Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00876 ATGGCTTCCTTTGCTGTGGCATTCTCACACTTTGCAATTCTTTTGCTGTCTGCTGTGTCGTTGGGGAGTTCGCTGAGCTTAGACTACTACGACAAGACGTGTCCCAGTGCCGACTTCATTGTTACTAAAGCTGTCAGGAATGCAGCTTACAAAGATAAGACTGTCCCTGCTGCACTCCTCCGAATGCACTTTCATGACTGCTTTATAAGGGGTTGTGATGCATCTGTATTGCTGAACTCAGTAGGGAACAACAAAGCAGAGAAAGATGGGCCAGCTAATTTGTCTTTGCACTCGTTTTTTGTGATAGACGACGCGAAGAAAGAACTAGAATCCTATTGCCCTGGCGTTGTCTCTTGTGCTGATATCTTAGCTATGGCTGCAAGGGATGCAGTTGTGCTTTCTGGAGGTCCAACATGGGATGTTCCTAAAGGAAGAAAGGATGGAAGGACATCAAAGGCAAGTGAAACAATACAATTGCCATCTCCAGCCTTCAACATTTCTCAGCTGCAACAGAGCTTCTCCCAAAGGGGACTATCCTTGGACGACCTCGTTGCTCTGTCAGGAGCACACACCTTAGGATTTGCTCATTGCTCATCCTTTGAAGGTAGAATCCGCAACTTCAGTCCAGCCAGCAATGTTGACCCTGCAATGAATCCATCGTTTGCAGGAAGTCTAAGAAACATGTGCCCAGTAAACAACAAGGCAAAAAATGCGGGCGCTAACATGGATACTTCTCCGACCACATTCGACAACAATTACTATAGACTGATACTACAAAAGAAGGGCCTGTTTTCTGCTGATCAAGCTCTGCTCAACTTTCCCAAGACCAAGAATCTTGTTAATGAGTTTGCTAGCTCAAAGGAAGCTTTTAACCGAGCATTTGTTAATTCCATGATCAAGATGAGTAGCATCACTGGAGGACAGGAGATCAGAAAGAATTGTAGGGCAGTGAACTAA 957 45.14 MASFAVAFSHFAILLLSAVSLGSSLSLDYYDKTCPSADFIVTKAVRNAAYKDKTVPAALLRMHFHDCFIRGCDASVLLNSVGNNKAEKDGPANLSLHSFFVIDDAKKELESYCPGVVSCADILAMAARDAVVLSGGPTWDVPKGRKDGRTSKASETIQLPSPAFNISQLQQSFSQRGLSLDDLVALSGAHTLGFAHCSSFEGRIRNFSPASNVDPAMNPSFAGSLRNMCPVNNKAKNAGANMDTSPTTFDNNYYRLILQKKGLFSADQALLNFPKTKNLVNEFASSKEAFNRAFVNSMIKMSSITGGQEIRKNCRAVN 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6426026 6427953 - Cp4.1LG19g08660.1 Cpe19g00876 486284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00876 318 Gene3D - 28 318 - -
Cpe19g00876 318 CDD secretory_peroxidase 25 317 IPR033905 GO:0004601|GO:0042744
Cpe19g00876 318 SUPERFAMILY Heme-dependent peroxidases 25 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cpe19g00876 318 Pfam Peroxidase 42 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe19g00876 318 Gene3D Peroxidase, domain 2 160 301 - -
Cpe19g00876 318 PANTHER PEROXIDASE 10 317 - -
Cpe19g00876 318 ProSiteProfiles Plant heme peroxidase family profile. 24 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe19g00876 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Cpe19g00876 318 PANTHER PEROXIDASE 25-RELATED 10 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe19g00876 318 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe19g00876 318 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe19g00876 318 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe19g00876 318 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe19g00876 318 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe19g00876 318 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe19g00876 318 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe19g00876 318 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe19g00876 318 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe19g00876 318 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe19g00876 318 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe19g00876 318 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe19g00876 318 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe19g00876 318 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00280 Cpe-Chr6:1540883 Cpe19g00876 Cpe-Chr19:6426026 2.28E-80 dispersed
Cpe09g00117 Cpe-Chr9:677352 Cpe19g00876 Cpe-Chr19:6426026 8.16E-67 dispersed
Cpe10g00471 Cpe-Chr10:2772231 Cpe19g00876 Cpe-Chr19:6426026 1.92E-67 dispersed
Cpe15g00236 Cpe-Chr15:2140840 Cpe19g00876 Cpe-Chr19:6426026 1.72E-64 dispersed
Cpe17g00102 Cpe-Chr17:634253 Cpe19g00876 Cpe-Chr19:6426026 3.14E-76 dispersed
Cpe17g00723 Cpe-Chr17:5760134 Cpe19g00876 Cpe-Chr19:6426026 4.69E-80 dispersed
Cpe19g00661 Cpe-Chr19:5296903 Cpe19g00876 Cpe-Chr19:6426026 1.52E-80 dispersed
Cpe10g00685 Cpe-Chr10:3937680 Cpe19g00876 Cpe-Chr19:6426026 3.66E-125 wgd
Cpe19g00876 Cpe-Chr19:6426026 Cpe07g00349 Cpe-Chr7:2261224 6.14E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00876 K00430 - csv:101217954 579.711