Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe19g00971 | ATGATCTCTTCACTCAGCCTCACATCTTCTACTTTCGCTTCCTCTGAACTTCTCAACCGAAAATCTCCGATTCCCAGGCTGAATCTTCCGGCGCAGTTTCCGAATCGGAGTGCCCTCAAACATCTTGATCGATCTCTTTCTACCAAAAAACCACTTCACATCTCATCCGTTGATAATCTTTCTTTGTCCGTAAAATCGTTTGGGCGTTCGACGGAATGCAGGGCGTACGAGGCCGAATCGCGGCGTTTGCCGATCAACGTTGAGCTTCCTGAAGAACAGGCAGCTCAGAAACTCAAAATTGGGCTGTATTTCGCCACTTGGTGGGCTTTGAATGTGGTGTTCAATGTATACAACAAGAAGGTTCTTAATGCGTTCCCTTATCCATGGCTCACCTCCACTCTCTCCCTCGCCGCTGGATCGCTTATGATGCTCGTTTCTTGGGCCACTAGAATGGTCGACGCTCCCAAAACCGATTTGGATTTCTGGAAATCCCTGTTGCCGGTGGCGGTGGCGCATACTATTGGGCATGTTGCAGCAACTGTGAGCATGTCCAAAGTGGCTGTCTCATTCACTCACATAATCAAGAGTGGGGAGCCGGCTTTCAGTGTGTTGGTCTCCAGGTTTCTGCTGGGAGAGATGTTTCCATTGCCTGTTTACTTATCTCTTATCCCTATCATTGGAGGCTGCGCTCTTTCCGCACTAACTGAGCTCAATTTCAACATGACTGGATTCATGGGAGCGATGATATCAAACTTGGCATTTGTGTTTAGAAACATATTCTCAAAGAAAGGGATGAAGGGGAAGTCAGTGAGTGGGATGAATTACTATGCTTGCCTTTCAATGCTGTCTCTGCTCATTCTTATTCCTTTCGCCATTGCTGTGGAGGGACCCAAGTTGTGGGCTGAAGGATTTCAACAGGCTCTCTCTCAAATTGGTCCCAATTTCATTTGGTGGTTGGTAGCTCAAAGTATGTTCTACCACTTGTACAATCAAGTGTCGTACATGTCTCTTGATCAGATATCTCCATTGACATTCAGCGTAGGGAACACAATGAAGAGAATATTCGTAATAGTGTCGTCCATTATCATCTTCCGCACGCCTGTCCGACCCATCAACGCCATTGGAGCTGCCATTGCAATCCTTGGAACCTTCCTCTACTCGCAGGCCAAGCTGTGA | 1176 | 47.28 | MISSLSLTSSTFASSELLNRKSPIPRLNLPAQFPNRSALKHLDRSLSTKKPLHISSVDNLSLSVKSFGRSTECRAYEAESRRLPINVELPEEQAAQKLKIGLYFATWWALNVVFNVYNKKVLNAFPYPWLTSTLSLAAGSLMMLVSWATRMVDAPKTDLDFWKSLLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEMFPLPVYLSLIPIIGGCALSALTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMLSLLILIPFAIAVEGPKLWAEGFQQALSQIGPNFIWWLVAQSMFYHLYNQVSYMSLDQISPLTFSVGNTMKRIFVIVSSIIIFRTPVRPINAIGAAIAILGTFLYSQAKL | 391 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 19 | 6847618 | 6849862 | - | Cp4.1LG19g07750.1 | Cpe19g00971 | 486379 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe19g00971 | 391 | PANTHER | SOLUTE CARRIER FAMILY 35 | 35 | 390 | - | - | |
| Cpe19g00971 | 391 | TIGRFAM | tpt: Tpt phosphate/phosphoenolpyruvate translocator | 98 | 390 | IPR004696 | GO:0016021|GO:0022857|GO:0055085 | |
| Cpe19g00971 | 391 | PANTHER | GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC | 35 | 390 | - | - | |
| Cpe19g00971 | 391 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 283 | 388 | - | - | |
| Cpe19g00971 | 391 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 140 | 235 | - | - | |
| Cpe19g00971 | 391 | Pfam | Triose-phosphate Transporter family | 98 | 387 | IPR004853 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe10g00791 | Cpe19g00971 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe02g00758 | Cpe-Chr2:4846231 | Cpe19g00971 | Cpe-Chr19:6847618 | 0 | dispersed | |
| Cpe08g00468 | Cpe-Chr8:3008989 | Cpe19g00971 | Cpe-Chr19:6847618 | 8.30E-80 | dispersed | |
| Cpe10g00176 | Cpe-Chr10:1037390 | Cpe19g00971 | Cpe-Chr19:6847618 | 3.04E-63 | dispersed | |
| Cpe19g00971 | Cpe-Chr19:6847618 | Cpe19g01035 | Cpe-Chr19:7167860 | 8.29E-77 | dispersed | |
| Cpe10g00791 | Cpe-Chr10:4499191 | Cpe19g00971 | Cpe-Chr19:6847618 | 0 | wgd | |
| Cpe19g00971 | Cpe-Chr19:6847618 | Cpe06g00755 | Cpe-Chr6:4760524 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe19g00971 | K15283 | - | csv:101216621 | 638.647 |