Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe19g00630 | ATGTGGGATCTGAACGATTGTCCGGATGAGAGGAAGGAGGATGAATCGGAAGGGTGTTGGTCAGCGAAGACTTGGATTGAGGGAGAGGGGGAAGAGGAGAAGGGGAAAAGAGTGGGATCCGTTTCCAATTCCAGTTCTTCCGCGGTGCTTGTGGAGGATGGATCGGATGAAGATGCGCCCACCCCCAACGCATTACTCATGCAAATTAACGCACCCAGTCCTGTCACTCGCCAGTTTTTCCCACTCCAACACCCTCAAATCTCTTCTTCTTCTTCCTCTCCTTCTCCAACTACTGCTTCTACCTTCCCTCAGGCTCACTGGGTTGGGGTCAAATTTGGGCATCCCGATCCTTTTGCCGCACCTGCTCCTCCTAATTCCATCAAGTCCACCGAGATTTCCCAGCCCATTAAGAAGAGTCGCCGCGGACCCAGGTCGCGTAGCTCTCAGTACCGCGGCGTCACTTTCTACCGGAGAACCGGCCGTTGGGAGTCACATATATGGGATTGTGGAAAGCAGGTTTATCTGGGTGGATTCGATACGGCACATGCAGCTGCTCGTGCTTACGATAGAGCGGCCATTAAATTCCGCGGAGTGGAAGCGGACATAAACTTCAGCATCGAAGATTACGAGGAGGACTTAAAACAGATGGGAAATTTAACGAAGGAGGAATTTGTGCATGTACTTCGCCGACAGAGCACTGGGTTTCCCAGAGGAAGCTCCAAGTATAGAGGCGTAACGCTGCACAAGTGCGGAAGATGGGAGGCCAGAATGGGCCAATTTCTTGGCAAAAAGTATGTGTATTTGGGTTTGTTTGATACGGAAATTGAAGCTGCAAGGCAAAAAAGAGAGCATTGTTTAAATTCAACCGCCAATTTGGGAGATCACAGTCTTGATTTGAGTTTGGGAAATTCAAGCTCAAACCAAAACGACACCCCAAAGCCTTCCATAGATCCCCACCATTCTTCTTCTTCTTCAGCTCCTCTATCCATGGAAGACGACTGGCAACGCACTCAAGGATTTAGGCGTCCTCAGCTAAATTTGGTAGAAGAATCAAGTGGAGCAGGTGGAAATAAACATTTGAAGGCAGCAGAGGGAAGAAATAATAGGTACCTGGAGAGTGAAACGATGCAGCGTCTAAGCCAAACGCACATTCAATCACCGGCTTCATTTGAAATGCAAAGACACGCCCAATTCAGCCGGCAGATAGCGGGTGGAGATCACAATCACAATCCAACCCTCAATTATCAAATTCAGTTTGGGGGCAGCAGTAATGGTGGAGGAGGGCGAATAGGAAGCGATCTATCACTGTCTCTAAATGATCATAATCAAGTTGTTGATTATTCGGGGCCATCTCAAGCTCTTGCAACTGCTGCAGCATCATCAGGATTCGCACCCCCTTCCAAAAATTGGCTGCACAACAATGGGTTTCACTGTCTAATGAGACCCTCCTGA | 1452 | 48.83 | MWDLNDCPDERKEDESEGCWSAKTWIEGEGEEEKGKRVGSVSNSSSSAVLVEDGSDEDAPTPNALLMQINAPSPVTRQFFPLQHPQISSSSSSPSPTTASTFPQAHWVGVKFGHPDPFAAPAPPNSIKSTEISQPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFSIEDYEEDLKQMGNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARQKREHCLNSTANLGDHSLDLSLGNSSSNQNDTPKPSIDPHHSSSSSAPLSMEDDWQRTQGFRRPQLNLVEESSGAGGNKHLKAAEGRNNRYLESETMQRLSQTHIQSPASFEMQRHAQFSRQIAGGDHNHNPTLNYQIQFGGSSNGGGGRIGSDLSLSLNDHNQVVDYSGPSQALATAAASSGFAPPSKNWLHNNGFHCLMRPS | 483 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 5121137 | 5124674 | - | Cp4.1LG19g11140.1 | Cpe19g00630 | 486038 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe19g00630 | 483 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
Cpe19g00630 | 483 | MobiDBLite | consensus disorder prediction | 113 | 149 | - | - | |
Cpe19g00630 | 483 | CDD | AP2 | 240 | 279 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe19g00630 | 483 | SUPERFAMILY | DNA-binding domain | 148 | 206 | IPR016177 | GO:0003677 | |
Cpe19g00630 | 483 | CDD | AP2 | 149 | 204 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe19g00630 | 483 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 1 | 465 | - | - | |
Cpe19g00630 | 483 | MobiDBLite | consensus disorder prediction | 297 | 332 | - | - | |
Cpe19g00630 | 483 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Cpe19g00630 | 483 | SMART | rav1_2 | 149 | 211 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe19g00630 | 483 | SMART | rav1_2 | 241 | 295 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe19g00630 | 483 | ProSiteProfiles | AP2/ERF domain profile. | 241 | 279 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe19g00630 | 483 | Gene3D | AP2/ERF domain | 148 | 207 | IPR036955 | GO:0003700|GO:0006355 | |
Cpe19g00630 | 483 | Gene3D | AP2/ERF domain | 240 | 286 | IPR036955 | GO:0003700|GO:0006355 | |
Cpe19g00630 | 483 | MobiDBLite | consensus disorder prediction | 297 | 334 | - | - | |
Cpe19g00630 | 483 | SUPERFAMILY | DNA-binding domain | 240 | 279 | IPR016177 | GO:0003677 | |
Cpe19g00630 | 483 | Pfam | AP2 domain | 240 | 282 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe19g00630 | 483 | Pfam | AP2 domain | 149 | 197 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe19g00630 | 483 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR TOE3 | 1 | 465 | - | - | |
Cpe19g00630 | 483 | ProSiteProfiles | AP2/ERF domain profile. | 149 | 205 | IPR001471 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe10g00444 | Cpe19g00630 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe16g00565 | Cpe-Chr16:6443669 | Cpe19g00630 | Cpe-Chr19:5121137 | 4.58E-78 | dispersed | |
Cpe19g00398 | Cpe-Chr19:3551661 | Cpe19g00630 | Cpe-Chr19:5121137 | 2.25E-63 | dispersed | |
Cpe10g00444 | Cpe-Chr10:2595462 | Cpe19g00630 | Cpe-Chr19:5121137 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
51003 | PF00847 | AP2 | 6.90E-10 | CL0081 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe19g00630 | K09284 | - | csv:101214724 | 543.502 |