Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g01035 ATGGGCAGCGAGATCCGAAGTGAATCCGTGATTTCTATACTGGATCGGAGCTCCAAAAGAACCCGACTTCTATTTTTGGTTAACGATAAGGAGATATCTGAACACACACCAACGTTGCTCTCACGCGCCACTTACTTCGCTGGCGGCATTCCCAGTCTCCGCAAGTTGCACAGAGAGACCACCACCACTAACAACCACGTCGCCTTCGTCCACACCAGGCCCATCGCCGAGGGAGCCAACTTGATTTGGGGACGCCAATTGCGGCCGTCTCTGCTTCTCGATAACCTCTCGGCCAAACGGGAGACGGTTCGGCCTACCTATGCCGCAGCCTCCTCTTCTCCCGCGGGAGGTAGCGATTCTGCCGGGGAGGCGAAAGTTGCCCCGGCTGGTTTCTTCGAGAAGTATCCGGCGTTGGTCACCGGATTCTTCTTCTTCATGTGGTACTTTTTGAACGTGATTTTCAATATCCTCAACAAGAAGATCTATAATTACTTCCCCTATCCTTATTTTGTATCCGTGATCCATTTGTTGGTTGGGGTGGTGTACTGCTTGATAAGCTGGGTTGTGGGTCTCCCCAAGCGAGCGCCTATTGACTCAACACTCCTGAAGCTGCTGATCCCTGTAGCTTTCTGTCATGCACTTGGCCACGTCACTAGCAATGTCTCGTTCGCAGCTGTTGCTGTCTCATTCACACACACAATCAAAGCTTTGGAACCGTTCTTTAACGCCGCCGCTTCTCAATTCATTTTGGGGCAATCCATTCCCATTACCTTGTGGCTTTCATTGGCTCCCGTTGTCATTGGTGTGTCAATTGCATCTTTGACTGAGCTTTCATTCAACTGGACTGGCTTCATTAGTGCTATGATTTCTAATATCTCATTTACCTACAGAAGTATTTATTCAAAGAAAGCCATGACTGACATGGACAGCACCAACGTCTATGCCTATATCTCTATCATCGCTCTCCTTTTCTGCATTCCACCAGCTGTAATTGTGGAGGGGCCTCAACTGCTGAAGTTTGGTTTCAATGATGCCATAGCTAAAGTCGGTCTAACCAAATTCGTCTCAGATCTCTTCTGGGTGGGAATGTTTTATCACCTTTACAATCAGTTAGCAACCAACACACTGGAGAGGGTGGCACCACTTACCCATGCAGTTGGAAATGTGCTGAAACGTGTATTTGTGATTGGATTCTCCATCATTGTCTTTGGTAACAAAATTTCAACACAGACTGGTATTGGAACCTGCATTGCAATAGCAGGAGTTGCACTTTACTCTTTCATCAAGGCTAAGATGGAAGAAGAGAAACGAGGAAGAACTGGAGCTAAAAGAATTAAAGAAAGTAAGGAGAATTATGGAAGGGTTTGGGTGTTCTTCTGTGTTTTCTTCTATTCTTTTCTCCGATCTTCACCTTCTAATTCGATGGAAGCTGCTGCTTCCGACGGCGGAAATCACAACCTGAATAATGATAATATTAACAAAATTAGTAACTCAAGTGAGGGTCTGAGCAGGCCCAAGCGCCAGATGAAGACTCCATTTCAGCTGGAAACCCTCGAGAAGGCCTTTGCTTTGGAGACATATCCATCAGAGTCGACGAGGGCTGAACTGTCGGAGAAATTGGGGCTCACCGATCGGCAATTGCAGATGAGGTTGAAAGACAAGAAGGAACCGGCGAAGAAACCACGAAATGTGGTACCGGCGTTGCCTGATTCTCCCATTGACGAATTGAGAGTGGTAGCCGAGCCGGGTAGTGATTACGCTTCAGGGTCGGGCTCGGGTTCAAGTCCATTCGGAGATGTTGGGCTGCATAATGTGGCGTCTGGAAGTGGTGGAGACGATATGCTGATGACGAGAAGGTATTACGAACCTTCAAGGTCCATTATGGAACTTAGAGCCATTGCTTGTGTGGAGTCGCAGTTAGGCGAGCCATTGAGGGAGGACGGACCTATTATTGGGATTGAATTTGATTCATTACCACCTGATGCTTTCGGAGCACCTCTAGTGGCTGAACAGCAGAAGCGATCTGGACATTTGTATGGGGACAAATATGATCAGCGGGATGCAAAATCAAATAAAGCAACTGCAAGGGCATTCCCGGAATATCCATTTATGCCAGACCAGTCTAGAATTAGAGCTGATGCTTATGGACCAGTTGCCCAATCACATTATCCAGATTCATTAGTCGAGGTTTCAGCAGCCAGGACTCCATTTTTGCTTGGTCGTGAACAGTTGAATAGGAGCCATAATTATCATGGTCAGGTCTCAAGGGTTCGTCTTCTGTCTCAACAGGAGCAGCAAGGAGTTGCAGTTCCATCTCCTGCCGATGATAACACATTTGTTCCTGCAAGTATCAGGAATCCAATGGTTGTACAAGAAGATTCGTATATGTTACCTGATGGGCAAGTTTTCCCAAATGATGTCATCATTAGGATGGAAAGAAAACGCAAGAGTGAAGAAGCTCGTCTGAACAAAGAAGCTGAAGCCCATGAAATAAGAATGCGAAAAGAGCTTGAGAAACAAGACAATTTGAGGAAAAAGAGTGAAGAGCGAATGAGGAAAGAAATGGAAAAGCAAGATCGTGAAAGAAGGAAAGAAGAGGAGAGGTTACAGCGAGAAAAACAGCGAGAAGTAGAAAGGTTGAAGCGTGAGGAAAGACGTGAACTTGAACGGAGGGAAAAGTTTCTGCAGAGGGAGTATTTGAGGGCTGAGAAGAGGAGGCAAAAAGAAGCTATTCGCAAGGAAAAGGAAGCAGTGAGACGCAAAGCTGCTATTGAGAAGGCTACTGCACGTAGAATTGCTCGTGAGTCTATGGAACTTATTGAGGATGAACAGCTTGAACTGATGGAAATAGCAGCTGCAAACAAAGGATTATCCTCCATATTAAGTCTTGATCACGACACTTTGCAGAATCTCGAGTCTTTCCGAGAGGAGAACATTGGTAACCTTCTCATGGTCTGGAGATTTTTTATTACATTTTCTGATGTTCTAGAGCTATGGCCCTTTACTCTTGATGAGTTTGTTCAAGCTCTTCATGACTATGATTCAAGATTACTGGGTGAGATTCACATTTGTCTTCTGAGACTGATTGTAAAAGATATTGAAGATGTTGCAAGAACACCTTCTGCAGGATTGGGAATGAATCAGAATGGTGTTGCCAACACTGGAGGTGGACATCCACAAATTGTTGAAGGGGCATATGCGTGGGGGTTTGACATTTGCAACTGGCAGAAACATTTAAACCCATTAACATGGCCTGAAATATTTCGACAACTAGCATTATCAGCTGGATTTGGACCTCAGTTAAAGAGGAGTTTGGCATGGTCTGAAATGCGTAGCAATGATGAGGCTAAATGTGGTGAGGATGTAGTTTCTACTCTTCGCAATGGTTCAGCAGCTGAAAATGCATTTTCTATCATGCAAGAGAAGGGTTTGTTAGCTCCTCGAAGATCTAGGCATCGGCTCACTCCTGGAACTGTCAAATTTGCTGCTTTCCATGTCCTTTCACTAGAAGGCAGTCAGGGGTTAACAGTACTAGAACTTGCAGAGAAGATACAGAGATCTGGACTTAGAGATCTGTCTACAAGCAGAACACCAGAGGCTTCTATTTCTGTTGCTTTGACGAGGGATACTAAGCTTTTTGAAAGAATAGCTCCTTCTACATATCGTAATGAGATTGCCAAAAATATACCATCGTCTCCCCTAAGTGGCTCCAAGGACACAAAATATTTAAATATACCTACAGAGCAACATGCTGCTGTTGATGGGACTACTGTTACTGATCTTGATCAAGAAAATATGGAGATTGATGAGAGCAAGGAAGGTGAATCATGGATTCAAGGACTTACAGAAGGTGAATATCATGATCTTAGTGTTGAGGAGCGGTTGAATGCCCTTATCGCCTTAACCAGCATCGCAAATGAAGGAAACTCAATTCGCCTTGTTCTTGAGGATCGCTTGGAAGCCGCGAATGCTGTCAAGAAGCAAATGTTGGCAGAGGCTCAGATTGATAAATCTCGCCTGAAAGAAGATATCATTACTAAATCAGATTTTCCAATGCACATTGTGAGCAAGGTGGAAACTGAACTCAATGGTTCCGCTATGGAGGATGGCCAAAGCCCTTTTCCTGTTGCTGACAATCAGAACAATGAAACAACCCTTAGCACTGCAGAAAACCTCGGTAGTGTGCCTAATGAGAGGGCTACTTTAGTGCCAGATTTTTTCCCAGTCCCAGATAACTTTTTGGCTCAACAATGTGGACATGCTTCAAAGAGGTCACGTTCACAGTTAAAATCTTATATTGCCCACAGAGCAGAAGAAATGTACACTTACAGGTCCTTGCCTCTAGGTCGAGATCGTAGGCGTAATCGATACTGGCAATTTGTTGCATCTTCTTCAAGCAATGATCCTGGTTCTGGGAGAATCTTTGTAGAAATGTATGATGGAAAATGGATGCTTATTGATTCTGAAGAGGGCTTTGATGCTCTTTCAATGGCTTTGGACACACGTGGGGTTAGAGAATCACACCTACGCATAATGTTGCAAATGATAGAGACATCATTTAAGGAAAATGTTCGGAGGAATCTGCAGTGTGTCAATGTGATGGTTCAAAGTCAAATTACTCCTAAAAATGAAAACGATGAATCGAGCTCTAGTCCTGATTGCAATGCCAGTTTTAACAGTCCTAGCAGCACTGTTTGCGGTTTAAATTTGGATACAACGATAACATCATCTTCATTTAGAATTGAGCTCGGGAGAAATGAAAATGAAAAGAAGGCTGCATTTAGAAGGTATCAAGACTTGCAGAGGTGGATGTTAAGAGAGTGCTTTAGCACATCAACATTATGTGCCATGGAGTTTGGAGAAAAAAGGTGCAGGCCGCTGTTGGACATTTGCGATTCTTGTCTGTGCTTGTTTGATTCTCAACATTCTCACTGCTCTTCATGCCATCAAACTTATGGCACTAGTGAGAACGATACTAATTTTCTGGAACACGAATGTCACTGTACGAGGGAAAGGAAGTCTTACCATTGGGATACACATGCATTAGATGCATCTCTTCCCCTCAAAAGTAGATTACTCAAGGCCCTCTTAGCTTTCATTGAGGTACATGTTCCTTCAGAAGCTTTTCAATTGTTTTGGACAGAACAAAGGAAAGATTGGGGTGTCAGGATGAAATTATCTTCAACTATTGAGGAGCTACTACAGATTTTGACCCTGTTTGAAAGTGTAATTAAGCGAGACTTCCTAAAATCAGACTTTACTACAACAGACGAACACCTGAGCTCATGTTCTATCTCTAGGAATGTTATACGTGACGCAGCAGATGTTGGGTCTGTTCTTACATTACCATGGATTCCACGGACTAGTGCAGCTGTTGCTTTAAGGCTTTGTGAGATAGATGTATCAATTTATTATATCGGGTGTGAGAAACCAGAGCCTGACCAGTATAAGGAAATCGGAGAACATGTAAACTTTCCCAGTAGATTTGTCCAGATTAAGAATGAAAACGAACTGGACTATGATGGTCTAATGAAGCAAGAAAACTTGGCTGATCCAAAAAGTTTAAGGAACAGCTACAAACGTGGTCGAAGGAGTCGAGATTATGGACGTCGTAAAAGGTGGCAGAAAAAAGTTAATGGTTCCAAATCTAGCCATGTCCGGCCAAATGTGAAGAGTAATGAGAAGATGAATGAAGAACAGAGGGAACTGGGACAAGGTATGCAGGTTTTGGGGGTACGGGGTCGCCGTACTGTAAGGAAGCGAAGGGCTGAGAATAGCATTCCAGATGAAGGATTGTTGGGGCTCGTGCCTAGTAGTAGTACTCAGAATATAGATGAATCTCCAAAAGACTATATTGGGGAATGGGAGGATGAAAAAATGGATAGGTTCGTGGATATGGAAGATGATGAGAACGTGATGGAAGATGAAGAGAACGAAGAGGATGAAGAGAATGTAAACAACGTAGAACCAATGGACTCAGACGAGGATGCGCAGGAAGTTGGATATGAGCAAGGGAGTTGGGAGTATGGTATTGACAATGGCACCTCCAACAGATGGAATGGTGATTTAAGGGTGGCTAGTGATGAGGAGGATGTGGAGTTATCTGAGGACTACAATGGCACTGAAGAGGGTGGAAATGATTTTGGGGAGGAAGAGTTAGATGATGATACGAGCGTGGAGTCGGATTGTTCACCAAATAGGATAGTAGGCAATAACGGTGGAAGAGAATCCCCTGTTTCCGACGATTATAGTGATTAA 6258 44.02 MGSEIRSESVISILDRSSKRTRLLFLVNDKEISEHTPTLLSRATYFAGGIPSLRKLHRETTTTNNHVAFVHTRPIAEGANLIWGRQLRPSLLLDNLSAKRETVRPTYAAASSSPAGGSDSAGEAKVAPAGFFEKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLLVGVVYCLISWVVGLPKRAPIDSTLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSIASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALLFCIPPAVIVEGPQLLKFGFNDAIAKVGLTKFVSDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTCIAIAGVALYSFIKAKMEEEKRGRTGAKRIKESKENYGRVWVFFCVFFYSFLRSSPSNSMEAAASDGGNHNLNNDNINKISNSSEGLSRPKRQMKTPFQLETLEKAFALETYPSESTRAELSEKLGLTDRQLQMRLKDKKEPAKKPRNVVPALPDSPIDELRVVAEPGSDYASGSGSGSSPFGDVGLHNVASGSGGDDMLMTRRYYEPSRSIMELRAIACVESQLGEPLREDGPIIGIEFDSLPPDAFGAPLVAEQQKRSGHLYGDKYDQRDAKSNKATARAFPEYPFMPDQSRIRADAYGPVAQSHYPDSLVEVSAARTPFLLGREQLNRSHNYHGQVSRVRLLSQQEQQGVAVPSPADDNTFVPASIRNPMVVQEDSYMLPDGQVFPNDVIIRMERKRKSEEARLNKEAEAHEIRMRKELEKQDNLRKKSEERMRKEMEKQDRERRKEEERLQREKQREVERLKREERRELERREKFLQREYLRAEKRRQKEAIRKEKEAVRRKAAIEKATARRIARESMELIEDEQLELMEIAAANKGLSSILSLDHDTLQNLESFREENIGNLLMVWRFFITFSDVLELWPFTLDEFVQALHDYDSRLLGEIHICLLRLIVKDIEDVARTPSAGLGMNQNGVANTGGGHPQIVEGAYAWGFDICNWQKHLNPLTWPEIFRQLALSAGFGPQLKRSLAWSEMRSNDEAKCGEDVVSTLRNGSAAENAFSIMQEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSQGLTVLELAEKIQRSGLRDLSTSRTPEASISVALTRDTKLFERIAPSTYRNEIAKNIPSSPLSGSKDTKYLNIPTEQHAAVDGTTVTDLDQENMEIDESKEGESWIQGLTEGEYHDLSVEERLNALIALTSIANEGNSIRLVLEDRLEAANAVKKQMLAEAQIDKSRLKEDIITKSDFPMHIVSKVETELNGSAMEDGQSPFPVADNQNNETTLSTAENLGSVPNERATLVPDFFPVPDNFLAQQCGHASKRSRSQLKSYIAHRAEEMYTYRSLPLGRDRRRNRYWQFVASSSSNDPGSGRIFVEMYDGKWMLIDSEEGFDALSMALDTRGVRESHLRIMLQMIETSFKENVRRNLQCVNVMVQSQITPKNENDESSSSPDCNASFNSPSSTVCGLNLDTTITSSSFRIELGRNENEKKAAFRRYQDLQRWMLRECFSTSTLCAMEFGEKRCRPLLDICDSCLCLFDSQHSHCSSCHQTYGTSENDTNFLEHECHCTRERKSYHWDTHALDASLPLKSRLLKALLAFIEVHVPSEAFQLFWTEQRKDWGVRMKLSSTIEELLQILTLFESVIKRDFLKSDFTTTDEHLSSCSISRNVIRDAADVGSVLTLPWIPRTSAAVALRLCEIDVSIYYIGCEKPEPDQYKEIGEHVNFPSRFVQIKNENELDYDGLMKQENLADPKSLRNSYKRGRRSRDYGRRKRWQKKVNGSKSSHVRPNVKSNEKMNEEQRELGQGMQVLGVRGRRTVRKRRAENSIPDEGLLGLVPSSSTQNIDESPKDYIGEWEDEKMDRFVDMEDDENVMEDEENEEDEENVNNVEPMDSDEDAQEVGYEQGSWEYGIDNGTSNRWNGDLRVASDEEDVELSEDYNGTEEGGNDFGEEELDDDTSVESDCSPNRIVGNNGGRESPVSDDYSD 2085
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7167860 7185531 - Cp4.1LG19g06980.1 Cpe19g01035 486443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g01035 2085 SUPERFAMILY Multidrug resistance efflux transporter EmrE 182 275 - -
Cpe19g01035 2085 SUPERFAMILY Homeodomain-like 494 555 IPR009057 -
Cpe19g01035 2085 Pfam DDT domain 977 1032 IPR018501 -
Cpe19g01035 2085 MobiDBLite consensus disorder prediction 475 507 - -
Cpe19g01035 2085 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT1 478 1222 - -
Cpe19g01035 2085 SUPERFAMILY Multidrug resistance efflux transporter EmrE 356 427 - -
Cpe19g01035 2085 Pfam Triose-phosphate Transporter family 139 426 IPR004853 -
Cpe19g01035 2085 Pfam HB1, ASXL, restriction endonuclease HTH domain 1157 1222 IPR007759 GO:0006355
Cpe19g01035 2085 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT1 1244 2085 - -
Cpe19g01035 2085 Pfam Homeodomain 504 548 IPR001356 GO:0003677
Cpe19g01035 2085 MobiDBLite consensus disorder prediction 835 879 - -
Cpe19g01035 2085 ProSiteProfiles DDT domain profile. 976 1035 IPR018501 -
Cpe19g01035 2085 SMART HOX_1 503 560 IPR001356 GO:0003677
