Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00544 ATGGGGCTGGGAAAGGCTGTCAGCCAGTTTTTGAAAAAGATGGCTGATGCTGAGGATATTCAGCCACTTGTTTGTGACAATGGAACTGGAATGGTGAAGGCCGGTTTTGCTGGTGATGATGCTCCGAGGGCAGTTTTCCCAAGTATTGTTGGTCGTCCCCGACATACTGGTGTCATGGTTGGTATGGGCCAAAAAGATGCCTATGTTGGGGATGAAGCTCAGTCTAAAAGAGGTATCCTTACCTTGAAATATCCCATTGAACATGGTATTGTCAGTAACTGGGATGACATGGAGAAGATTTGGCATCACACGTTCTACAATGAGCTTCGTGTTGCTCCTGAAGAGCACCCCGTGCTTCTGACTGAGGCTCCACTCAACCCAAAGGCTAACAGAGAAAAGATGACTCAAATCATGTTTGAGACATTCAATGTGCCTGCCATGTACGTTGCCATCCAGGCCGTTCTATCACTCTATGCTAGTGGACGTACAACTGGTATCGTGCTGGATTCTGGTGATGGTGTGAGTCACACCGTTCCCATCTATGAGGGTTATGCTCTCCCTCATGCCATTCTCCGTTTGGACCTTGCTGGTCGTGATCTCACTGATGCACTAATGAAGATCCTCACTGAAAGAGGTTACATGTTTACCACTACTGCCGAACGGGAAATTGTCCGTGACATGAAGGAGAAGTTGGCATATGTTGCTCTTGACTACGAACAAGAACTCGAGACTGCAAAGAGCAGTTCCTCAATTGAGAAGAACTACGAACTGCCTGATGGACAAGTCATCACCATTGGAGCTGAGAGATTCCGTTGCCCAGAAGTCCTATTCCAGCCATCTCTCATCGGTATGGAAGCTGCAGGAATCCACGAAACTACCTACAACTCCATCATGAAGTGTGATGTCGATATCAGAAAGGACCTTTATGGAAACATCGTCCTCAGTGGTGGTTCAACCATGTTCCCTGGTATTGCTGACAGGATGAGCAAGGAAATCACAGCCCTTGCTCCCAGCAGCATGAAGATTAAGGTCGTTGCCCCACCAGAAAGGAAATACAGTGTCTGGATTGGAGGGTCTATTCTTGCATCTCTAAGCACCTTCCAGCAGATGTGGATTTCAAAGGGTGAATACGACGAGTCGGGTCCATCCATTGTCCACAGGAAGTGCTTCTAA 1173 47.57 MGLGKAVSQFLKKMADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 4606352 4609916 + Cp4.1LG19g12210.1 Cpe19g00544 485952

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00544 390 CDD NBD_sugar-kinase_HSP70_actin 23 196 - -
Cpe19g00544 390 SUPERFAMILY Actin-like ATPase domain 19 168 IPR043129 -
Cpe19g00544 390 PANTHER ACTIN 14 389 - -
Cpe19g00544 390 Gene3D - 23 384 - -
Cpe19g00544 390 Pfam Actin 18 390 IPR004000 -
Cpe19g00544 390 PANTHER ACTIN 14 389 IPR004000 -
Cpe19g00544 390 ProSitePatterns Actins signature 2. 371 379 IPR004001 -
Cpe19g00544 390 SUPERFAMILY Actin-like ATPase domain 161 390 IPR043129 -
Cpe19g00544 390 SMART actin_3 20 390 IPR004000 -
Cpe19g00544 390 Gene3D Actin; Chain A, domain 4 195 286 - -
Cpe19g00544 390 ProSitePatterns Actins and actin-related proteins signature. 119 131 IPR020902 -
Cpe19g00544 390 PRINTS Actin signature 64 75 IPR004000 -
Cpe19g00544 390 PRINTS Actin signature 130 143 IPR004000 -
Cpe19g00544 390 PRINTS Actin signature 155 174 IPR004000 -
Cpe19g00544 390 PRINTS Actin signature 251 267 IPR004000 -
Cpe19g00544 390 PRINTS Actin signature 41 50 IPR004000 -
Cpe19g00544 390 PRINTS Actin signature 76 98 IPR004000 -
Cpe19g00544 390 ProSitePatterns Actins signature 1. 68 78 IPR004001 -
Cpe19g00544 390 Gene3D - 153 353 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00544 K10355 ACTF; actin, other eukaryote - csv:101215469 758.059
