Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe19g00675 | ATGGAGAGGTTTTTGGACGAGAATTTTGGAGGTGTCAAACCCAAAAACTCGTCTGACGAGGTGCTCCAGAAGTGGAGGGATCTTTGTGGAGTGGTTAAGAACCCTAAAAGGAGGTTTCGCTTTACCGCCAATCTCTCCAAGCGTGGCGAAGCTGCTGCTATGCGCCAGAGTAATCAGGAGAAGTTGAGGGTCGCAGTTTTAGTCTCAAAAGCTGCATTTCAATTCATCCAAGGTATGCAACCAAGTGATTATAATGTTCCGGAGGATGTCAAAGCTGCAGGTTTCCATATTTGTGCTGATGAACTCGGGGCAATTGTTGAAGGCCATGATCCAAAGAAGTTAAAACATCATGGTGGTGTTGAAGGAATTGCTCAGAAGCTCTGTACATCAACAACAACTGGGCTTAATGGTGATGCTGATGCACTCAACCGTAGGCAAGAGATTTATGGAGTTAATAAATTTGCTGAGAGTGAACAGAGGAGTTTCTTAGTGTTCGTTTGGGAGGCACTCCAAGATATGACTCTCATGATCCTTGGACTCTGTGCCTTCGTCTCTTTGGTAGTTGGCATAATAACTGAAGGATGGCCGCATGGGGCTCATGATGGCCTTGGAATTGTTGCCAGTATCTTGTTAGTTGTATTTGTGACAGCAACTAGTGATTATCGACAATCCTTGCAGTTCAAGGACTTGGATAAGGAGAAAAAGAAGATATCAATTCAGGTTACAAGGAATGATTATAGACAGAAAATGTCAATTTATGATTTGCTTCCTGGAGATATTGTACACCTGTCTCTTGGGGACCAAGTTCCTGCAGATGGACTATTTGTTTCAGGGTTTTCTGTGTTGATTGATGAGTCAAGTTTGACTGGAGAAAGTGAGCCAGTGATGGTGAGTGCAGAAAGCCCTTTTCTTTTATCAGGAACTAAAGTTCAAGATGGATCCTGCAAGATGATGATCACTACTGTTGGGATGAGAACCCAATGGGGTAAGTTGATGGCCACTCTTAGTGAAGGTGGAGATGATGAAACTCCATTGCAGGTGAAATTGAATGGAGTGGCAACAATTATTGGGAAAATAGGTCTTTTCTTTGCCATCATCACATTCTCTGTGTTGGTTCAAGGATTGGTTAGCCAGAAACTTCGAGAAGGGACTCACTGGAACTGGTCAGGAGATGACGCATTAGAGATATTGGAATTCTTTGCTGTTGCCGTCACAATTGTTGTTGTTGCTGTGCCAGAGGGGCTTCCTTTGGCTGTGACATTAAGCCTTGCCTTTGCCATGAAGAAAATGATGAATGATAAAGCACTTGTCCGTCACCTTGCAGCTTGTGAAACTATGGGTTCTGCCACAACTATTTGTAGTGACAAAACTGGAACAATCACTACAAATCACATGACAGTGGTCAAATCATGCATTTGCATGAATGTCAAAGAATCAAGTAACAATCCATCAAGCTTCTGCTCTGACCTTCCAACCTCCGTTGTCAAGCTTCTGCTACAATCAATATTCAACAACACTGGGGGAGAAGTTGTAATCAACAAAAATGGCAAACGTGAGTTGTTGGGCACTCCCACTGAGACTGCATTATTAGAGTTTGGTCTTTCACTCGGTGGTGATTTTCAGGCTGAGAGACAGGCAGGTAAACTTATTAAAGTTGAGCCATTCAATTCTTTGAAAAAGCGGATGGGTGTTGTCCTACAATTTCCTGAAGGTGGTTTCCGAGCTCACACTAAAGGTGCTTCAGAAATAGTGTTGGCTGCCTGTGACAAGGTGATCAACTCGAGTGGTGAGGTTGTTCCTTTAGATGAAACTTCCACCAAACATCTCAATGTTATTATCGATCAATTTGCTGGTGAGGCTCTCCGAACACTTTGCCTTGCCTATATGGAACTGGAAAATGGATTCTCTGTCAATGATCCTATTCCCGTTTCTGGTTATACCTGCATTGGTATTGTGGGTATTAAAGATCCTGTTCGTCCTGGTGTTAAGGAGTCTGTTGCAGTTTGTCGTTCAGCTGGTATTACTGTACGAATGGTTACTGGCGACAATATTAATACTGCAAAAGCTATTGCTAAGGAATGTGGAATCCTCACCGATGATGGCATAGCCATTGAGGGTCCGGATTTCAGAGAGAAGACGCAAGAGGAATTGCTTAAAATTATTCCCAAAATTCAGGTGATGGCTCGATCCTCACCTCTAGATAAGCACACTCTGGTCAAGCATTTGCGGACCACCTTTGATGAAGTTGTTGCAGTCGCCAAAGAGAGTGCTGATGTGATCATTCTTGATGATAATTTCTCTACTATCGTGACTGTGGGAAAATGGGGTCGTTCTGTTTACATAAATATTCAAAAATTCGTGCAATTCCAGCTGACTGTCAACATTGTGGCGTTGATTGTGAACTTCTCTTCAGCTTGTTTGACAGGTAATGCACCCCTTACTGCAGTCCAGCTGTTGTGGGTGAACATGATTATGGACACACTTGGAGCTTTGGCTCTCGCCACTGAGCCTCCGAATGATGAGTTGATGAAGCGCTTACCCGTTGGAAGGAGAGGAAGTTTTATCAGCAATGTCATGTGGAGAAATATCTTGGGGCAGTCCGTGTATCAGCTCTCAGTGATATGGTTTTTACAGGCTAAAGGGAAAGAAGCGTTTGATCTAGACAGCACAGATTCTGATCAGATACTGAATACCCTCATCTTCAATTCCTTTGTGTTCTGTCAGATTTTTAACGAAATAAGTTCCAGGGAGATGGACAAAATCGATGTCTTTCGAGGCATACTTAATAACTATGTATTCGTTGCTGTCATTGGTTCAACCGTTCTGTTCCAAATACTAATCATCGAATTTTTGGGAACATTTGCAAGCACAACCCCTCTGACTTCATCGGAGTGGCTGTTTAGCGTGGTGGTTGGATTTCTAGGCATGCCCATTGCTGCTTTCTTGAAGACTATTCCAGTATAA | 2964 | 43.05 | MERFLDENFGGVKPKNSSDEVLQKWRDLCGVVKNPKRRFRFTANLSKRGEAAAMRQSNQEKLRVAVLVSKAAFQFIQGMQPSDYNVPEDVKAAGFHICADELGAIVEGHDPKKLKHHGGVEGIAQKLCTSTTTGLNGDADALNRRQEIYGVNKFAESEQRSFLVFVWEALQDMTLMILGLCAFVSLVVGIITEGWPHGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRNDYRQKMSIYDLLPGDIVHLSLGDQVPADGLFVSGFSVLIDESSLTGESEPVMVSAESPFLLSGTKVQDGSCKMMITTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAIITFSVLVQGLVSQKLREGTHWNWSGDDALEILEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTITTNHMTVVKSCICMNVKESSNNPSSFCSDLPTSVVKLLLQSIFNNTGGEVVINKNGKRELLGTPTETALLEFGLSLGGDFQAERQAGKLIKVEPFNSLKKRMGVVLQFPEGGFRAHTKGASEIVLAACDKVINSSGEVVPLDETSTKHLNVIIDQFAGEALRTLCLAYMELENGFSVNDPIPVSGYTCIGIVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNINTAKAIAKECGILTDDGIAIEGPDFREKTQEELLKIIPKIQVMARSSPLDKHTLVKHLRTTFDEVVAVAKESADVIILDDNFSTIVTVGKWGRSVYINIQKFVQFQLTVNIVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRLPVGRRGSFISNVMWRNILGQSVYQLSVIWFLQAKGKEAFDLDSTDSDQILNTLIFNSFVFCQIFNEISSREMDKIDVFRGILNNYVFVAVIGSTVLFQILIIEFLGTFASTTPLTSSEWLFSVVVGFLGMPIAAFLKTIPV | 987 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 5367407 | 5371829 | + | Cp4.1LG19g10650.1 | Cpe19g00675 | 486083 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe19g00675 | 987 | PANTHER | CALCIUM-TRANSPORTING ATPASE 1 | 5 | 752 | - | - | |
Cpe19g00675 | 987 | Gene3D | - | 168 | 449 | - | - | |
Cpe19g00675 | 987 | PANTHER | CATION TRANSPORTING ATPASE | 752 | 986 | - | - | |
Cpe19g00675 | 987 | Gene3D | - | 751 | 986 | - | - | |
Cpe19g00675 | 987 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 455 | 461 | IPR018303 | - | |
Cpe19g00675 | 987 | TIGRFAM | ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type | 110 | 752 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
Cpe19g00675 | 987 | Pfam | Cation transport ATPase (P-type) | 513 | 591 | - | - | |
Cpe19g00675 | 987 | PANTHER | CATION TRANSPORTING ATPASE | 5 | 752 | - | - | |
Cpe19g00675 | 987 | Gene3D | - | 140 | 336 | - | - | |
Cpe19g00675 | 987 | SUPERFAMILY | HAD-like | 646 | 772 | IPR036412 | - | |
Cpe19g00675 | 987 | SUPERFAMILY | Calcium ATPase, transduction domain A | 239 | 333 | IPR008250 | - | |
Cpe19g00675 | 987 | Gene3D | - | 463 | 657 | IPR023299 | GO:0000166 | |
