Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g00909 ATGTTTCCAAGACTTGTGAATCCTGACGGAGATATCCAGATCCATGGCAGCCGTGGTTCTGTTGCTTCCGACCTCACTCATCCCCACAGGGGCGATCCTTGTCTCGTTTTGACTTCAGATCCCAAACCTCGACTCCGATGGACTGCCGATCTTCACGAGCGATTCGTCGATGCTGTCACTCAACTCGGTGGTGCTAACAAAGCTACACCAAAAGCAATAATGCGAACAATGAATGTGAAAGGACTGACTCTCTTCCATTTGAAGAGCCACCTCCAGAAATACAGATTAGGTAAGCAATCAGGGAAGGATATGGGTGAGGCCTCTAAAGATGGTGCATATCTTTTAGAAAGTCCAAGTATCAGTAATTTCTCTCCTGACTTGCCAATTTCTGAAATGACCGATGGTTATGAAGTCAAGGAGGCATTAAGAGCACAAATGGAAGTGCAAAGTAAGTTACATCTGCAAGTCGAGGCAGAGAAGCATCTACGAATTCGTCAGGATGCCGAGCGAAGATATTTGGCGATGCTTGAGAGAGCTTGTAAAATGCTTGCAGATCAATTCATTGGAGGTGCGGTTTCGGACTCGGACAGCAAGAAGTCTCAAGGACTAGATCATAAGAGCCCGAGAAGTTCCTCGATTGACCCACTTGGTTTCTATGCTTCGCAGTCACAGGGGATGGAAAGAGCGAATGGCACAGAAGAATTGCAAGCTAATCCTCCTTACCAAAGGGCTGATTGTTCGACCGAAAGCTGCCTAACCTCGAACGAAAGTCCTGGGGGATTGACTATGGAGAAATCTCCCGTGGCAAGCAAGAAAAACATAGTTAACTTGGATTCAGCAAATGCATCTTTGATTTGGGATGAAGCTAGGGAAGGAATACAAGATGCTAATATCATCCAAATTAATCATCACGGCGTATCTGAGTGCGACATGTGGGGATGA 942 46.07 MFPRLVNPDGDIQIHGSRGSVASDLTHPHRGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSISNFSPDLPISEMTDGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERACKMLADQFIGGAVSDSDSKKSQGLDHKSPRSSSIDPLGFYASQSQGMERANGTEELQANPPYQRADCSTESCLTSNESPGGLTMEKSPVASKKNIVNLDSANASLIWDEAREGIQDANIIQINHHGVSECDMWG 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6603590 6607193 - Cp4.1LG19g08330.1 Cpe19g00909 486317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g00909 313 MobiDBLite consensus disorder prediction 191 217 - -
Cpe19g00909 313 MobiDBLite consensus disorder prediction 238 261 - -
Cpe19g00909 313 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 15 307 - -
Cpe19g00909 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 99 IPR017930 -
Cpe19g00909 313 MobiDBLite consensus disorder prediction 1 26 - -
Cpe19g00909 313 Pfam MYB-CC type transfactor, LHEQLE motif 137 182 IPR025756 -
Cpe19g00909 313 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 15 307 IPR044848 GO:0003700
Cpe19g00909 313 SUPERFAMILY Homeodomain-like 42 98 IPR009057 -
Cpe19g00909 313 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 42 97 IPR006447 GO:0003677
Cpe19g00909 313 Pfam Myb-like DNA-binding domain 45 95 IPR001005 -
Cpe19g00909 313 MobiDBLite consensus disorder prediction 238 265 - -
Cpe19g00909 313 Gene3D - 41 99 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe15g00910 Cpe-Chr15:8713480 Cpe19g00909 Cpe-Chr19:6603590 2.23E-48 dispersed
Cpe19g00909 Cpe-Chr19:6603590 Cpe08g01373 Cpe-Chr8:9861359 1.40E-33 dispersed
Cpe10g00725 Cpe-Chr10:4143111 Cpe19g00909 Cpe-Chr19:6603590 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51041 PF00249 Myb_DNA-binding 4.10E-06 CL0123 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g00909 - - csv:105435941 563.148