525 | 667 | MobiDBLite | consensus disorder prediction | 16 | 37 | - | - | |
Cpe19g00525 | 667 | Gene3D | Transferase(Phosphotransferase) domain 1 | 260 | 536 | - | - | |
Cpe19g00525 | 667 | ProSitePatterns | Protein kinases ATP-binding region signature. | 270 | 293 | IPR017441 | GO:0005524 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe10g00335 | Cpe19g00525 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe11g00936 | Cpe-Chr11:7917148 | Cpe19g00525 | Cpe-Chr19:4459172 | 7.56E-90 | dispersed | |
Cpe14g00100 | Cpe-Chr14:541122 | Cpe19g00525 | Cpe-Chr19:4459172 | 1.03E-131 | dispersed | |
Cpe19g00525 | Cpe-Chr19:4459172 | Cpe19g00606 | Cpe-Chr19:4987930 | 4.47E-113 | dispersed | |
Cpe10g00335 | Cpe-Chr10:1945120 | Cpe19g00525 | Cpe-Chr19:4459172 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63033 | PF00069 | Pkinase | 7.20E-73 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe19g00525 | K04421 | - | csv:101203907 | 939.102 |