Cpe19g01035 2085 MobiDBLite consensus disorder prediction 2029 2059 - -
Cpe19g01035 2085 MobiDBLite consensus disorder prediction 1969 2001 - -
Cpe19g01035 2085 MobiDBLite consensus disorder prediction 2062 2085 - -
Cpe19g01035 2085 MobiDBLite consensus disorder prediction 1969 2085 - -
Cpe19g01035 2085 Coils Coil 808 921 - -
Cpe19g01035 2085 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1444 1514 IPR028941 -
Cpe19g01035 2085 CDD homeodomain 504 556 IPR001356 GO:0003677
Cpe19g01035 2085 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 478 1222 IPR044977 GO:0006357
Cpe19g01035 2085 MobiDBLite consensus disorder prediction 1849 1901 - -
Cpe19g01035 2085 SMART testlast3 976 1035 IPR018501 -
Cpe19g01035 2085 MobiDBLite consensus disorder prediction 1863 1880 - -
Cpe19g01035 2085 MobiDBLite consensus disorder prediction 1929 1948 - -
Cpe19g01035 2085 ProSiteProfiles HARE-type HTH domain profile. 1157 1226 IPR007759 GO:0006355
Cpe19g01035 2085 MobiDBLite consensus disorder prediction 475 505 - -
Cpe19g01035 2085 MobiDBLite consensus disorder prediction 1541 1561 - -
Cpe19g01035 2085 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 138 436 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cpe19g01035 2085 ProSiteProfiles 'Homeobox' domain profile. 501 561 IPR001356 GO:0003677
Cpe19g01035 2085 Coils Coil 1966 1986 - -
Cpe19g01035 2085 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1273 1313 IPR028942 -
Cpe19g01035 2085 Gene3D - 503 560 - -
Cpe19g01035 2085 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1244 2085 IPR044977 GO:0006357
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02339 Cpe-Chr1:19640910 Cpe19g01035 Cpe-Chr19:7167860 6.80E-35 dispersed
Cpe06g00755 Cpe-Chr6:4760524 Cpe19g01035 Cpe-Chr19:7167860 3.26E-74 dispersed
Cpe10g00791 Cpe-Chr10:4499191 Cpe19g01035 Cpe-Chr19:7167860 8.71E-70 dispersed
Cpe15g00721 Cpe-Chr15:7600111 Cpe19g01035 Cpe-Chr19:7167860 1.78E-117 dispersed
Cpe19g00971 Cpe-Chr19:6847618 Cpe19g01035 Cpe-Chr19:7167860 8.29E-77 dispersed
Cpe01g01650 Cpe-Chr1:10176380 Cpe19g01035 Cpe-Chr19:7167860 2.08E-58 transposed
Cpe09g00218 Cpe-Chr9:1251609 Cpe19g01035 Cpe-Chr19:7167860 0 transposed
Cpe10g00176 Cpe-Chr10:1037390 Cpe19g01035 Cpe-Chr19:7167860 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51054 PF03151 TPT 1.00E-108 CL0184 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g01035 - - cmo:103484497 1386.7