Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cpe19g00633	ATGGAATTTCAGTTGAAGTCAATGGAGTCAAACGCTTCCCAACAATTTTGCTCCATCCCCTGCGACCCACCCTCACGTGATTGCCCCCAGAAAGTGCTTTTTACAAACACCACCAGCTGCTCCGCATCACTTTCTTTTTTTTTTTCTCCATCACTTCCTTCTTTCTCTCCGCCGCCGTCTCGGCTCGGAGCTCCCGTCGGGATAATGAACCCCAAGCCCTCCGCATTCTCCTCTTTCCTTCCACTTCTATTTTCTGTTCTGCTTTTTTCTCTCTCGGATTTCGCCTCGTTTAGTTTTGCCTTTCAAATTCCGCCGCCGGCGCTTGTCCCACCGGAAGAATTGATGCTGCCGTCTGACGCCGTTTCGCTTCTTTCGTTCAAGTCCAAAGCCGACTTGGATAACAAGCTTCTTTACACTCTCAATGAGCGATTTGATTACTGTCAATGGCAGGGTGTGAAGTGCGTCCAGGGTCGTGTTGTTCGTTTGGTTCTTCAATCGTTTGGGCTCCGAGGGATATTGGCTCCAAACACTGTGTCTAAGCTCGACCAGCTTCGGTTCCTCAGCCTGCATAATAACTCGCTCGAAGGACCCATTCCTGACCTATCCGGACTCTTCAATCTCAAATCTCTGTTCCTTGGCCGAAACTCTTTCGTTGGGTCTTTTCCGCCGTCGATTCTCACTCTTCACCGGCTTCAGACTCTTGATCTTTCCTACAACAACTTCACCGGTCCTCTTCCGGTGAGGCTTTCCTCGTTGGACCGTCTCATTACGCTCCTTCTCGAGTGGAATGGTTTCAATGGAACTATTCCGCCCTTAAATCAATCATATCTTGAAGTCTTCAATGTCACGGGGAACAATCTCACCGGGCGAGTTCCGGTGACCCCCACTCTCTCGCGTTTCAACACGTCGTCATTTTTCTGGAATCCAGATCTCTGCGGCGAGATCGTCAACAAGGCATGTCATTCACCCGCTCCATTCTTTGAAGCTTCCAATGCCACCGCTCCATCTCACCCTTCTGTCCAAAGCGCACAGTCACAGGACGTAGTTCAATCTCCAGTCTCTCATGCTAAGCACAAGGAAACGAATATGATTTTGGGGCTTTCAGTGGCCGCCGCAGTCTTAGTAGCAGGTCTTTTATGTTTCTTCGTAGCAGCCAGAACCCAAAGAAGACGAACTGTATCAAAGCCAGCAATTGCGCAGTTTGAGCCCGAAATTGGTTATTCCACAGCTTCCGCAATCGACGAGCGAGTCGACAGGAAGGGCGAATTTCAAGCGAAAGTGAAGGAAATTGAAGAAATTCCAAAAGCCCATAAGAGTGGGTGTCTTATATTTTGTGAAGGGGAGGCAGAGTTATTCAGCTTAGAGCAGTTAATGAGGGCTTCGGCCGAGCTACTAGGTAGAGGCACAATGGGAACTACATATAAAGCCGTGCTCTGCAACCAGTTAATCGTAACGGTGAAGCGTCTTGATGCTACTAAGACCGCCATAACGAGCAGCGAAGTGTTCGACCGGCATTTGGAAGCAGTGGGTGCACTTCGCCATCCCAATTTAGTACCAGTTAGGGCCTACTTTCAAGCCAGGGGAGAGAGATTAGTGGTTTACGATTACCAACCTAACGGCAGTCTTTACAACCTCATTCACGGTTCACGATCAGCAAGGGCTAAGCCTCTGCACTGGACATCATGCTTGAAGATTGCAGAAGATTTAGCACAAGGCATTGCTTATATACATCAAGCTTCTAAGTTAATCCATGGCAACTTGAAGTCTACTAATGTGCTCCTAGGAGCAGACTTCGAGGCCTGCCTCACAGACTATGGCCTTTCTGTTCTGGCAGAGTCCCCTGAAGATCCAGATTCTTCACGCTACCAGGCACCTGAAGTTCGGAAATCCAGCCGCAACGCTACCCACAAGAGCGATGTATACGCCTTTGGCGTCCTCTTGCTGGAGCTTTTGACAGGAAGACATCCATCAAACCATCCATTTGTTGAGCCAAGTGATATGCCAGAATGGGTAAGGGCAGTTAGGGAAGATGATGGTGGGGATAGTAGCCAACTTGGAATGCTTACTGAGGTGGCTAGCATGTGTAGTAGTACATCCCCTGAACAGAGGCCACCCATGTGGCAAGTTTTGAAAATGATAATGGAGATTAAAGAGAGTGTGATGACAGAGGACAGTGAATCTAGTGGCTTTTAA	2193	48.7	MEFQLKSMESNASQQFCSIPCDPPSRDCPQKVLFTNTTSCSASLSFFFSPSLPSFSPPPSRLGAPVGIMNPKPSAFSSFLPLLFSVLLFSLSDFASFSFAFQIPPPALVPPEELMLPSDAVSLLSFKSKADLDNKLLYTLNERFDYCQWQGVKCVQGRVVRLVLQSFGLRGILAPNTVSKLDQLRFLSLHNNSLEGPIPDLSGLFNLKSLFLGRNSFVGSFPPSILTLHRLQTLDLSYNNFTGPLPVRLSSLDRLITLLLEWNGFNGTIPPLNQSYLEVFNVTGNNLTGRVPVTPTLSRFNTSSFFWNPDLCGEIVNKACHSPAPFFEASNATAPSHPSVQSAQSQDVVQSPVSHAKHKETNMILGLSVAAAVLVAGLLCFFVAARTQRRRTVSKPAIAQFEPEIGYSTASAIDERVDRKGEFQAKVKEIEEIPKAHKSGCLIFCEGEAELFSLEQLMRASAELLGRGTMGTTYKAVLCNQLIVTVKRLDATKTAITSSEVFDRHLEAVGALRHPNLVPVRAYFQARGERLVVYDYQPNGSLYNLIHGSRSARAKPLHWTSCLKIAEDLAQGIAYIHQASKLIHGNLKSTNVLLGADFEACLTDYGLSVLAESPEDPDSSRYQAPEVRKSSRNATHKSDVYAFGVLLLELLTGRHPSNHPFVEPSDMPEWVRAVREDDGGDSSQLGMLTEVASMCSSTSPEQRPPMWQVLKMIMEIKESVMTEDSESSGF	730

