Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00597 ATGGCCGATTTCCAGACCTCGACTCAACGAGCCAAATGGATCTTGAGTCCTCACGAGCTGGTTGGCAGGTACAAAGCTGCTAACCAGAGAGCAATCGAAGCTCTGGAGAAGTTTGGAGCAACACTGATGGTGGTAGATGCAGACGGATCATTGTCCTATCCAGACCCTCTGATAAATTCAAAAGAAAATGCTGACAAACATTCCCGCCCCAAACCTTTGAGTATTGAAGAAGAGCAATTTATGCGAGTATTTTACGAGAACAAACTTCAAGAAGTATGCAACAATTTTCATTTTCCTCATAAAATCCAGGCAACGGCTCTTATATATTTTAAGAGATTCTACTTACAATGGTCTGTGATGCAACATAATCCCAAAAATGTGATGTTGACTTGCATTTATGCAGCTTGTAAGATAGAAGAAAATCATGTCTCAGCTGAGGAGCTTGGCAAGGGGATTTCACAGGATCATCAAATTATTCTCAATTATGAGATGATAAGTCTGGAATTTGATCTTATTGTTTATGCACCTTACCGATCAGTTGAAGGCTATGTACATGATATGGAGGAAGTCTTCCATGAGAATGCTGAAAGGCTTCAAATGCTGAAGGAAACAGCATCGTTAGAGGTTGATAAAATTATGTTAACAGATGCCCCACTTCTCTTCCCTCCTGGGCAGTTAGCATTGGCTGCATTGCGCAGATCAAATGAAGTTCATGGAGTTATTGACTTTGAAAGGTACCTGGATAGTATTCTCTCTCGCCAAAATTCTGCACATATAATTTCTGAGCTCTATGAGCGTTTTAATTCAATTGACTCATGGATTAATAAATATGCATTCCCTTCAGAAAAGGACTTAAAGCACATCAACAGAAAATTAAAATCTTGCTGGGGACTGGGCTCCAATGACGAGAGTAAAAAAAGGGAGAAGAAATCAAAGCACAAATCAAAGAAGAAATATGCCTTCGCACACTTAGCTGTACGCAAATCTCAGCAGGGGACTGACAAAAAAGGAGAGCTAGGCAATTGGAAGAAGCAACAAGGCTTAGGCTTT 1050 40.29 MADFQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINSKENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMISLEFDLIVYAPYRSVEGYVHDMEEVFHENAERLQMLKETASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWINKYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKKKYAFAHLAVRKSQQGTDKKGELGNWKKQQGLGF 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 4941906 4949612 + Cp4.1LG19g11620.1 Cpe19g00597 486005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00597 350 PANTHER CYCLIN 1 325 IPR043198 GO:0006357|GO:0016538
Cpe19g00597 350 CDD CYCLIN 81 165 IPR013763 -
Cpe19g00597 350 Pfam Cyclin C-terminal domain 176 270 IPR031658 -
Cpe19g00597 350 Gene3D - 174 276 - -
Cpe19g00597 350 SUPERFAMILY Cyclin-like 176 297 IPR036915 -
Cpe19g00597 350 MobiDBLite consensus disorder prediction 309 323 - -
Cpe19g00597 350 MobiDBLite consensus disorder prediction 299 350 - -
Cpe19g00597 350 Gene3D - 47 171 - -
Cpe19g00597 350 SMART cyclin_7 87 168 IPR013763 -
Cpe19g00597 350 SUPERFAMILY Cyclin-like 66 173 IPR036915 -
Cpe19g00597 350 Pfam Cyclin, N-terminal domain 67 146 IPR006671 -
Cpe19g00597 350 PANTHER CYCLIN-H 1 325 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00413 Cpe-Chr10:2423041 Cpe19g00597 Cpe-Chr19:4941906 1.54E-123 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00597 K06634 - csv:101220754 558.525