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cpe16g00072 Cpe19g00544 CCT
Cpe10g00351 Cpe19g00544 CST
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01086 Cpe-Chr1:6403428 Cpe19g00544 Cpe-Chr19:4606352 2.01E-07 dispersed
Cpe01g02588 Cpe-Chr1:21003927 Cpe19g00544 Cpe-Chr19:4606352 1.17E-97 dispersed
Cpe04g00400 Cpe-Chr4:4643168 Cpe19g00544 Cpe-Chr19:4606352 0 dispersed
Cpe05g01071 Cpe-Chr5:7093739 Cpe19g00544 Cpe-Chr19:4606352 1.51E-135 dispersed
Cpe19g00544 Cpe-Chr19:4606352 Cpe03g00368 Cpe-Chr3:1975582 0 dispersed
Cpe05g01072 Cpe-Chr5:7096182 Cpe19g00544 Cpe-Chr19:4606352 2.53E-142 transposed
Cpe10g00351 Cpe-Chr10:2078847 Cpe19g00544 Cpe-Chr19:4606352 0 wgd
Cpe16g00072 Cpe-Chr16:1494604 Cpe19g00544 Cpe-Chr19:4606352 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1241 . . . . . . . . Cmo02g00620 Cmo20g01080 Cma03g01077 Cma07g00783 Car03g00968 Car07g00770 Sed01g0035 Cpe19g00544 Cpe10g00351 Bhi03g01386 Tan03g1337 Cmetu11g0408 . Hepe04g1131 . . Cla01g01535 Cam01g1604 Cec04g1251 Cco04g1322 Clacu01g1630 Cmu01g1517 Cre04g1195 . . . . Lsi01g01130 . . Cme08g01062 . Blo06g00212 . . . Bpe06g00278 . . . . Cmo07g00807 . Cma20g01073 . . . Cpe16g00072 Bhi10g02339 Tan07g0883 . . Hepe08g1258 . . Cla02g00072 Cam02g0073 Cec02g0074 Cco02g0067 Clacu02g0071 Cmu02g0070 Cre02g0410 Lsi10g00709 Csa06g02804 Chy02g01031 Cme11g00076
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cpe05g00918 . 3 379 Cytoskeleton Gene Families AT2G37620 96.3 6.9e-215 743.4
Cpe19g00354 . 1 377 Cytoskeleton Gene Families AT2G37620 96.6 5.9e-214 740.3
Cpe10g00886 . 1 377 Cytoskeleton Gene Families AT2G37620 96.3 1.0e-213 739.6
Cpe03g00368 . 1 377 Cytoskeleton Gene Families AT2G37620 96.3 1.3e-213 739.2
Cpe10g00351 CCT,CST 1 377 Cytoskeleton Gene Families AT2G37620 95.5 2.9e-213 738.0
Cpe16g00072 CCT 1 377 Cytoskeleton Gene Families AT2G37620 95.5 2.9e-213 738.0
Cpe19g00544 CCT,CST 14 390 Cytoskeleton Gene Families AT2G37620 95.5 2.9e-213 738.0
Cpe11g00097 . 1 377 Cytoskeleton Gene Families AT2G37620 96.0 3.8e-213 737.6
Cpe01g02297 . 1 377 Cytoskeleton Gene Families AT2G37620 96.0 5.0e-213 737.3
Cpe13g00859 . 1 377 Cytoskeleton Gene Families AT2G37620 95.8 2.5e-212 734.9
Cpe15g00255 . 1 377 Cytoskeleton Gene Families AT2G37620 94.7 2.5e-212 734.9
Cpe16g00608 . 5 381 Cytoskeleton Gene Families AT2G37620 95.2 2.5e-212 734.9
Cpe01g00187 CCT 1 377 Cytoskeleton Gene Families AT2G37620 95.5 4.2e-212 734.2
Cpe04g00400 . 1 377 Cytoskeleton Gene Families AT2G37620 94.4 4.2e-212 734.2
Cpe01g01096 CCT 1 377 Cytoskeleton Gene Families AT2G37620 95.2 7.2e-212 733.4
