Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00807 ATGGTATTTGGACGGACACGATCTTCTCCCCATATACATCATCCGACGGCGCTCTCGAGGCAGAGTCTCCTCTTTGAATTGACGCGTCACTCTGAACTTGCTCTATGGTCCCCACTTCTTCTTGTCAGCTTCCCCGGATTGAGCGGGTGCCAGTCCATCTCCTCCTCCACGTGGATGCCCATTATCCGATATCCCGATTTCGACTCCGATGAGTGGATGGACAGTCTAATGGCTGGTGGAGATTCAACGGATAGCTCTAATCTTCCTTCTGGTTGCGACGCGTGGCAGGCTAATTCGGATATTGCTCTCTACGGTGATGATCCCTTTGTCCCCTGTCCCAGTCGCCTCACTATCCCCTGTTCTTCACCCTCCGATCTCAACAGAGTCATTTTCCCGGAACCTCCGAGAAATCAAGCTGCCATTCAACCGCCTGTGGTTTCATGGACCGGGCTTACTGCCAAGACTCCACCGGTGGTGGTTAAGGACACTAATGGCTGTTCGTCGAGTTCTGCAGAGAACGAACCGAAACCTCCACTTCTGAAAACCCTAATTGAATGTGCTAGACTTTCCGAATCGGAGCCAAATCGGGCGGCGCAGATATTTATCCAGCTTAAGGAATCGTCATCGGAGCATGGAGATCCGACGGAGAGAGTCGCTTTTTACTTCCTCGAAGCTCTGTACCGGAGATTATCACTTCAAACGGAGAATCGTTTGGTTTGTTCGGAATCCACTTCAGATGATTTCACCATTTCTTACAAAGCTCTCAACGACGCCTGCCCGTACTCTAAATTCGCCCATTTGACTGCGAATCAAGCGATACTCGAAATGACAGAGAACGCGAGCAAGATTCACATAATCGACTTTGGAATTTCTCAGGGAGTTCAATGGGCGGCGCTTCTTCAAGCTCTCGCAACCCGCTCCTCCGGAAAACCAACCGGAATCCGGATCTCCGGCATTCCAGCTCCGATGCTCGGAAACTGCCCAGCCACAGCGCTGTTCGCGACGGGTAATCGACTGGCTGAGTTCGCCAAGCTTCTAGAACTGAACTTCGAATTTGACCGAATCCTCACCCCAATCGAAGAACTGAAAGAATCCTCGTTCCGAATCGACTCCGACGAAACCCTCGCCGTGAATTTCATGCTTCAACTGTACAATCTCCTCGACGAAACTCCTCGCGTCGTTCTGAACGTTTTGCGACTCGCTAAATCACTAAACCCTAGAATCGTAACCCTAGGCGAATACGAAGCCAACCTGAATCGGGTCGGGTTCTTTAACCGGTTCAAGAACGCAGTCCGATACTACTCAGCCGTGTTCGAATCACTGGACCCAAAATTACCTCGCAACTCAAACGAAAGGCTGCAACTGGAAAAGCTCGTACTCGGGCGGCAGATCGGCGACATTGTCGGACCAGAGTCGTCGCCGGGAGCCAAAATCGAACGGATGGAAGACAAAGAACAGTGGAAAATGATGATGGTAAATTGCGGGTTTGAAGCGGTAAATCTCAGCCATTACGCGAAAAGTCAAGCTCAAATCCTTTTATGGAAGTATGATTACAGCTGTGAGTATTCTTTGATCGAATCCTCGCCTGGATTTCTGTCGTTGGCCTGGAATCAAGTCCCGATCATTACAGTTTCTTCCTGGCGTTGA 1647 50.33 MVFGRTRSSPHIHHPTALSRQSLLFELTRHSELALWSPLLLVSFPGLSGCQSISSSTWMPIIRYPDFDSDEWMDSLMAGGDSTDSSNLPSGCDAWQANSDIALYGDDPFVPCPSRLTIPCSSPSDLNRVIFPEPPRNQAAIQPPVVSWTGLTAKTPPVVVKDTNGCSSSSAENEPKPPLLKTLIECARLSESEPNRAAQIFIQLKESSSEHGDPTERVAFYFLEALYRRLSLQTENRLVCSESTSDDFTISYKALNDACPYSKFAHLTANQAILEMTENASKIHIIDFGISQGVQWAALLQALATRSSGKPTGIRISGIPAPMLGNCPATALFATGNRLAEFAKLLELNFEFDRILTPIEELKESSFRIDSDETLAVNFMLQLYNLLDETPRVVLNVLRLAKSLNPRIVTLGEYEANLNRVGFFNRFKNAVRYYSAVFESLDPKLPRNSNERLQLEKLVLGRQIGDIVGPESSPGAKIERMEDKEQWKMMMVNCGFEAVNLSHYAKSQAQILLWKYDYSCEYSLIESSPGFLSLAWNQVPIITVSSWR 548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6062922 6065307 + Cp4.1LG19g09550.1 Cpe19g00807 486215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00807 548 ProSiteProfiles GRAS family profile. 170 548 IPR005202 -
Cpe19g00807 548 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 180 547 IPR005202 -
Cpe19g00807 548 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 180 547 - -
Cpe19g00807 548 Pfam GRAS domain family 180 548 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe14g00561 Cpe19g00807 CCT
Cpe10g00605 Cpe19g00807 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00561 Cpe-Chr14:3562009 Cpe19g00807 Cpe-Chr19:6062922 0 dispersed
Cpe19g00807 Cpe-Chr19:6062922 Cpe05g01400 Cpe-Chr5:9850883 6.48E-63 dispersed
Cpe01g00711 Cpe-Chr1:4141245 Cpe19g00807 Cpe-Chr19:6062922 0 wgd
Cpe10g00605 Cpe-Chr10:3534018 Cpe19g00807 Cpe-Chr19:6062922 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51029 PF03514 GRAS 3.50E-111 CL0063 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00807 - - cmos:111453531 823.928