Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00795 ATGCTGAAGTGCTTATTTGTCATAGCTTCCTTGGTCCTCTCCTCCGCTTTTGCACAGAAACAGAGCCCTCTAAAAGATCCAAATGAGGAATGGCACACGTTGACAGGGGAAGAGCCTATAGTGGTAGCAAGGGGTGGGTTTTCTGGAGTGTTTCCTGAATCGAGCGCGCTTGCAAATGAAGTAGCGGTGTCTAATGGTTTACCGAACACTGTTTTGTACTGCAACCTCCAACTAACCAAAGATGGGCTTGCTATTTGCTTATCTGATATTCTGCTTGAAAACTCAACCAACATTGAACAAGTCTTCCCTAAATCTCGTAAGACTTACGAAATCAATGGAAAGGTTTACAAAGGATGGTTTTCTGTTGATTTCATGTCTGATATTCTCTTTACCAAAGTCGCCTTGGTTCAAGGTATCATGTCCCGCCCTAGTGTGTATGATGGTGTTTGGCCAATTTCTGCTGTTGACGATATCTTAGGACTGAAACGACCTGTTTGGTTGAACGCTGAGTGGGAAACATTCTACCAAGAACACAATCTGAGTATCATATCATTCGTTAAGAAGGCATTGAGACTGATGCCCATAGACTTTGTGTCATCTTCCGAAATTGGAATAGTGAAAGGGCTAGGTGGGGCTGTGGACAGCGCCAAAACAAGGCTCATCTTTCGGTTCTTAGGAGCCACTGAAACAGAGCCAACAACAGGAAAACAATACGGTGACTTGCTTCATGAGCTGGCCATGATAAAGACGATTGCCTCGGGAATCGCGGTCCCAAAATCATACATTTGGCCAGTTAGTCGAGAAGAGTATGTGCTGCCTGCAACAACTGTTGTGATGGATGCCCATAATCTTGGCTTGGAAGTCTATGCTCATGGCTTTGCAAACGATGCCGTTGTTGGTTACAATTATAGTTATGATCCTGTCCGTGAGTACCTTCCGTTTATTGATAATGGCAAATTTGCTGTTGATGGTTTGATTACTGATTACATTCCTACTGCTTCTGAAGCCATTGTCAGACAAGAACCGTTGGTGATAAGCAGCAATGGGGCAAGTGGGGATTACCCAGGGTCAACAGACCTTGCATACGAAGCAGCAATTGAGGATGGGAGTGACGTAATTGATTGTTCAGTACAAATATCAAAAGATGGAGTTCCTTTCTGCATGGAAACCAGTGATCTTTTGCCAACTACCACTGCTATCACTGCTTTCAATGATAAAACTACGGCTGTTCCAGAACTTCAACAAGATCCTGGAATCTTCTCTTTTGATCTCACTTGGCCTCAGATTCTAACATTGAAACCTCAAATCACTAACCCTTTCCTGAGCTCTTCTGGGCTTGTCCGAAATCCTGCCTTTAAGAACAAGGGCAAATTCATGTCCCTCTCTGACTTTCTCGAGTTCGCCAAAGCCAGAGGTGTTCGTGGGATCATGATCAACCTCCAAAATGCGGCCTTCTTGGCTGCAAAGAAAGGTCTTGACATGGTGGGAATCGTATCGACGACAATGAGCGACGCGCATATGGAGAAGGAATCAACACTAGATGTTTATATAAGGTCGGATGACACTTCTGTGTTGACCGCTTTCAAAACCAATTTCCCAACTTTCATAAGAGTTTTAACTGTTGATGGCAAGTATGGGGAAGTCCCCAAAAAGGTCGCTGACGAGATCAAAATCTATGCTGACGCTGTTGCCGTTCCTCGTTCCGCCCTAGTCGAAATCACCAACTATTTTACGGTTAGGAACACGGGTGTGGTTGCTCAATTGAAGTCCGCCGATCTTTCCGTTTTCGTTTATGTCATAAGGAATGAATACGTATCTTTAGCGTTTGATTACTACTCCCAAGCCTCTCTCGAAATCTCCACATACGTCGACTTCTTCCACGTTGACGGCGTCATCACTGACTTCCCTTATACTGCAAAACGATATATAACATGTCCGTGTCGGCCAGTTAACACGGATAGCAGTGGATATTCAATCTTACCGCCAGAAGTTGGAACACTCCTTGGTCTGGTGCCGCAAGAGGTACAACCACGTGTGGATCCTCCCTCGCCTCCATTGGATGTAAAAGCTATCGTCGACCCACCGCTACCGCCGGTGAGCAATGTGTCGACCACCGGCCCTTCAGTCCCTGCCACTGCCGACGCTGTACCAAATATTTCTAACTTCTTCCTATCTTTGCTCTCAGTTGTGGTACTCACCTTCCATGCTCACTCTATACTGTAA 