Cpe05g01072 . 10 203 Cytoskeleton Gene Families AT2G37620 93.3 7.1e-103 371.3
Cpe05g01071 . 1 182 Cytoskeleton Gene Families AT2G37620 97.8 2.1e-102 369.8
Cpe01g02297 . 1 377 Cytoskeleton Gene Families AT5G59370 97.1 1.5e-214 742.3
Cpe13g00859 . 1 377 Cytoskeleton Gene Families AT5G59370 96.8 7.7e-214 740.0
Cpe11g00097 . 1 377 Cytoskeleton Gene Families AT5G59370 96.6 3.8e-213 737.6
Cpe01g01096 CCT 1 377 Cytoskeleton Gene Families AT5G59370 96.0 6.5e-213 736.9
Cpe03g00368 . 1 377 Cytoskeleton Gene Families AT5G59370 96.3 1.4e-212 735.7
Cpe01g00187 CCT 1 377 Cytoskeleton Gene Families AT5G59370 95.8 1.9e-212 735.3
Cpe10g00886 . 1 377 Cytoskeleton Gene Families AT5G59370 96.0 2.5e-212 734.9
Cpe05g00918 . 3 379 Cytoskeleton Gene Families AT5G59370 95.8 3.2e-212 734.6
Cpe16g00608 . 5 381 Cytoskeleton Gene Families AT5G59370 95.8 7.2e-212 733.4
Cpe19g00354 . 1 377 Cytoskeleton Gene Families AT5G59370 95.5 4.6e-211 730.7
Cpe04g00400 . 1 377 Cytoskeleton Gene Families AT5G59370 94.2 1.0e-210 729.6
Cpe15g00255 . 1 377 Cytoskeleton Gene Families AT5G59370 93.9 1.0e-210 729.6
Cpe10g00351 CCT,CST 1 377 Cytoskeleton Gene Families AT5G59370 94.4 3.9e-210 727.6
Cpe16g00072 CCT 1 377 Cytoskeleton Gene Families AT5G59370 94.4 3.9e-210 727.6
Cpe19g00544 CCT,CST 14 390 Cytoskeleton Gene Families AT5G59370 94.4 3.9e-210 727.6
Cpe05g01071 . 1 182 Cytoskeleton Gene Families AT5G59370 98.4 2.1e-102 369.8
Cpe05g01072 . 10 203 Cytoskeleton Gene Families AT5G59370 90.7 9.7e-100 360.9
Cpe01g02297 . 1 377 Cytoskeleton Gene Families AT3G46520 97.3 6.9e-215 743.4
Cpe13g00859 . 1 377 Cytoskeleton Gene Families AT3G46520 97.1 3.4e-214 741.1
Cpe11g00097 . 1 377 Cytoskeleton Gene Families AT3G46520 96.8 1.7e-213 738.8
Cpe01g01096 CCT 1 377 Cytoskeleton Gene Families AT3G46520 96.3 2.9e-213 738.0
Cpe03g00368 . 1 377 Cytoskeleton Gene Families AT3G46520 96.6 6.5e-213 736.9
Cpe01g00187 CCT 1 377 Cytoskeleton Gene Families AT3G46520 96.0 8.5e-213 736.5
Cpe05g00918 . 3 379 Cytoskeleton Gene Families AT3G46520 96.0 1.4e-212 735.7
Cpe16g00608 . 5 381 Cytoskeleton Gene Families AT3G46520 96.0 3.2e-212 734.6
Cpe10g00886 . 1 377 Cytoskeleton Gene Families AT3G46520 95.8 7.2e-212 733.4
Cpe19g00354 . 1 377 Cytoskeleton Gene Families AT3G46520 95.8 2.1e-211 731.9
Cpe04g00400 . 1 377 Cytoskeleton Gene Families AT3G46520 94.4 4.6e-211 730.7
Cpe15g00255 . 1 377 Cytoskeleton Gene Families AT3G46520 94.2 4.6e-211 730.7
Cpe10g00351 CCT,CST 1 377 Cytoskeleton Gene Families AT3G46520 94.7 1.8e-210 728.8
Cpe16g00072 CCT 1 377 Cytoskeleton Gene Families AT3G46520 94.7 1.8e-210 728.8
