Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00799 ATGGGGACAGGAGAAGAGGGCACGCCTTCTAAAACTTCCAAACCTCCCTCTTCATCTCAGGAAATACCCCCGACGCCTTCATATCCTGATTGGTCAAGCTCAATGCAGGCTTACTATGGCGCTGGTGCTACTCCTCCTCCTTTCTTTGCATCTACTGTTGCTTCTCCAACTCCCCACCCTTACCTTTGGGGAAGTCAGCATCCTTTGATGCCACCTTATGGAACTCCAGTACCTTATCCAGCTATGTATCCTCCTGGGGGAGTTTATGCACATCCCAATATCACTGTGCCTCCCGGCTCTGCCCCAATTAATGCGGAATATGAAGGAAAATCTCCTGATGGAAAAGAAAGGGCGTCCAAGAAATCCAAGGGTACATCGGGAAATACTGGTTCAGGTGGCGGTAGGACCGGGGAGAGAGGAAAGGTGGCTTCAAGTTCTGGAAATGATGGTGCATCTCAAAGTGAAAGTGGTACTGAGGGCTCATCAGAAGGCAGTGATGAGAATGCTAACCAACAGGAATTTGCTGCGAATAAGAAGGGCAGCTTCAACCAGATGCTGGCTGATGGAGCCAATGCACAAAGTAACACGGGTGGACCAAATTCCAAATCTTCAGTGACTGGGAAACCCATCACTTCCATTCCTGCAACTAATCTGAACATGGGAATGGATTTGTGGAATACCACCACTGCTGCCTCAGGGGCTGCAAAAGCAAGAGCAAACGCGGTCTCCTCAGCTATTGTTCCAGCAACGATGATTGGTCGTGACGGTGTGATGCCAGAACAATGGGCTCAAGATGAACGAGAGCTAAAACGACAGAAAAGGAAGCAATCTAACCGAGAGTCTGCTAGGAGGTCAAGATTACGTAAGCAGGCGGAGTGTGAAGAATTACAGGCCAGAGTGCAGACTCTGAACAACGAGAACCGTACTCTCAGGGATGAGCTGCAGAGACTCTCCGAGGAATGTGAAAAGCTAACATCAGAAAATAGTTCCATCAAGGAAGAATTGACACGATTTTGTGGACCGGAGGCATTAGCTAAATTCGAGAAAGGAACTGCTGCTACTCCGGCTGCCCAGTCGTGCGGTGGTGACGAGGGTAACAACTAA 1104 49.18 MGTGEEGTPSKTSKPPSSSQEIPPTPSYPDWSSSMQAYYGAGATPPPFFASTVASPTPHPYLWGSQHPLMPPYGTPVPYPAMYPPGGVYAHPNITVPPGSAPINAEYEGKSPDGKERASKKSKGTSGNTGSGGGRTGERGKVASSSGNDGASQSESGTEGSSEGSDENANQQEFAANKKGSFNQMLADGANAQSNTGGPNSKSSVTGKPITSIPATNLNMGMDLWNTTTAASGAAKARANAVSSAIVPATMIGRDGVMPEQWAQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVQTLNNENRTLRDELQRLSEECEKLTSENSSIKEELTRFCGPEALAKFEKGTAATPAAQSCGGDEGNN 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6026592 6031168 + Cp4.1LG19g09470.1 Cpe19g00799 486207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00799 367 Coils Coil 279 334 - -
Cpe19g00799 367 MobiDBLite consensus disorder prediction 259 291 - -
Cpe19g00799 367 Gene3D - 269 324 - -
Cpe19g00799 367 MobiDBLite consensus disorder prediction 141 219 - -
Cpe19g00799 367 Pfam G-box binding protein MFMR 1 94 IPR012900 -
Cpe19g00799 367 MobiDBLite consensus disorder prediction 1 69 - -
Cpe19g00799 367 SMART brlzneu 266 330 IPR004827 GO:0003700|GO:0006355
Cpe19g00799 367 MobiDBLite consensus disorder prediction 260 275 - -
Cpe19g00799 367 SUPERFAMILY Leucine zipper domain 269 325 IPR046347 GO:0003700|GO:0006355
Cpe19g00799 367 PANTHER G-BOX-BINDING FACTOR 1 1 359 - -
Cpe19g00799 367 MobiDBLite consensus disorder prediction 96 219 - -
Cpe19g00799 367 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 268 331 IPR004827 GO:0003700|GO:0006355
Cpe19g00799 367 CDD bZIP_plant_GBF1 271 321 IPR045314 GO:0003700|GO:0006355
Cpe19g00799 367 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 273 288 IPR004827 GO:0003700|GO:0006355
Cpe19g00799 367 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 359 IPR044827 GO:0003700|GO:0006355|GO:0043565
Cpe19g00799 367 Pfam bZIP transcription factor 266 328 IPR004827 GO:0003700|GO:0006355
Cpe19g00799 367 MobiDBLite consensus disorder prediction 1 39 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00596 Cpe19g00799 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00881 Cpe-Chr8:6961788 Cpe19g00799 Cpe-Chr19:6026592 1.73E-66 dispersed
Cpe14g00989 Cpe-Chr14:8347870 Cpe19g00799 Cpe-Chr19:6026592 4.94E-63 dispersed
Cpe19g00799 Cpe-Chr19:6026592 Cpe09g00249 Cpe-Chr9:1441424 9.63E-13 dispersed
Cpe10g00596 Cpe-Chr10:3491811 Cpe19g00799 Cpe-Chr19:6026592 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51026 PF07777 MFMR 7.90E-33 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00799 K09060 - csv:101217128 606.675