2223 45.3 MLKCLFVIASLVLSSAFAQKQSPLKDPNEEWHTLTGEEPIVVARGGFSGVFPESSALANEVAVSNGLPNTVLYCNLQLTKDGLAICLSDILLENSTNIEQVFPKSRKTYEINGKVYKGWFSVDFMSDILFTKVALVQGIMSRPSVYDGVWPISAVDDILGLKRPVWLNAEWETFYQEHNLSIISFVKKALRLMPIDFVSSSEIGIVKGLGGAVDSAKTRLIFRFLGATETEPTTGKQYGDLLHELAMIKTIASGIAVPKSYIWPVSREEYVLPATTVVMDAHNLGLEVYAHGFANDAVVGYNYSYDPVREYLPFIDNGKFAVDGLITDYIPTASEAIVRQEPLVISSNGASGDYPGSTDLAYEAAIEDGSDVIDCSVQISKDGVPFCMETSDLLPTTTAITAFNDKTTAVPELQQDPGIFSFDLTWPQILTLKPQITNPFLSSSGLVRNPAFKNKGKFMSLSDFLEFAKARGVRGIMINLQNAAFLAAKKGLDMVGIVSTTMSDAHMEKESTLDVYIRSDDTSVLTAFKTNFPTFIRVLTVDGKYGEVPKKVADEIKIYADAVAVPRSALVEITNYFTVRNTGVVAQLKSADLSVFVYVIRNEYVSLAFDYYSQASLEISTYVDFFHVDGVITDFPYTAKRYITCPCRPVNTDSSGYSILPPEVGTLLGLVPQEVQPRVDPPSPPLDVKAIVDPPLPPVSNVSTTGPSVPATADAVPNISNFFLSLLSVVVLTFHAHSIL 740
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6004124 6007646 - Cp4.1LG19g09390.1 Cpe19g00795 486203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00795 740 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 1 734 - -
Cpe19g00795 740 ProSiteProfiles GP-PDE domain profile. 39 337 IPR030395 GO:0006629|GO:0008081
Cpe19g00795 740 Pfam Glycerophosphoryl diester phosphodiesterase family 348 636 IPR030395 GO:0006629|GO:0008081
Cpe19g00795 740 ProSiteProfiles GP-PDE domain profile. 342 643 IPR030395 GO:0006629|GO:0008081
Cpe19g00795 740 SUPERFAMILY PLC-like phosphodiesterases 341 643 IPR017946 GO:0006629|GO:0008081
Cpe19g00795 740 SUPERFAMILY PLC-like phosphodiesterases 39 336 IPR017946 GO:0006629|GO:0008081
Cpe19g00795 740 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL6-RELATED 1 734 - -
Cpe19g00795 740 Gene3D Phosphatidylinositol (PI) phosphodiesterase 340 644 IPR017946 GO:0006629|GO:0008081
Cpe19g00795 740 Gene3D Phosphatidylinositol (PI) phosphodiesterase 37 337 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00801 Cpe-Chr2:5128672 Cpe19g00795 Cpe-Chr19:6004124 1.71E-172 dispersed
Cpe19g00795 Cpe-Chr19:6004124 Cpe20g00074 Cpe-Chr20:397442 8.63E-15 dispersed
Cpe10g00591 Cpe-Chr10:3464534 Cpe19g00795 Cpe-Chr19:6004124 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00795 - - csv:101216172 970.689