Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe19g01019 | ATGGAGAAGGAGGCTAATTCTTGGCTTAGGAGAACCAAGTTCTCTCACACAGTTTATCATCGATGGGACTCGTTAAGATTGACCCCTGTTCCTTTCACCATCGAACCACCTCGCCATTCTGGCTTGAAATCGAGGCCTCAATCAACTTCATCACCCCAGAAACCAAATCCTGATATTTCGAAGATTCAACCAAGTTTCATATCCAACAAGAAGAGGTATCTGTCTCCTCTTCCCACCAGCAACCTCTCTGACGTTTTCAGGGAAGCAAAATCCGAGAGTAAGAGATTCTCAACACCAACTCCTCGTCTTAGAGAACAAACGAAGGAATTCAAGAACATGAACCCTCAAGTTTCTAAATCTGCCAATTTCAAGCCGTCTTTGAATACCAGTCCACTGAAACACCTAGTTACGGCAAAACGAGGTGATAAGTCAAAGCCCCGGAAGGACTCATCCTGGACCAAATATTTCGAGTCCGGTGGTGGAAGAGTCACCGCAGTCGAAACGGTTGATGACTGGAGTGTTGATCTCTCTGAGTTGTTTCTCGGGTTAAGGTTTGCTCATGGAGCTCACAGTCGTCTTTATCATGGAAAATACAAGGACAAACCTGTTGCTGTTAAAATTATTCGACAGCCTGAGGATGACGAAAATGGAGTTCTTGCTTCGAGATTGGAGAAGCAATTTACCAGAGAAGTTTCCCTTTTATCTCGTCTCAATCATCCGAACGTTTTAAAGTTTGTAGCTGCCTGTAGGAAGCCACCAGTTCACTGTGTCATTACCGAATATTTGTCTCAAGGATCATTAAGAGCATACTTGCACAAACTTGAGCACCAATCTCTTCCTATGCGAAAACTAATTGCAATGGCTTTAGATGTCGCTCATGGCATGGAATATATTCATTCACAAGGCGTAATTCATCGTGATCTTAAACCCGAAAATGTTCTTATTGACGAGGACTTCCACCTGAAAATTGCAGATTTTGGTATAGCTTGTCCTGATGCCTTTCTCGACCCATTGGCTGACGATCCTGGTACTTATCGATGGATGGCACCGGAGATGATTAAACATAAACCCTATGGTCGAAAGGTCGACGTGTACAGCTTCGGGCTTATGTTGTGGGAAATGGTGGCTGGTGCAATTCCTTACCAGGATATGACTCCCATTCAAGCAGCCTTTGCTGTTGTGAACAAGAATCTTAGGCCTGTTATCTCAAGTGATTGTACGTTGGCAATGCGAGCACTGATCGAGCAATGTTGGTCTGTAAATCCAGATAAGAGACCCGATTTCTGGCAGGTTGTGAAGGTATTAGAGAAATTCGAGTATTCGCTTGCCCATGATGGGACACTCAATTTAGTAGGAAATCCTCTGTCTAGTTTTCATCTAGACCATAAGAAAGGAGGGCCACTCCATTGGATTCAAAAGCTTGCCCCCCTACATCCTGAACCCTCACCCCGCCCCAAACCCAAATTCTCATGA | 1473 | 44.4 | MEKEANSWLRRTKFSHTVYHRWDSLRLTPVPFTIEPPRHSGLKSRPQSTSSPQKPNPDISKIQPSFISNKKRYLSPLPTSNLSDVFREAKSESKRFSTPTPRLREQTKEFKNMNPQVSKSANFKPSLNTSPLKHLVTAKRGDKSKPRKDSSWTKYFESGGGRVTAVETVDDWSVDLSELFLGLRFAHGAHSRLYHGKYKDKPVAVKIIRQPEDDENGVLASRLEKQFTREVSLLSRLNHPNVLKFVAACRKPPVHCVITEYLSQGSLRAYLHKLEHQSLPMRKLIAMALDVAHGMEYIHSQGVIHRDLKPENVLIDEDFHLKIADFGIACPDAFLDPLADDPGTYRWMAPEMIKHKPYGRKVDVYSFGLMLWEMVAGAIPYQDMTPIQAAFAVVNKNLRPVISSDCTLAMRALIEQCWSVNPDKRPDFWQVVKVLEKFEYSLAHDGTLNLVGNPLSSFHLDHKKGGPLHWIQKLAPLHPEPSPRPKPKFS | 490 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 7105612 | 7108627 | - | Cp4.1LG19g07180.1 | Cpe19g01019 | 486427 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe19g01019 | 490 | CDD | STKc_MAP3K-like | 186 | 435 | - | - | |
Cpe19g01019 | 490 | ProSiteProfiles | Protein kinase domain profile. | 179 | 438 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe19g01019 | 490 | SMART | serkin_6 | 179 | 441 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe19g01019 | 490 | Gene3D | Transferase(Phosphotransferase) domain 1 | 264 | 449 | - | - | |
Cpe19g01019 | 490 | Gene3D | Phosphorylase Kinase; domain 1 | 167 | 263 | - | - | |
Cpe19g01019 | 490 | PRINTS | Tyrosine kinase catalytic domain signature | 259 | 272 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe19g01019 | 490 | PRINTS | Tyrosine kinase catalytic domain signature | 297 | 315 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe19g01019 | 490 | PRINTS | Tyrosine kinase catalytic domain signature | 343 | 353 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe19g01019 | 490 | PRINTS | Tyrosine kinase catalytic domain signature | 362 | 384 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe19g01019 | 490 | PRINTS | Tyrosine kinase catalytic domain signature | 406 | 428 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe19g01019 | 490 | PANTHER | TYROSINE KINASE FAMILY PROTEIN | 4 | 462 | - | - | |
Cpe19g01019 | 490 | SUPERFAMILY | Protein kinase-like (PK-like) | 162 | 435 | IPR011009 | - | |
Cpe19g01019 | 490 | MobiDBLite | consensus disorder prediction | 117 | 133 | - | - | |
Cpe19g01019 | 490 | MobiDBLite | consensus disorder prediction | 117 | 151 | - | - | |
Cpe19g01019 | 490 | Pfam | Protein tyrosine and serine/threonine kinase | 185 | 435 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe19g01019 | 490 | MobiDBLite | consensus disorder prediction | 33 | 63 | - | - | |
Cpe19g01019 | 490 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 303 | 315 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe19g01019 | 490 | MobiDBLite | consensus disorder prediction | 42 | 63 | - | - | |
Cpe19g01019 | 490 | MobiDBLite | consensus disorder prediction | 136 | 151 | - | - | |
Cpe19g01019 | 490 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 4 | 462 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe19g01019 | Cpe-Chr19:7105612 | Cpe20g00236 | Cpe-Chr20:1347646 | 1.77E-113 | dispersed | |
Cpe10g00193 | Cpe-Chr10:1119287 | Cpe19g01019 | Cpe-Chr19:7105612 | 0 | wgd | |
Cpe19g01019 | Cpe-Chr19:7105612 | Cpe20g00437 | Cpe-Chr20:2510681 | 0 | wgd | |
Cpe19g01019 | Cpe-Chr19:7105612 | Cpe09g00837 | Cpe-Chr9:7723890 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63059 | PF07714 | PK_Tyr_Ser-Thr | 2.30E-60 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe19g01019 | - | - | csv:101204268 | 825.083 |