Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00830 ATGGCGCGGGAGAATGATGATCATGATGAGTACGGCAGCGTGTTTAAAACCAACATTTTGGGGACACCCATCATAGTGTCCACTGATTCAGACGTGAACAAGGTGGTCTTACAGAACCATGGCAACACCTTTGTTCCAGCTTACCCCAAATCAATCACTGAATTACTTGGTTCTTTTTCAATCCTTCAAATGAATGGCAATTTCCAAAAGAGAATTCATTCAATCATTGGAGCTTTCTTGAAGTCCCCCAGCCTCAAAGCCCGAATCACTACAGATATTCAAAACACTGTTAAACTAAGGCTTTCCAATTGGAATACCTCCAAATTGGTTTATGTCCAAACTGAAACCAAACAGATCACATTTGAAGTATTGGTGAAGGTGTTGATGAGTGTGGGACCCGGTGAAGATTTGAAGATTTTGAAAAGGGAATTCGAAGAGTTTATCAAAGCCTTGATTTGTATACCTGTTAAACTACCTGGAACGAGGCTATATAAATCCTTGAAGGCGAGAGAGAAGCTGTTGAAAATAGTGAGTAAAATTGTGGAAGAGAGAAGATCGACGGCGGCGGCGGCGGAGGAGGAGGAGGAGAAGGTTCCACCGAGAGATGCGGTGGACGTTCTCTTACAGGATAACGATGTGGTCCAAGGGCTGCCGTTGGATTTCATCAGTAGTCACATCATTGAGCTGATGATCCCCGGCGAGGAGACGGTGCCGATGGCGATGACTCTCGCCGTCAAATTTCTTAGTGACTGTCCCGTCGCTCTAGCTCAAATGATGGAGGAGAATATGGAGCTGAAGAAGCAGAAGGATGATTCCGGGGAGGAGTACACGTGGACAGATTACATGTCTCTGTTATTTACTCAAAATGTGATTAGTGAAACCTTAAGAATGGCTAATATCATCAATGGGGTTTGGAGGAAAGCTCAAAAAGATGTGGAAATTAAAGGGGGACAGAGGCTGTGTCCCGGCATTGAGCTTGCCAGGCTCGAAATCTCAATTTTCCTTCATCATCTTGTCACGACCTACAAATGGGGAGCTGAAAGGGATGAAATCATCCATTTTCCAACAGTGAGGATGAGAAGGAAGCTGCCAATAGCAATTGCAAAACATTAA 1113 44.29 MARENDDHDEYGSVFKTNILGTPIIVSTDSDVNKVVLQNHGNTFVPAYPKSITELLGSFSILQMNGNFQKRIHSIIGAFLKSPSLKARITTDIQNTVKLRLSNWNTSKLVYVQTETKQITFEVLVKVLMSVGPGEDLKILKREFEEFIKALICIPVKLPGTRLYKSLKAREKLLKIVSKIVEERRSTAAAAEEEEEKVPPRDAVDVLLQDNDVVQGLPLDFISSHIIELMIPGEETVPMAMTLAVKFLSDCPVALAQMMEENMELKKQKDDSGEEYTWTDYMSLLFTQNVISETLRMANIINGVWRKAQKDVEIKGGQRLCPGIELARLEISIFLHHLVTTYKWGAERDEIIHFPTVRMRRKLPIAIAKH 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6188942 6194366 + Cp4.1LG19g09150.1 Cpe19g00830 486238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00830 370 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90C1 316 367 - -
Cpe19g00830 370 PANTHER CYTOCHROME P450 26 9 316 - -
Cpe19g00830 370 PANTHER CYTOCHROME P450 26 316 367 - -
Cpe19g00830 370 Coils Coil 255 275 - -
Cpe19g00830 370 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90C1 9 316 - -
Cpe19g00830 370 SUPERFAMILY Cytochrome P450 8 365 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe19g00830 370 Pfam Cytochrome P450 8 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe19g00830 370 Gene3D Cytochrome P450 2 316 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe19g00830 370 Gene3D Cytochrome P450 317 369 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe19g00830 370 PRINTS E-class P450 group I signature 221 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe19g00830 370 PRINTS E-class P450 group I signature 8 27 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe19g00830 370 PRINTS E-class P450 group I signature 321 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01072 Cpe-Chr3:8866961 Cpe19g00830 Cpe-Chr19:6188942 3.16E-79 dispersed
Cpe19g00830 Cpe-Chr19:6188942 Cpe01g01044 Cpe-Chr1:6174460 4.36E-78 dispersed
Cpe19g00830 Cpe-Chr19:6188942 Cpe12g00626 Cpe-Chr12:6167313 1.65E-116 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00830 K12637 - csv:101203911 540.421