Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe19g01043 ATGGGGAAGCATTCGAAGACCAGTTGCAAGTCGGCTTCCCACAAGCTCTTTAAGGATAAGGCAAAGAACCGGGTCGATGATCTGCAAAGCATATTTGTAGATTTGCAATATGCAAGGAAAGAGAGCCGCAATGTTGATGTGGCAGTGCTCGAGGAACAAGTCCATCAGATGCTTCGTGAGTGGAAAGCAGAGCTGAACGAGCCCTCTCCAGCATCCTCTTTGCAACAAGGTGGAAGCCTTGGGTCATTTTCATCGGACATTTGTCGATTGCTACAACTTTGCGAGGAGGATGATGATGCATCTAGTCCATTAGCTGCTCCTAAACCAGAACCCAATGAACAAAATCTGCAGGTTGGAGATACTATGGCAGTTCAAGAGGGATTTAACGTGAATCGTGTACACCAAGAACCAAGCTTCCCTCTAGTTGATCAGTGCAAGAACTCCCCTTCAGGAGTTCATGGTTTGGCTATGAATAACTTGGAAGGAGCCACATATTTGGAGTGTCATCAGCTTGATTTACATCAAGGCAGTGAACACAACTTTTACTCCTTCCTTAATGGTAGAGGTTTGTGTGGGGAGAGTGAAATTCCTCATGTTTCCAGCTATTGTCCCAGCATATGTCCTCCACCTGCTGCTTTCTTAGGCCCAAAATGTGCGCTTTGGGATTGCCCACGACCTGCCCAAGGGTTGGATTGGTGTGAGGATTACTGCAGCAGTTTTCATGCTGCCTTAGCATTGAATGAAGGCCCTCCTGGAATGGGTCCAGTTTTACGACCTGGTGGCATTGGTCTGAAGGATGGTTTGCTTTTTGCTGCTCTTAGTACGAAGGCACAAGGAAAAGATGTTGGTATCCCTGAATGTGAGGGAGCTGCCACGGCTAAATCCCCTTGGAATGCTCCTGAGCTATTTGATCTGTCAATATTGGAGGGTGAGATGATTAGGGAGTGGCTTTTCTTTGACAAGCCTCGTAGAGCATTTGAGAGTGGGAATAGGAAGCAGAGGTCATTGCCAGATTATAGTGGACGTGGTTGGCATGAGTCAAGAAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAAAGATCTTATTACATGGATCCTCAGCCATTGAACCACTTTGAGTGGCATCTTTATGAATATGAAATCAATAAGTATGATGCCTGCGCTTTGTATAGATTGGAGTTGAAACTCGTTGATGGGAAAAAAAGTTCCAAGGCGAAGGTAACAAATGATTCGGTTGCCGATTTACAGAGACAAATGGGGAGACTGGCTGCTGAGTTTCCTGATAATAAACGCTTTATGAAGGGGAGGACCAAAATTAACACAAAAGTTGGTGTTGGAAATGTATACTCATCAGCAAATAGAGTCATGCCACCCAATGGAACATATGATTATATGCTTCATGCACAATATGATTACCTTGTGGAGAATTTGAGCGAATATTACCTTACGTAG 1452 44.77 MGKHSKTSCKSASHKLFKDKAKNRVDDLQSIFVDLQYARKESRNVDVAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSSDICRLLQLCEEDDDASSPLAAPKPEPNEQNLQVGDTMAVQEGFNVNRVHQEPSFPLVDQCKNSPSGVHGLAMNNLEGATYLECHQLDLHQGSEHNFYSFLNGRGLCGESEIPHVSSYCPSICPPPAAFLGPKCALWDCPRPAQGLDWCEDYCSSFHAALALNEGPPGMGPVLRPGGIGLKDGLLFAALSTKAQGKDVGIPECEGAATAKSPWNAPELFDLSILEGEMIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKYDACALYRLELKLVDGKKSSKAKVTNDSVADLQRQMGRLAAEFPDNKRFMKGRTKINTKVGVGNVYSSANRVMPPNGTYDYMLHAQYDYLVENLSEYYLT 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 7214459 7218364 + Cp4.1LG19g07060.1 Cpe19g01043 486451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe19g01043 483 PANTHER TRANSCRIPTION FACTOR VOZ1 1 483 - -
Cpe19g01043 483 PANTHER TRANSCRIPTION FACTOR VOZ1 1 483 IPR039277 GO:0006355|GO:0048578
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00166 Cpe19g01043 CCT
Cpe10g00166 Cpe19g01043 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01419 Cpe-Chr5:9943729 Cpe19g01043 Cpe-Chr19:7214459 1.03E-173 dispersed
Cpe16g00412 Cpe-Chr16:5578409 Cpe19g01043 Cpe-Chr19:7214459 2.21E-177 dispersed
Cpe10g00166 Cpe-Chr10:993139 Cpe19g01043 Cpe-Chr19:7214459 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51057 None None None None Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe19g01043 - - csv:101219536 943.34