Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe19g00880 | ATGTTATCCAGCTTGATGAACCTTCTGAGGGCTTGCTGGTTGCCATCCTCGGACAATATCGTACACAGCAATTCGGATTCGGCAGGCCGTCGTGAAGGCCTACTATGGTACAAAGATCTTGGACATCACATGAATGGTGAATTTTCAATGGCTGTTGTCCAGGCTAATAACTTGCTTGAGGATCAGAGCCAGATCGAATCGGGTCCATTGAGCTTGCTCGAATCCGGGCCGTTCGGAACGTTTATTGGTGTCTATGATGGTCATGGTGGACCTGAAGCATCAAATTACATATATGACAATCTTTTCCAGCATTTGAAAAGGTTCACCACAGAACAACAATCAATGTCATCTGATGTGATAAAGAAAGCATTTCAAGCTACAGAGGAAGGGTTTATTTCGTTAGTGGCTAAACAATGGCAGATGAATCCCCAAATTGCAGCTGTTGGTTCATGCTGTCTGGTTGGTGTGATCTGTGGTGGCACCCTTTACATAGCCAATCTTGGCGATTCCCGTGCCGTACTGGGAAGGCTCGTTCAGGCGACCGAGGAGGTCGTTGCTGTTCAGCTATCAGCCGAGCATAATGTGAGCATAGAAGCTGTCAGAAGGGAGATGCAGTCTTTGCACCCAGATGACTCGCATATAGTAGTTTTGAAGCATAATGTATGGCGAGTAAAAGGCTTAATGCAGGTTTCCAGATCTATAGGCGATGCATATCTAAAGAAGGCTGAATTCAACAGGGAGCCCTTGTATTCGAAGTTTAGGCTTCGCGAACCGTTCAATCGGCCAATATTGAGCTGTGAACCATCAATATCGATGCATGAACTTCGACCACAAGATCAATTCATCATATTTGCCTCTGATGGTCTGTGGGAGCACCTTAGCAATCAGCAGGCTGTGGATATTATTCGAACTCACCCACATCATGGAAGTGCTAAGAGATTGGTAAAAGCTGCTATGCAGGATGCAGCTAAGAAGCGAGAAATGCGATATTCAGATTTGAAGGACATCGACCGAGGTATCCGCCGTCATTTTCACGATGACATCACAGTCATAGTTGTATTTCTCGACTCGAATCTCGTGAGCAGAGCAAGCTCGGTCCGAGGCCCGACTACGTCTTTGAGAGGGAGGGGCGTTATCTTACCAAAAAAGTCTCTAGCTCTTTGTGCTCCACCTGCATAA | 1179 | 46.23 | MLSSLMNLLRACWLPSSDNIVHSNSDSAGRREGLLWYKDLGHHMNGEFSMAVVQANNLLEDQSQIESGPLSLLESGPFGTFIGVYDGHGGPEASNYIYDNLFQHLKRFTTEQQSMSSDVIKKAFQATEEGFISLVAKQWQMNPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRLVQATEEVVAVQLSAEHNVSIEAVRREMQSLHPDDSHIVVLKHNVWRVKGLMQVSRSIGDAYLKKAEFNREPLYSKFRLREPFNRPILSCEPSISMHELRPQDQFIIFASDGLWEHLSNQQAVDIIRTHPHHGSAKRLVKAAMQDAAKKREMRYSDLKDIDRGIRRHFHDDITVIVVFLDSNLVSRASSVRGPTTSLRGRGVILPKKSLALCAPPA | 392 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 6451702 | 6454263 | + | Cp4.1LG19g08750.1 | Cpe19g00880 | 486288 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe19g00880 | 392 | ProSitePatterns | PPM-type phosphatase domain signature. | 81 | 89 | IPR000222 | GO:0043169 | |
Cpe19g00880 | 392 | PANTHER | ALPHABET, ISOFORM E-RELATED | 6 | 384 | - | - | |
Cpe19g00880 | 392 | ProSiteProfiles | PPM-type phosphatase domain profile. | 47 | 355 | IPR001932 | - | |
Cpe19g00880 | 392 | Pfam | Protein phosphatase 2C | 80 | 325 | IPR001932 | - | |
Cpe19g00880 | 392 | SUPERFAMILY | PP2C-like | 56 | 356 | IPR036457 | - | |
Cpe19g00880 | 392 | Gene3D | - | 37 | 365 | IPR036457 | - | |
Cpe19g00880 | 392 | SMART | PP2C_4 | 41 | 353 | IPR001932 | - | |
Cpe19g00880 | 392 | CDD | PP2Cc | 48 | 355 | IPR001932 | - | |
Cpe19g00880 | 392 | PANTHER | PROTEIN PHOSPHATASE 2C 60-RELATED | 6 | 384 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g00604 | Cpe-Chr4:6319570 | Cpe19g00880 | Cpe-Chr19:6451702 | 1.90E-130 | dispersed | |
Cpe15g00605 | Cpe-Chr15:6773776 | Cpe19g00880 | Cpe-Chr19:6451702 | 3.11E-128 | dispersed | |
Cpe16g00609 | Cpe-Chr16:6698901 | Cpe19g00880 | Cpe-Chr19:6451702 | 1.47E-19 | dispersed | |
Cpe17g00072 | Cpe-Chr17:417449 | Cpe19g00880 | Cpe-Chr19:6451702 | 4.04E-149 | dispersed | |
Cpe19g00351 | Cpe-Chr19:3077215 | Cpe19g00880 | Cpe-Chr19:6451702 | 8.83E-37 | dispersed | |
Cpe10g00688 | Cpe-Chr10:3957063 | Cpe19g00880 | Cpe-Chr19:6451702 | 8.08E-157 | wgd | |
Cpe14g01040 | Cpe-Chr14:8734462 | Cpe19g00880 | Cpe-Chr19:6451702 | 0 | wgd | |
Cpe16g00325 | Cpe-Chr16:5096653 | Cpe19g00880 | Cpe-Chr19:6451702 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe19g00880 | K01102 | - | csv:101219696 | 703.36 |