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
19	5138221	5141853	-	Cp4.1LG19g11150.1	Cpe19g00633	486041

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cpe19g00633	730	Gene3D	Phosphorylase Kinase; domain 1	423	536	-	-
	Cpe19g00633	730	Pfam	Protein kinase domain	462	659	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Cpe19g00633	730	PANTHER	PROTEIN KINASE, PUTATIVE-RELATED	87	726	-	-
	Cpe19g00633	730	ProSiteProfiles	Protein kinase domain profile.	459	721	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Cpe19g00633	730	MobiDBLite	consensus disorder prediction	619	633	-	-
	Cpe19g00633	730	SUPERFAMILY	L domain-like	119	313	-	-
	Cpe19g00633	730	Gene3D	Transferase(Phosphotransferase) domain 1	538	728	-	-
	Cpe19g00633	730	MobiDBLite	consensus disorder prediction	612	633	-	-
	Cpe19g00633	730	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	87	726	-	-
	Cpe19g00633	730	Gene3D	Ribonuclease Inhibitor	275	323	IPR032675	-
	Cpe19g00633	730	SUPERFAMILY	Protein kinase-like (PK-like)	463	718	IPR011009	-
	Cpe19g00633	730	Gene3D	Ribonuclease Inhibitor	117	274	IPR032675	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	Cpe10g00446	Cpe19g00633	CCT
	Cpe10g00446	Cpe19g00633	ECH

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	Cpe19g00633	Cpe-Chr19:5138221	Cpe11g01095	Cpe-Chr11:9123791	1.66E-110	dispersed
	Cpe01g00897	Cpe-Chr1:5271688	Cpe19g00633	Cpe-Chr19:5138221	2.17E-158	transposed
	Cpe10g00446	Cpe-Chr10:2605039	Cpe19g00633	Cpe-Chr19:5138221	0	wgd

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	63043	PF00069	Pkinase	2.90E-30	CL0016	Cpe	PK

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cpe19g00633	-		-	bhj:120074099	1129.78