Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe19g00640 | ATGGATGATGGAACTTCTAATAGTTCAACACAATCTGCAGTCAATAATCCAGCTCCAACTGTCCATAGGCAAAATAGTACAGGAGACCATTTGACATCTATTTTATCTCCGTCTGGAATATCATCTTGGGCTAAGAGTTTTAGAAATCCACAACCGCCTGAAGCAGCAGAAAATGACTCTAAGGCAGGAAATGCTGGGATGTCAGCAATTGCTCGTTTCAGTAGTGGCTTTGGATTGCGGATGCCTTCAATGTCTCCTGTACGAGATGATACTGCTGCAGATACCAAAGCAGCAGCGCAATCTGATGTTTTCAAATCAATCACAAAAGGTTTAGTTGACACATCTCAGAATGCAGTAAAGGCTATGCAGGTAAAGGCACGCCATATTGTATCTCAGAACAAACGAAGATATCAGGAAGGAGAATTTGATTTGGATATGACATATATCACTGAAAATATAATTGGTATGGGGTTTCCTGCTGGTCACATGAGCTCCGGTTTATTTGGTTTCATTGAGGGATTTTACAGAAATCATATGGAAGAAGTGATCAAATTCTTTGAAACTCATCATAAGGGAAAATACAAAGTTTACAATCTTTGCTCAGAGCGTTTGTATGATGCCTCATTATTTGAGGGGAAGGTTGCACATTTCCCGTTTGATGATCATAATTGTCCTCCTATCCATCTCATAAAATCATTTTGTCTAAGTGCTTATGCATGGTTAAAGGAGGATATTGAGAATGTGGTTGTTGTTCATTGTAAAGCTGGTATGGCACGAACAGGGCTAATGATTTGCAGCCTCCTTTTATTTCTAAAGTTCTTCCATACGTCAGCAGAGGCAATTGACTATTACAATCAGAAAAGATGCGTGGATGGAAAGGCTTTGGTTCTTCCTAGCCAGATTAGGTATGTCAAATACTTTGAGCGCATTTTAATACATTTCAACGGAAATACTCCACCAGGACGGAGGTGCATGCTGAGAGGCTTTCGGCTTCACAAGTGCCCGTATTGGGTTAGGCCTTCGATTACAATTTCAAATCACAGTGCCTCTGCTTTTTATAGAGATGTGATTGGTCGTCTGTGTATCTATCTGACACATGCTTGTAAACATTTGTTTTCGTTCACTGATTACTTTGATAATGCCAAGCTGGCAAGCTATGTTTCAACAATACCTTGTAGAGATTTTGTTCTCAACAAAAAAGCATCCAAAGACAAAGGATTTGATGGTAAGCCAGAAGATTTCTGGATTAGAGCACCAAAGAAAGGATTTGTAGTCTTTGCACTGCCAGGTGAGCCTGGTTTGACAGAGTTATCTGGGGACTTTAAGATTCATTTTCATGACCGCCATGGAGATTTTTATTGTTGGTTAAATACGACAATGACAGAAAACAAAGTATTATTAAGCGACACAGATCTTGATGGTTTTGATAAGAGAAAACTTCCTACTCCTGGATTCCAGGTCGAGGTTGTGATGATAGACTATAATGGTACTTTGCCAACACGATCGAAAACTAATTCTGCTGGCAAAGGATCTGATTGTCGTCCTATTCATGATCGGGTTCCAGGTCATGAGGCGGCACAATCGAGCAAAAACAAAATTCCTGAGAGTGAAGAAAATGATGATGTATTCTCTGATAGTGATGAAGAAAATGGTGACACAAAAACTGGTCTAGCTCAATCAACTTCTGAAACTGCAAAAGTTGACCATTCATCAACAGCAATTTCTTCTGATAAAATTGGGAGTTTAGCGCGTGAAACAAATCATTTGTCACTTGGGAATGAGAGAAATCTACAAATCAATGCTCCAAAAGAACCAAACATTGGTGGCATGATACAACCGTCAGGCCTCGAGACCCCAAATATGGATTCGGCAAGCGCAAGTGAATTCAAAGCAATAGCCGCTGATGCATCAGTTTTCACTTTTGGGGATGAAGAAGACTTTGATAGTGAATGA | 1953 | 39.89 | MDDGTSNSSTQSAVNNPAPTVHRQNSTGDHLTSILSPSGISSWAKSFRNPQPPEAAENDSKAGNAGMSAIARFSSGFGLRMPSMSPVRDDTAADTKAAAQSDVFKSITKGLVDTSQNAVKAMQVKARHIVSQNKRRYQEGEFDLDMTYITENIIGMGFPAGHMSSGLFGFIEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVAHFPFDDHNCPPIHLIKSFCLSAYAWLKEDIENVVVVHCKAGMARTGLMICSLLLFLKFFHTSAEAIDYYNQKRCVDGKALVLPSQIRYVKYFERILIHFNGNTPPGRRCMLRGFRLHKCPYWVRPSITISNHSASAFYRDVIGRLCIYLTHACKHLFSFTDYFDNAKLASYVSTIPCRDFVLNKKASKDKGFDGKPEDFWIRAPKKGFVVFALPGEPGLTELSGDFKIHFHDRHGDFYCWLNTTMTENKVLLSDTDLDGFDKRKLPTPGFQVEVVMIDYNGTLPTRSKTNSAGKGSDCRPIHDRVPGHEAAQSSKNKIPESEENDDVFSDSDEENGDTKTGLAQSTSETAKVDHSSTAISSDKIGSLARETNHLSLGNERNLQINAPKEPNIGGMIQPSGLETPNMDSASASEFKAIAADASVFTFGDEEDFDSE | 650 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 5169575 | 5176098 | + | Cp4.1LG19g11020.1 | Cpe19g00640 | 486048 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe19g00640 | 650 | MobiDBLite | consensus disorder prediction | 497 | 623 | - | - | |
Cpe19g00640 | 650 | MobiDBLite | consensus disorder prediction | 553 | 600 | - | - | |
Cpe19g00640 | 650 | MobiDBLite | consensus disorder prediction | 512 | 539 | - | - | |
Cpe19g00640 | 650 | ProSiteProfiles | C2 tensin-type domain profile. | 321 | 494 | IPR014020 | - | |
Cpe19g00640 | 650 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 249 | 288 | IPR000387 | GO:0016311|GO:0016791 | |
Cpe19g00640 | 650 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
Cpe19g00640 | 650 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 143 | 311 | IPR029021 | - | |
Cpe19g00640 | 650 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 135 | 314 | IPR029023 | - | |
Cpe19g00640 | 650 | CDD | PTP_PTEN | 145 | 310 | IPR045101 | GO:0016791 | |
Cpe19g00640 | 650 | PANTHER | PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2B | 5 | 352 | - | - | |
Cpe19g00640 | 650 | PANTHER | PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2B | 400 | 650 | - | - | |
Cpe19g00640 | 650 | MobiDBLite | consensus disorder prediction | 1 | 63 | - | - | |
Cpe19g00640 | 650 | SMART | PTEN_C2_2 | 319 | 493 | IPR014020 | - | |
Cpe19g00640 | 650 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 400 | 650 | - | - | |
Cpe19g00640 | 650 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 5 | 352 | - | - | |
Cpe19g00640 | 650 | Gene3D | Protein tyrosine phosphatase superfamily | 120 | 317 | IPR029021 | - | |
Cpe19g00640 | 650 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 251 | 261 | IPR016130 | GO:0016311|GO:0016791 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g00171 | Cpe-Chr4:1679284 | Cpe19g00640 | Cpe-Chr19:5169575 | 9.07E-44 | dispersed | |
Cpe15g00475 | Cpe-Chr15:5747188 | Cpe19g00640 | Cpe-Chr19:5169575 | 0 | wgd | |
Cpe19g00640 | Cpe-Chr19:5169575 | Cpe04g00296 | Cpe-Chr4:3737062 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe19g00640 | K01110 | - | csv:101213277 | 987.638 |