Cpe19g00675 | 987 | PRINTS | P-type cation-transporting ATPase superfamily signature | 672 | 682 | - | - | |
Cpe19g00675 | 987 | PRINTS | P-type cation-transporting ATPase superfamily signature | 453 | 467 | - | - | |
Cpe19g00675 | 987 | PRINTS | P-type cation-transporting ATPase superfamily signature | 284 | 298 | - | - | |
Cpe19g00675 | 987 | PRINTS | P-type cation-transporting ATPase superfamily signature | 650 | 661 | - | - | |
Cpe19g00675 | 987 | PRINTS | P-type cation-transporting ATPase superfamily signature | 750 | 762 | - | - | |
Cpe19g00675 | 987 | Pfam | Cation transporter/ATPase, N-terminus | 116 | 185 | IPR004014 | - | |
Cpe19g00675 | 987 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 116 | 986 | IPR023298 | - | |
Cpe19g00675 | 987 | Gene3D | - | 450 | 750 | IPR023214 | - | |
Cpe19g00675 | 987 | PRINTS | Sodium/potassium-transporting ATPase signature | 446 | 467 | - | - | |
Cpe19g00675 | 987 | PRINTS | Sodium/potassium-transporting ATPase signature | 575 | 593 | - | - | |
Cpe19g00675 | 987 | PRINTS | Sodium/potassium-transporting ATPase signature | 203 | 223 | - | - | |
Cpe19g00675 | 987 | Gene3D | - | 17 | 77 | - | - | |
Cpe19g00675 | 987 | Pfam | Cation transporting ATPase, C-terminus | 811 | 984 | IPR006068 | - | |
Cpe19g00675 | 987 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 5 | 49 | IPR024750 | GO:0005516 | |
Cpe19g00675 | 987 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 545 | 698 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cpe19g00675 | 987 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 394 | 479 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cpe19g00675 | 987 | Pfam | E1-E2 ATPase | 237 | 431 | - | - | |
Cpe19g00675 | 987 | SMART | Cation_ATPase_N_a_2 | 114 | 190 | IPR004014 | - | |
Cpe19g00675 | 987 | PANTHER | CALCIUM-TRANSPORTING ATPASE 1 | 752 | 986 | - | - | |
Cpe19g00675 | 987 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 459 | 662 | IPR023299 | GO:0000166 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe13g00519 | Cpe-Chr13:5307701 | Cpe19g00675 | Cpe-Chr19:5367407 | 0 | dispersed | |
Cpe17g00875 | Cpe-Chr17:6800597 | Cpe19g00675 | Cpe-Chr19:5367407 | 0 | dispersed | |
Cpe20g00800 | Cpe-Chr20:7185035 | Cpe19g00675 | Cpe-Chr19:5367407 | 2.87E-06 | dispersed | |
Cpe19g00675 | Cpe-Chr19:5367407 | Cpe02g00220 | Cpe-Chr2:1131171 | 0 | wgd | |
Cpe19g00675 | Cpe-Chr19:5367407 | Cpe06g00200 | Cpe-Chr6:1073086 | 8.07E-20 | wgd | |
Cpe19g00675 | Cpe-Chr19:5367407 | Cpe07g00522 | Cpe-Chr7:3438647 | 6.30E-63 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe19g00675 | K01537 | - | csv:101212315 | 1790.78 |