Cpe19g00544 CCT,CST 14 390 Cytoskeleton Gene Families AT3G46520 94.7 1.8e-210 728.8
Cpe05g01071 . 1 182 Cytoskeleton Gene Families AT3G46520 98.4 2.1e-102 369.8
Cpe05g01072 . 10 203 Cytoskeleton Gene Families AT3G46520 91.2 4.3e-100 362.1
Cpe05g00918 . 3 379 Cytoskeleton Gene Families AT3G12110 96.8 4.1e-215 744.2
Cpe11g00097 . 1 377 Cytoskeleton Gene Families AT3G12110 96.8 2.6e-214 741.5
Cpe01g00187 CCT 1 377 Cytoskeleton Gene Families AT3G12110 96.8 3.4e-214 741.1
Cpe01g01096 CCT 1 377 Cytoskeleton Gene Families AT3G12110 96.8 4.5e-214 740.7
Cpe01g02297 . 1 377 Cytoskeleton Gene Families AT3G12110 96.3 7.7e-214 740.0
Cpe16g00608 . 5 381 Cytoskeleton Gene Families AT3G12110 96.3 7.7e-214 740.0
Cpe19g00354 . 1 377 Cytoskeleton Gene Families AT3G12110 96.3 7.7e-214 740.0
Cpe03g00368 . 1 377 Cytoskeleton Gene Families AT3G12110 96.6 1.0e-213 739.6
Cpe10g00886 . 1 377 Cytoskeleton Gene Families AT3G12110 96.0 1.3e-213 739.2
Cpe13g00859 . 1 377 Cytoskeleton Gene Families AT3G12110 96.0 3.8e-213 737.6
Cpe10g00351 CCT,CST 1 377 Cytoskeleton Gene Families AT3G12110 95.5 1.1e-212 736.1
Cpe16g00072 CCT 1 377 Cytoskeleton Gene Families AT3G12110 95.5 1.1e-212 736.1
Cpe19g00544 CCT,CST 14 390 Cytoskeleton Gene Families AT3G12110 95.5 1.1e-212 736.1
Cpe15g00255 . 1 377 Cytoskeleton Gene Families AT3G12110 95.0 3.2e-212 734.6
Cpe04g00400 . 1 377 Cytoskeleton Gene Families AT3G12110 95.0 7.2e-212 733.4
Cpe05g01071 . 1 182 Cytoskeleton Gene Families AT3G12110 98.9 9.3e-103 370.9
Cpe05g01072 . 10 203 Cytoskeleton Gene Families AT3G12110 92.3 6.1e-102 368.2
Cpe10g00351 CCT,CST 1 377 Cytoskeleton Gene Families AT3G18780 93.1 5.7e-209 723.8
Cpe16g00072 CCT 1 377 Cytoskeleton Gene Families AT3G18780 93.1 5.7e-209 723.8
Cpe19g00544 CCT,CST 14 390 Cytoskeleton Gene Families AT3G18780 93.1 5.7e-209 723.8
Cpe13g00859 . 1 377 Cytoskeleton Gene Families AT3G18780 92.3 1.3e-208 722.6
Cpe01g01096 CCT 1 377 Cytoskeleton Gene Families AT3G18780 92.0 2.8e-208 721.5
Cpe01g02297 . 1 377 Cytoskeleton Gene Families AT3G18780 92.0 3.7e-208 721.1
Cpe05g00918 . 3 379 Cytoskeleton Gene Families AT3G18780 91.8 4.8e-208 720.7
Cpe03g00368 . 1 377 Cytoskeleton Gene Families AT3G18780 91.8 6.3e-208 720.3
Cpe11g00097 . 1 377 Cytoskeleton Gene Families AT3G18780 91.8 6.3e-208 720.3
Cpe04g00400 . 1 377 Cytoskeleton Gene Families AT3G18780 92.3 1.4e-207 719.2
Cpe15g00255 . 1 377 Cytoskeleton Gene Families AT3G18780 92.0 1.4e-207 719.2
Cpe01g00187 CCT 1 377 Cytoskeleton Gene Families AT3G18780 91.5 1.8e-207 718.8
Cpe10g00886 . 1 377 Cytoskeleton Gene Families AT3G18780 91.5 4.1e-207 717.6
Cpe19g00354 . 1 377 Cytoskeleton Gene Families AT3G18780 91.5 1.2e-206 716.1
Cpe16g00608 . 5 381 Cytoskeleton Gene Families AT3G18780 91.2 2.6e-206 714.9
Cpe05g01072 . 10 203 Cytoskeleton Gene Families AT3G18780 92.3 1.3e-101 367.1
Cpe05g01071 . 1 182 Cytoskeleton Gene Families AT3G18780 94.0 2.2e-99 359.8
Cpe10g00351 CCT,CST 1 377 Cytoskeleton Gene Families AT1G49240 93.4 2.0e-209 725.3
Cpe16g00072 CCT 1 377 Cytoskeleton Gene Families AT1G49240 93.4 2.0e-209 725.3
Cpe19g00544 CCT,CST 14 390 Cytoskeleton Gene Families AT1G49240 93.4 2.0e-209 725.3
Cpe13g00859 . 1 377 Cytoskeleton Gene Families AT1G49240 92.6 4.3e-209 724.2
Cpe01g01096 CCT 1 377 Cytoskeleton Gene Families AT1G49240 92.3 9.7e-209 723.0
Cpe01g02297 . 1 377 Cytoskeleton Gene Families AT1G49240 92.3 1.3e-208 722.6
Cpe03g00368 . 1 377 Cytoskeleton Gene Families AT1G49240 92.0 2.2e-208 721.8
Cpe11g00097 . 1 377 Cytoskeleton Gene Families AT1G49240 92.0 2.2e-208 721.8
Cpe04g00400 . 1 377 Cytoskeleton Gene Families AT1G49240 92.6 4.8e-208 720.7
Cpe15g00255 . 1 377 Cytoskeleton Gene Families AT1G49240 92.3 4.8e-208 720.7
Cpe01g00187 CCT 1 377 Cytoskeleton Gene Families AT1G49240 91.8 6.3e-208 720.3
Cpe05g00918 . 3 379 Cytoskeleton Gene Families AT1G49240 91.5 1.1e-207 719.5
Cpe10g00886 . 1 377 Cytoskeleton Gene Families AT1G49240 91.2 9.1e-207 716.5
Cpe19g00354 . 1 377 Cytoskeleton Gene Families AT1G49240 91.2 2.6e-206 714.9
Cpe16g00608 . 5 381 Cytoskeleton Gene Families AT1G49240 91.0 5.9e-206 713.8
Cpe05g01072 . 10 203 Cytoskeleton Gene Families AT1G49240 92.3 1.3e-101 367.1
Cpe05g01071 . 1 182 Cytoskeleton Gene Families AT1G49240 94.5 7.4e-100 361.3
Cpe10g00351 CCT,CST 1 377 Cytoskeleton Gene Families AT5G09810 98.4 9.7e-217 749.6
Cpe16g00072 CCT 1 377 Cytoskeleton Gene Families AT5G09810 98.4 9.7e-217 749.6
Cpe19g00544 CCT,CST 14 390 Cytoskeleton Gene Families AT5G09810 98.4 9.7e-217 749.6
Cpe04g00400 . 1 377 Cytoskeleton Gene Families AT5G09810 96.6 5.3e-215 743.8
Cpe15g00255 . 1 377 Cytoskeleton Gene Families AT5G09810 95.8 3.4e-214 741.1
Cpe05g00918 . 3 379 Cytoskeleton Gene Families AT5G09810 95.2 1.1e-212 736.1
Cpe01g02297 . 1 377 Cytoskeleton Gene Families AT5G09810 95.8 1.4e-212 735.7
Cpe16g00608 . 5 381 Cytoskeleton Gene Families AT5G09810 95.5 2.5e-212 734.9
Cpe01g01096 CCT 1 377 Cytoskeleton Gene Families AT5G09810 95.8 3.2e-212 734.6
Cpe03g00368 . 1 377 Cytoskeleton Gene Families AT5G09810 95.8 3.2e-212 734.6
Cpe11g00097 . 1 377 Cytoskeleton Gene Families AT5G09810 95.8 3.2e-212 734.6
Cpe10g00886 . 1 377 Cytoskeleton Gene Families AT5G09810 95.2 4.2e-212 734.2
Cpe13g00859 . 1 377 Cytoskeleton Gene Families AT5G09810 95.5 7.2e-212 733.4
