Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00628 ATGTCTGATCACAAATCAGGCTCCATGACCGACCAGCTCTCCAACCAGACTTCTATTTTTGGCCTACGCTTGTGGGTTGTACTTGGGGTTTGTGTTGGAGCTGCTTTTGTGCTTTTTCTGTTTCTAATTTCTCTTTGGATTGCCTCCAAACGCTCTCGCAGGAAGATTTCTCACAGACCCACAATTCCAGTCGACTCCAAAGAAATTCAAGAGATCAGAATCGATCATGCTCTCGCTCAAACCCAAGAACACAAGCCAACTAGACCCCATTTTCAGGTCGACCCTCTTCCAGAGCCGGAGATTATCCCTGGAATTGAGCGGCAAGCATTGCTTTCGTTGCCTCAGGAGGAAGAACGAGTGAATAGAATTCATATTGAGATCGGGAAGGATCATAGGATTTCCTATCCTGAGCGACTTGGTCGGTCGTCTTCCTCCCAGGGCAGTGGAGAGGGCCGATGTGGTGGCGATCAGTTGCCTATAGTGGTGCCTGAAGTTTCGCATTTGGGTTGGGGGCATTGGTACACTCTCAGAGAGCTTGAAGCTTCGACTAATGGTTTTTCCCCTGATAACGTAATCGGTGAAGGTGGGTATGGAATTGTTTACCATGGCATATTGGAGGATGGAACTCAGGTTGCTGTTAAGAATTTGCTAAACAATAGAGGACAAGCCGAGAAGGAGTTTAAAGTAGAAGTTGAAGCAATTGGACGAGTCAGACATAAGAACTTAGTTAGATTGCTGGGATACTGTGCTGAAGGTGCTCATAGGATGCTTGTATACGAGTACATAAATAATGGAAACTTGGAACAATGGCTTCATGGGGAAGTAGGATCTTACAGTCCTCTTACCTGGGAGATCAGAATGAATATCATTCTTGGAACCGCTAAAGGGCTAGCTTACCTTCACGAGGGATTGGAACCGAAGGTTGTTCACCGGGATATCAAATCAAGCAATATCTTACTTGATAAGCAATGGAATTCCAAGGTTTCAGATTTTGGGCTTGCAAAGCTACTATGCTCTGATAACAGCTATATTACAACCCGTGTCATGGGAACATTTGGCTATGTAGCGCCAGAATATGCAAGTACGGGGATGCTAAATGAAAGAAGTGATGTGTATGGTTTTGGAATACTTGTTATGGAAATAATCTCAGGAAGGAACCCGGTCGACTATAGTCGTCCTCCAGATGAGGTGAACTTGATCGATTGGCTTAAGAGAATGGTCAGTAACCGGAATCCAGAGGGCGTATTGGATCCAAAGCTCTCTGAAAAGCCTACTTCGAGAGCATTAAAGCGGGCGCTTCTTGTTGCATTACGCTGCGTGGACCCAAATGCTCAGAAACGGCCAAAAATGGGACATATTATTCATATGCTTGAAGCTGAAGAGGCTACGTTTAAAGGGGATCGCAAAGCTGGGAAGGACCCGGAGAACTCACAAGACAATGTGAAGGATGGTTTAAATGAGAGGCAGGCAACAGAATTAGGTGGCAGCAATGTGGATGAACTCAGTATGCGACAATGA 1518 45.45 MSDHKSGSMTDQLSNQTSIFGLRLWVVLGVCVGAAFVLFLFLISLWIASKRSRRKISHRPTIPVDSKEIQEIRIDHALAQTQEHKPTRPHFQVDPLPEPEIIPGIERQALLSLPQEEERVNRIHIEIGKDHRISYPERLGRSSSSQGSGEGRCGGDQLPIVVPEVSHLGWGHWYTLRELEASTNGFSPDNVIGEGGYGIVYHGILEDGTQVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYINNGNLEQWLHGEVGSYSPLTWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKQWNSKVSDFGLAKLLCSDNSYITTRVMGTFGYVAPEYASTGMLNERSDVYGFGILVMEIISGRNPVDYSRPPDEVNLIDWLKRMVSNRNPEGVLDPKLSEKPTSRALKRALLVALRCVDPNAQKRPKMGHIIHMLEAEEATFKGDRKAGKDPENSQDNVKDGLNERQATELGGSNVDELSMRQ 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 5107618 5112611 - Cp4.1LG19g11110.1 Cpe19g00628 486036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00628 505 Gene3D Transferase(Phosphotransferase) domain 1 262 473 - -
Cpe19g00628 505 MobiDBLite consensus disorder prediction 464 486 - -
Cpe19g00628 505 CDD STKc_IRAK 192 458 - -
Cpe19g00628 505 Gene3D Phosphorylase Kinase; domain 1 168 261 - -
Cpe19g00628 505 Pfam Protein kinase domain 189 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe19g00628 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Cpe19g00628 505 ProSiteProfiles Protein kinase domain profile. 186 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe19g00628 505 MobiDBLite consensus disorder prediction 490 505 - -
Cpe19g00628 505 PANTHER OS01G0323000 PROTEIN 1 498 - -
Cpe19g00628 505 SUPERFAMILY Protein kinase-like (PK-like) 167 458 IPR011009 -
Cpe19g00628 505 SMART serkin_6 186 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe19g00628 505 ProSitePatterns Protein kinases ATP-binding region signature. 192 214 IPR017441 GO:0005524
Cpe19g00628 505 MobiDBLite consensus disorder prediction 464 505 - -
Cpe19g00628 505 PANTHER RECEPTOR-LIKE KINASE PLANT 1 498 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00441 Cpe19g00628 CCT
Cpe10g00441 Cpe19g00628 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00537 Cpe-Chr15:6249056 Cpe19g00628 Cpe-Chr19:5107618 1.32E-138 dispersed
Cpe15g00882 Cpe-Chr15:8512397 Cpe19g00628 Cpe-Chr19:5107618 2.62E-22 dispersed
Cpe16g00727 Cpe-Chr16:7384870 Cpe19g00628 Cpe-Chr19:5107618 2.47E-178 dispersed
Cpe10g00441 Cpe-Chr10:2576118 Cpe19g00628 Cpe-Chr19:5107618 0 wgd
Cpe11g00144 Cpe-Chr11:786439 Cpe19g00628 Cpe-Chr19:5107618 0 wgd
Cpe19g00628 Cpe-Chr19:5107618 Cpe07g00490 Cpe-Chr7:3199557 3.93E-44 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63042 PF00069 Pkinase 2.60E-46 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00628 - - cmax:111497422 986.867