Cpe19g00354 . 1 377 Cytoskeleton Gene Families AT5G09810 95.2 1.2e-211 732.6
Cpe01g00187 CCT 1 377 Cytoskeleton Gene Families AT5G09810 95.0 3.6e-211 731.1
Cpe05g01072 . 10 203 Cytoskeleton Gene Families AT5G09810 97.4 1.2e-105 380.6
Cpe05g01071 . 1 182 Cytoskeleton Gene Families AT5G09810 99.5 4.2e-103 372.1
Cpe12g00643 CCT,CST,ECH 1 131 Cytoskeleton Gene Families AT2G19760 76.3 2.7e-57 218.4
Cpe07g01035 CST 1 132 Cytoskeleton Gene Families AT2G19760 77.3 1.3e-56 216.1
Cpe11g01145 . 1 133 Cytoskeleton Gene Families AT2G19760 75.9 3.0e-56 214.9
Cpe11g01155 . 1 133 Cytoskeleton Gene Families AT2G19760 75.9 3.0e-56 214.9
Cpe17g00524 CCT,CST,ECH 1 131 Cytoskeleton Gene Families AT2G19760 73.3 1.9e-55 212.2
Cpe03g01090 CCT,CST,ECH 1 129 Cytoskeleton Gene Families AT2G19760 73.6 1.6e-54 209.1
Cpe02g01699 CCT,CST,ECH 1 129 Cytoskeleton Gene Families AT2G19760 72.9 2.4e-53 205.3
Cpe11g01144 CST 1 122 Cytoskeleton Gene Families AT2G19760 72.1 3.0e-48 188.3
Cpe12g00643 CCT,CST,ECH 1 131 Cytoskeleton Gene Families AT4G29350 76.3 7.9e-57 216.9
Cpe17g00524 CCT,CST,ECH 1 131 Cytoskeleton Gene Families AT4G29350 74.0 1.5e-55 212.6
Cpe07g01035 CST 160 290 Cytoskeleton Gene Families AT4G29350 75.6 5.6e-55 210.7
Cpe11g01145 . 1 133 Cytoskeleton Gene Families AT4G29350 74.4 1.3e-54 209.5
Cpe11g01155 . 1 133 Cytoskeleton Gene Families AT4G29350 74.4 1.3e-54 209.5
Cpe03g01090 CCT,CST,ECH 1 131 Cytoskeleton Gene Families AT4G29350 71.8 3.1e-53 204.9
Cpe02g01699 CCT,CST,ECH 1 131 Cytoskeleton Gene Families AT4G29350 69.5 1.0e-51 199.9
Cpe11g01144 CST 1 122 Cytoskeleton Gene Families AT4G29350 71.3 7.4e-47 183.7
Cpe11g01145 . 1 133 Cytoskeleton Gene Families AT4G29340 83.6 8.9e-64 240.0
Cpe11g01155 . 1 133 Cytoskeleton Gene Families AT4G29340 83.6 8.9e-64 240.0
Cpe07g01035 CST 1 131 Cytoskeleton Gene Families AT4G29340 84.8 7.5e-63 236.9
Cpe12g00643 CCT,CST,ECH 1 131 Cytoskeleton Gene Families AT4G29340 76.9 3.9e-59 224.6
Cpe17g00524 CCT,CST,ECH 1 131 Cytoskeleton Gene Families AT4G29340 76.1 1.1e-58 223.0
Cpe02g01699 CCT,CST,ECH 1 131 Cytoskeleton Gene Families AT4G29340 70.9 2.4e-53 205.3
Cpe03g01090 CCT,CST,ECH 1 131 Cytoskeleton Gene Families AT4G29340 70.1 2.4e-53 205.3
Cpe11g01144 CST 1 122 Cytoskeleton Gene Families AT4G29340 65.6 4.9e-46 181.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000079 8 8 7 8 6 8 16 8 8 7 8 8 15 7 7 14 8 15 16 8 7 7 6 8 8 8 7 14 15 6 276
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe19g00544 Cpe_Chr19 FPKM 124.039421 133.812469 3.538691 3.73989 10.240233 8.948735 7.413925 1.727841 2.156297 1.535063